General Information of Drug Therapeutic Target (DTT) (ID: TT6X50U)

DTT Name Matrix metalloproteinase-9 (MMP-9)
Synonyms Matrix metalloproteinase 9; GELB; CLG4B; 92 kDa type IV collagenase; 92 kDa gelatinase
Gene Name MMP9
DTT Type
Clinical trial target
[1]
Related Disease
Ischaemic/haemorrhagic stroke [ICD-11: 8B20]
Solid tumour/cancer [ICD-11: 2A00-2F9Z]
Stomach cancer [ICD-11: 2B72]
Ulcerative colitis [ICD-11: DD71]
BioChemical Class
Peptidase
UniProt ID
MMP9_HUMAN
TTD ID
T54156
3D Structure
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2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
EC Number
EC 3.4.24.35
Sequence
MSLWQPLVLVLLVLGCCFAAPRQRQSTLVLFPGDLRTNLTDRQLAEEYLYRYGYTRVAEM
RGESKSLGPALLLLQKQLSLPETGELDSATLKAMRTPRCGVPDLGRFQTFEGDLKWHHHN
ITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYP
FDGKDGLLAHAFPPGPGIQGDAHFDDDELWSLGKGVVVPTRFGNADGAACHFPFIFEGRS
YSACTTDGRSDGLPWCSTTANYDTDDRFGFCPSERLYTQDGNADGKPCQFPFIFQGQSYS
ACTTDGRSDGYRWCATTANYDRDKLFGFCPTRADSTVMGGNSAGELCVFPFTFLGKEYST
CTSEGRGDGRLWCATTSNFDSDKKWGFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMY
PMYRFTEGPPLHKDDVNGIRHLYGPRPEPEPRPPTTTTPQPTAPPTVCPTGPPTVHPSER
PTAGPTGPPSAGPTGPPTAGPSTATTVPLSPVDDACNVNIFDAIAEIGNQLYLFKDGKYW
RFSEGRGSRPQGPFLIADKWPALPRKLDSVFEERLSKKLFFFSGRQVWVYTGASVLGPRR
LDKLGLGADVAQVTGALRSGRGKMLLFSGRRLWRFDVKAQMVDPRSASEVDRMFPGVPLD
THDVFQYREKAYFCQDRFYWRVSSRSELNQVDQVGYVTYDILQCPED
Function
Could play a role in bone osteoclastic resorption. Cleaves KiSS1 at a Gly-|-Leu bond. Cleaves type IV and type V collagen into large C-terminal three quarter fragments and shorter N-terminal one quarter fragments. Degrades fibronectin but not laminin or Pz-peptide. May play an essential role in local proteolysis of the extracellular matrix and in leukocyte migration.
KEGG Pathway
TNF signaling pathway (hsa04668 )
Leukocyte transendothelial migration (hsa04670 )
Estrogen signaling pathway (hsa04915 )
Hepatitis B (hsa05161 )
Pathways in cancer (hsa05200 )
Transcriptional misregulation in cancer (hsa05202 )
Proteoglycans in cancer (hsa05205 )
MicroRNAs in cancer (hsa05206 )
Bladder cancer (hsa05219 )
Reactome Pathway
Degradation of the extracellular matrix (R-HSA-1474228 )
Activation of Matrix Metalloproteinases (R-HSA-1592389 )
Assembly of collagen fibrils and other multimeric structures (R-HSA-2022090 )
EPH-ephrin mediated repulsion of cells (R-HSA-3928665 )
Collagen degradation (R-HSA-1442490 )

Molecular Interaction Atlas (MIA) of This DTT

Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DTT
6 Clinical Trial Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
Andecaliximab DMLDB1X Gastric adenocarcinoma 2B72 Phase 3 [2]
Curcumin DMQPH29 Solid tumour/cancer 2A00-2F9Z Phase 3 [1]
DP-b99 DM97S10 Stroke 8B20 Phase 3 [3]
GS-5745 DMP8MDW Gastric adenocarcinoma 2B72 Phase 3 [4]
BLZ-100 DMFKA4G Glioma 2A00.0 Phase 1/2 [5]
Neovastat DMXTYWJ Non-small-cell lung cancer 2C25.Y Phase 1 [6], [7], [8]
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⏷ Show the Full List of 6 Clinical Trial Drug(s)
8 Patented Agent(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
PMID29130358-Compound-Figure13(4) DMDFPIO N. A. N. A. Patented [9]
PMID29130358-Compound-Figure17(10) DMVA15O N. A. N. A. Patented [9]
PMID29130358-Compound-Figure17(11) DMSZA9L N. A. N. A. Patented [9]
PMID29130358-Compound-Figure17(12) DMML4PA N. A. N. A. Patented [9]
PMID29130358-Compound-Figure17(13) DM2QRIW N. A. N. A. Patented [9]
PMID29130358-Compound-Figure18(14a) DMHIBTZ N. A. N. A. Patented [9]
PMID29130358-Compound-LonimacranthoideVII DMOGIAU N. A. N. A. Patented [9]
PMID29130358-Compound-SB-3CT DMC64XQ N. A. N. A. Patented [9]
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⏷ Show the Full List of 8 Patented Agent(s)
7 Discontinued Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
Galarubicin DMTNYSF Solid tumour/cancer 2A00-2F9Z Discontinued in Phase 2 [10]
GM6001 DM7V9CT Corneal ulcer 9A76 Discontinued in Phase 2 [11]
RS-130830 DMOTANY Hepatitis C virus infection 1E51.1 Discontinued in Phase 2 [12]
CDP-845 DMGMS2D Solid tumour/cancer 2A00-2F9Z Terminated [14]
CT-1746 DM84KOY Colorectal cancer 2B91.Z Terminated [15]
RO-319790 DML3NEU Rheumatoid arthritis FA20 Terminated [16]
SC-44463 DMBPNKT N. A. N. A. Terminated [17]
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⏷ Show the Full List of 7 Discontinued Drug(s)
1 Preclinical Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
DX-2802 DM8YSW7 Solid tumour/cancer 2A00-2F9Z Preclinical [13]
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34 Investigative Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
(+/-)5-(biphenyl-4-yl)-3-hydroxypentanoic acid DMSN7GJ Discovery agent N.A. Investigative [18]
2-(4'-chloro-biphenyl-4-sulfonyl)-pentanoic acid DMQAVM4 Discovery agent N.A. Investigative [19]
2-(biphenyl-4-ylsulfonamido)pentanedioic acid DMH3YBR Discovery agent N.A. Investigative [20]
2-(Biphenyl-4-ylsulfonyl)N-hydroxybenzamide DMCNV5J Discovery agent N.A. Investigative [21]
2-Amino-N,3,3-Trimethylbutanamide DM3YI9P Discovery agent N.A. Investigative [22]
3-(4-(2-phenylethynyl)benzoyl)pentanoic acid DMQDPHT Discovery agent N.A. Investigative [23]
3-(4-Phenylethynylbenzoyl)nonanoic acid DMXL0J5 Discovery agent N.A. Investigative [23]
4-amino-3-(4-(hexyloxy)phenyl)-4-oxobutanoic acid DMGI0YV Discovery agent N.A. Investigative [20]
5-(4-Phenoxy-phenyl)-pyrimidine-2,4,6-trione DM05OMF Discovery agent N.A. Investigative [24]
5-Biphenyl-4-yl-5-ethyl-pyrimidine-2,4,6-trione DMFAITE Discovery agent N.A. Investigative [24]
5-Biphenyl-4-yl-5-hexyl-pyrimidine-2,4,6-trione DMI2PXO Discovery agent N.A. Investigative [24]
5-Hexyl-5-phenyl-pyrimidine-2,4,6-trione DM4S86L Discovery agent N.A. Investigative [24]
5-Methyl-5-phenyl-pyrimidine-2,4,6-trione DMRMKXD Discovery agent N.A. Investigative [24]
ARP100 DM6KQXF Discovery agent N.A. Investigative [25]
Carboxylated glucosamine DM105YR Discovery agent N.A. Investigative [26]
Folate gamma-hydroxamic acid DMJ4F3Q Discovery agent N.A. Investigative [27]
IK-862 DMJA4UE Discovery agent N.A. Investigative [28]
Methotrexate gamma-hydroxamic acid DM8P526 Discovery agent N.A. Investigative [27]
Methotrexate gamma-L-phenylalaninehydroxamic acid DMELK2A Discovery agent N.A. Investigative [27]
Methotrexate gamma-L-proline-hydroxamic acid DMPYJLA Discovery agent N.A. Investigative [27]
MMI270 DM38N2K Discovery agent N.A. Investigative [29]
N-hydroxy-2,3-bis(phenylsulfonamido)propanamide DMZWIVJ Discovery agent N.A. Investigative [30]
N-Hydroxy-2-(4-phenoxy-benzenesulfonyl)benzamide DM4VADN Discovery agent N.A. Investigative [21]
N-hydroxy-3-(2-oxo-2H-chromen-3-yl)propanamide DMWXUCT Discovery agent N.A. Investigative [31]
N-hydroxy-3-(6-methoxy-2-oxo-2H-chromen-3-yl) DMA6EPH Discovery agent N.A. Investigative [31]
PMID15055993C1a DM9V6YK Discovery agent N.A. Investigative [32]
PMID23631440C29e DMM92IB Discovery agent N.A. Investigative [33]
Ro 28-2653 DMDC4HY Discovery agent N.A. Investigative [34]
Ro-37-9790 DM83QMZ Discovery agent N.A. Investigative [35]
Roche 28-2653 DMD4JHK Discovery agent N.A. Investigative [34]
SL422 DM3I2US Discovery agent N.A. Investigative [36]
SR-973 DMU48OD Discovery agent N.A. Investigative [37]
UK-356618 DM02FGH Discovery agent N.A. Investigative [38]
[2-(Biphenyl-4-sulfonyl)phenyl]acetic Acid DM37C25 Discovery agent N.A. Investigative [21]
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⏷ Show the Full List of 34 Investigative Drug(s)

Molecular Expression Atlas (MEA) of This DTT

Molecular Expression Atlas (MEA) Jump to Detail Molecular Expression Atlas of This DTT
Disease Name ICD 11 Studied Tissue p-value Fold-Change Z-score
Renal cancer 2C82 Kidney 1.12E-10 1.15 3.45
Lung cancer 2C82 Lung tissue 3.53E-54 2.03 1.94
Rheumatoid arthritis FA20 Synovial tissue 7.66E-05 0.81 1.83
Ovarian cancer 2C82 Ovarian tissue 1.15E-07 1.57 3.98
Osteoarthritis FA20 Synovial tissue 2.59E-01 0.11 0.25
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The Drug-Metabolizing Enzyme (DME) Role of This DTT

DTT DME Name Matrix metalloproteinase-9 (MMP-9) DME Info
Gene Name MMP9
1 Approved Drug(s) Metabolized by This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
Amylin DMWDEN0 N. A. N. A. Phase 4 [39]
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References

1 Synthesis and biological evaluation of curcuminoid pyrazoles as new therapeutic agents in inflammatory bowel disease: effect on matrix metalloprote... Bioorg Med Chem. 2009 Feb 1;17(3):1290-6.
2 Clinical pipeline report, company report or official report of the Pharmaceutical Research and Manufacturers of America (PhRMA)
3 DP-b99 modulates matrix metalloproteinase activity and neuronal plasticity. PLoS One. 2014 Jun 11;9(6):e99789.
4 National Cancer Institute Drug Dictionary (drug id 747683).
5 Antibodies and venom peptides: new modalities for ion channels. Nat Rev Drug Discov. 2019 May;18(5):339-357.
6 Neovastat, a naturally occurring multifunctional antiangiogenic drug, in phase III clinical trials. Semin Oncol. 2001 Dec;28(6):620-5.
7 Neovastat (AE-941) inhibits the airway inflammation and hyperresponsiveness in a murine model of asthma. J Microbiol. 2005 Feb;43(1):11-6.
8 The effect of Neovastat (AE-941) on an experimental metastatic bone tumor model. Int J Oncol. 2002 Feb;20(2):299-303.
9 Gelatinase inhibitors: a patent review (2011-2017).Expert Opin Ther Pat. 2018 Jan;28(1):31-46.
10 Inhibitory effect of DA-125, a new anthracyclin analog antitumor agent, on the invasion of human fibrosarcoma cells by down-regulating the matrix m... Biochem Pharmacol. 2005 Dec 19;71(1-2):21-31.
11 Introduction of the 4-(4-bromophenyl)benzenesulfonyl group to hydrazide analogs of Ilomastat leads to potent gelatinase B (MMP-9) inhibitors with i... Bioorg Med Chem. 2008 Sep 15;16(18):8745-59.
12 Structure-based design of potent and selective inhibitors of collagenase-3 (MMP-13). Bioorg Med Chem Lett. 2005 Feb 15;15(4):1101-6.
13 Clinical pipeline report, company report or official report of DeepDyve.
14 Clinical potential of matrix metalloprotease inhibitors. Drugs R D. 1999 Feb;1(2):117-29.
15 Conversion of highly malignant colon cancer from an aggressive to a controlled disease by oral administration of a metalloproteinase inhibitor. Clin Exp Metastasis. 1997 Mar;15(2):184-95.
16 The asymmetric synthesis and in vitro characterization of succinyl mercaptoalcohol and mercaptoketone inhibitors of matrix metalloproteinases. Bioorg Med Chem Lett. 1998 May 19;8(10):1163-8.
17 Design and synthesis of a series of (2R)-N(4)-hydroxy-2-(3-hydroxybenzyl)-N(1)- [(1S,2R)-2-hydroxy-2,3-dihydro-1H-inden-1-yl]butanediamide derivati... J Med Chem. 2001 Oct 11;44(21):3347-50.
18 The identification of beta-hydroxy carboxylic acids as selective MMP-12 inhibitors. Bioorg Med Chem Lett. 2009 Oct 1;19(19):5760-3.
19 Synthesis and SAR of alpha-sulfonylcarboxylic acids as potent matrix metalloproteinase inhibitors. Bioorg Med Chem Lett. 2006 Jun 15;16(12):3096-100.
20 Ranking the selectivity of PubChem screening hits by activity-based protein profiling: MMP13 as a case study. Bioorg Med Chem. 2009 Feb 1;17(3):1101-8.
21 Design, synthesis, biological evaluation, and NMR studies of a new series of arylsulfones as selective and potent matrix metalloproteinase-12 inhib... J Med Chem. 2009 Oct 22;52(20):6347-61.
22 How many drug targets are there Nat Rev Drug Discov. 2006 Dec;5(12):993-6.
23 Selective inhibition of matrix metalloproteinase isozymes and in vivo protection against emphysema by substituted gamma-keto carboxylic acids. J Med Chem. 2006 Jan 26;49(2):456-8.
24 Novel 5,5-disubstitutedpyrimidine-2,4,6-triones as selective MMP inhibitors. Bioorg Med Chem Lett. 2001 Apr 23;11(8):969-72.
25 Amber force field implementation, molecular modelling study, synthesis and MMP-1/MMP-2 inhibition profile of (R)- and (S)-N-hydroxy-2-(N-isopropoxy... Bioorg Med Chem. 2006 Jun 15;14(12):4260-76.
26 Carboxy derivatized glucosamine is a potent inhibitor of matrix metalloproteinase-9 in HT1080 cells. Bioorg Med Chem Lett. 2006 Jun 15;16(12):3105-10.
27 Methotrexate gamma-hydroxamate derivatives as potential dual target antitumor drugs. Bioorg Med Chem. 2007 Feb 1;15(3):1266-74.
28 Discovery of gamma-lactam hydroxamic acids as selective inhibitors of tumor necrosis factor alpha converting enzyme: design, synthesis, and structu... J Med Chem. 2002 Nov 7;45(23):4954-7.
29 Picking the S1, S1' and S2' pockets of matrix metalloproteinases. A niche for potent acyclic sulfonamide inhibitors. Bioorg Med Chem Lett. 1999 Jun 21;9(12):1691-6.
30 Novel bis-(arylsulfonamide) hydroxamate-based selective MMP inhibitors. Bioorg Med Chem Lett. 2008 Jun 1;18(11):3333-7.
31 Chromen-based TNF-alpha converting enzyme (TACE) inhibitors: design, synthesis, and biological evaluation. Bioorg Med Chem. 2008 Jan 1;16(1):530-5.
32 Azasugar-based MMP/ADAM inhibitors as antipsoriatic agents. J Med Chem. 2004 Apr 8;47(8):1930-8.
33 Matrix metalloproteinase inhibitors based on the 3-mercaptopyrrolidine core. J Med Chem. 2013 Jun 13;56(11):4357-73.
34 The new synthetic matrix metalloproteinase inhibitor (Roche 28-2653) reduces tumor growth and prolongs survival in a prostate cancer standard rat model. Oncogene. 2002 Mar 27;21(13):2089-96.
35 11,21-Bisphenyl-19-norpregnane derivatives are selective antiglucocorticoids, Bioorg. Med. Chem. Lett. 7(17):2299-2302 (1997).
36 Design, synthesis, and structure-activity relationships of macrocyclic hydroxamic acids that inhibit tumor necrosis factor alpha release in vitro and in vivo. J Med Chem. 2001 Aug 2;44(16):2636-60.
37 Synthesis and evaluation of succinoyl-caprolactam gamma-secretase inhibitors. Bioorg Med Chem Lett. 2006 May 1;16(9):2357-63.
38 A potent, selective inhibitor of matrix metalloproteinase-3 for the topical treatment of chronic dermal ulcers. J Med Chem. 2003 Jul 31;46(16):3514-25.
39 Matrix metalloproteinase-9 reduces islet amyloid formation by degrading islet amyloid polypeptide. J Biol Chem. 2013 Feb 1;288(5):3553-9.