General Information of Drug Therapeutic Target (DTT) (ID: TTN6J5F)

DTT Name Bacterial DNA gyrase (Bact gyrase)
Synonyms DNA gyrase
Gene Name Bact gyrA
DTT Type
Successful target
[1]
BioChemical Class
ATP-hydrolyzing DNA topoisomerase
UniProt ID
GYRA_STAAU ; GYRB_STAAU
TTD ID
T22348
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Sequence
MAELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRILYGLNEQGMTP
DKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAA
MRYTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPARFPNLLANGASGIAVGMA
TNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDFPTAGLILGKSGIRRAYETGRGS
IQMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRT
GVRVVIDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNGRPKLINLKEALVHYLEHQK
TVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRESDTDKVAMESLQQRFKLSEK
QAQAILDMRLRRLTGLERDKIEAEYNELLNYISELEAILADEEVLLQLVRDELTEIRDRF
GDDRRTEIQLGGFEDLEDEDLIPEEQIVITLSHNNYIKRLPVSTYRAQNRGGRGVQGMNT
LEEDFVSQLVTLSTHDHVLFFTNKGRVYKLKGYEVPELSRQSKGIPVVNAIELENDEVIS
TMIAVKDLESEDNFLVFATKRGVVKRSALSNFSRINRNGKIAISFREDDELIAVRLTSGQ
EDILIGTSHASLIRFPESTLRPLGRTATGVKGITLREGDEVVGLDVAHANSVDEVLVVTE
NGYGKRTPVNDYRLSNRGGKGIKTATITERNGNVVCITTVTGEEDLMIVTNAGVIIRLDV
ADISQNGRAAQGVRLIRLGDDQFVSTVAKVKEDAEDETNEDEQSTSTVSEDGTEQQREAV
VNDETPGNAIHTEVIDSEENDEDGRIEVRQDFMDRVEEDIQQSLDEDEE
Function
DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings.

Molecular Interaction Atlas (MIA) of This DTT

Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DTT
15 Approved Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
Besifloxacin DMPHXMI Ocular inflammation 9C61.24 Approved [1]
Ciprofloxacin XR DM2NLS9 Acute gonococcal cervicitis Approved [2]
Finafloxacin DMZEONG Urinary tract infection GC08 Approved [3]
Gatifloxacin DMSL679 Acute gonococcal cervicitis Approved [2]
Gemifloxacin DMHT34O Bacterial infection 1A00-1C4Z Approved [2]
Grepafloxacin DMGLX0T Chronic bronchitis CA20.1 Approved [4]
Levofloxacin DMS60RB Acute maxillary sinusitis Approved [2]
Moxifloxacin DMU8V4S Bacterial infection 1A00-1C4Z Approved [2]
Nemonoxacin DM0S9Z1 Community-acquired pneumonia CA40.Z Approved [5]
Norfloxacin DMIZ6W2 Acute gonococcal cervicitis Approved [2]
Ofloxacin DM0VQN3 Acute gonococcal cervicitis Approved [2]
Ozenoxacin DM6KZMG Impetigo 1B72 Approved [6]
Prulifloxacin DMOK965 Urinary tract infection GC08 Approved [7]
Sparfloxacin DMB4HCT Bacterial infection 1A00-1C4Z Approved [2]
Trovafloxacin DM6AN32 Acute gonococcal cervicitis Approved [2]
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⏷ Show the Full List of 15 Approved Drug(s)
9 Clinical Trial Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
AZD0914 DMM6G5D Neisseria gonorrhoeae infection 1A7Z Phase 3 [8]
BAY-35-3377 DMWYPZF Otitis media AA80-AB0Z Phase 3 [9]
Pazufloxacin DMHXTAQ Conjunctivitis 9A60 Phase 3 [10]
Zabofloxacin DMEY1F3 Pneumonia CA40 Phase 3 [11]
Sitafloxacin DMTV5XC Escherichia coli infection 1A03 Phase 2/3 [12]
JNJ-32729463 DMQD1GN Community-acquired pneumonia CA40.Z Phase 2 [13]
TNP-2092 DM8DZKI Skin and skin-structure infection 1F28-1G0Z Phase 2 [14]
VB 1953 DM0YWQ4 Acne vulgaris ED80 Phase 2 [15]
WCK-771 DMVQARP Bacterial infection 1A00-1C4Z Phase 2 [16]
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⏷ Show the Full List of 9 Clinical Trial Drug(s)
27 Discontinued Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
Temafloxacin DM3TON2 Bacterial infection 1A00-1C4Z Withdrawn from market [17]
OLAMUFLOXACIN MESILATE DM0O2HP Bacterial infection 1A00-1C4Z Discontinued in Phase 3 [18]
99mTc-ciprofloxacin DMSGY5M Infectious disease 1A00-CA43.1 Discontinued in Phase 2 [19]
A-86719.1 DM7VSBH Bacterial infection 1A00-1C4Z Discontinued in Phase 2 [20]
BAY-Y-3118 DMCZKG0 Bacterial infection 1A00-1C4Z Discontinued in Phase 2 [21]
Cadrofloxacin DMHJ3SN Bacterial infection 1A00-1C4Z Discontinued in Phase 2 [22]
CFC-222 DMHK8IM Bacterial infection 1A00-1C4Z Discontinued in Phase 2 [23]
DANOFLOXACIN DMF3E51 Bacterial infection 1A00-1C4Z Discontinued in Phase 2 [24]
DX-619 DMSTA5L Bacterial infection 1A00-1C4Z Discontinued in Phase 2 [25]
FANDOFLOXACIN HYDROCHLORIDE DM8UC0K Bacterial infection 1A00-1C4Z Discontinued in Phase 2 [18]
Ro-23-9424 DM4YA63 Bacterial infection 1A00-1C4Z Discontinued in Phase 2 [26]
AZD-5099 DMWKYV7 Infectious disease 1A00-CA43.1 Discontinued in Phase 1 [27]
Cetefloxacin DM85SYL Bacterial infection 1A00-1C4Z Discontinued in Phase 1 [18]
DV-7751A DMDC4BA Bacterial infection 1A00-1C4Z Discontinued in Phase 1 [28]
GSK945237 DM2AP64 Bacterial infection 1A00-1C4Z Discontinued in Phase 1 [29]
PD-131112 DMVFGWM Bacterial infection 1A00-1C4Z Discontinued in Phase 1 [18]
A-70826 DM9X24J Bacterial infection 1A00-1C4Z Terminated [31]
BMY-40062 DM2TF9P Bacterial infection 1A00-1C4Z Terminated [32]
CBR-2092 DMJAGKY Bacterial infection 1A00-1C4Z Terminated [33]
Clinafloxacin DM6F8L5 Pneumonia CA40 Terminated [34]
CP-67015 DMWFI4A Bacterial infection 1A00-1C4Z Terminated [2]
KB-5246 DM2LFYD Bacterial infection 1A00-1C4Z Terminated [35]
MF-5137 DM72MQP Staphylococcus infection 1B5Y Terminated [2]
PD-117596 DMN1A70 Bacterial infection 1A00-1C4Z Terminated [36]
Protosufloxacin DM57YO8 Bacterial infection 1A00-1C4Z Terminated [2]
Ro-23-7777 DM7B2WH Fungal infection 1F29-1F2F Terminated [2]
S-34109 DMPQIUH Staphylococcus infection 1B5Y Terminated [37]
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⏷ Show the Full List of 27 Discontinued Drug(s)
1 Preclinical Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
Viquidacin DMS5LPF Bacterial infection 1A00-1C4Z Preclinical [30]
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2 Investigative Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
NSFQ-105 DMSLA8X Discovery agent N.A. Investigative [38]
PD-117558 DM3KAY5 Discovery agent N.A. Investigative [39]
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References

1 Hughes B: 2009 FDA drug approvals. Nat Rev Drug Discov. 2010 Feb;9(2):89-92.
2 Drugs@FDA. U.S. Food and Drug Administration. U.S. Department of Health & Human Services.
3 2014 FDA drug approvals. Nat Rev Drug Discov. 2015 Feb;14(2):77-81.
4 Grepafloxacin, a dimethyl derivative of ciprofloxacin, acts preferentially through gyrase in Streptococcus pneumoniae: role of the C-5 group in tar... Antimicrob Agents Chemother. 2002 Feb;46(2):582-5.
5 Nemonoxacin: first global approval. Drugs. 2014 Aug;74(12):1445-53.
6 In vitro and in vivo antibacterial activity of T-3912, a novel non-fluorinated topical quinolone. J Antimicrob Chemother. 2002 Mar;49(3):455-65.
7 Prulifloxacin: a new antibacterial fluoroquinolone. Expert Rev Anti Infect Ther. 2006 Feb;4(1):27-41.
8 High in vitro activity of the novel spiropyrimidinetrione AZD0914, a DNA gyrase inhibitor, against multidrug-resistant Neisseria gonorrhoeae isolates suggests a new effective option for oral treatment of gonorrhea.Antimicrob Agents Chemother.2014 Sep;58(9):5585-8.
9 Antibiotics in the clinical pipeline in 2013. J Antibiot (Tokyo). 2013 Oct;66(10):571-91.
10 Target preference of 15 quinolones against Staphylococcus aureus, based on antibacterial activities and target inhibition. Antimicrob Agents Chemother. 2001 Dec;45(12):3544-7.
11 DNA gyrase and topoisomerase IV are dual targets of zabofloxacin in Streptococcus pneumoniae.Int J Antimicrob Agents.2010 Jul;36(1):97-8.
12 Dual-targeting properties of the 3-aminopyrrolidyl quinolones, DC-159a and sitafloxacin, against DNA gyrase and topoisomerase IV: contribution to reducing in vitro emergence of quinolone-resistant Streptococcus pneumoniae. J Antimicrob Chemother. 2008 Jul;62(1):98-104.
13 Antistaphylococcal activities of the new fluoroquinolone JNJ-Q2. Antimicrob Agents Chemother. 2011 Dec;55(12):5512-21.
14 Clinical pipeline report, company report or official report of TenNor Therapeutics.
15 Clinical pipeline report, company report or official report of Vyome Therapeutics.
16 Antistaphylococcal Activity of WCK 771, a Tricyclic Fluoroquinolone, in Animal Infection Models
17 Mechanisms and frequency of resistance to temafloxacin. Am J Med. 1991 Dec 30;91(6A):27S-30S.
18 Interpreting expression profiles of cancers by genome-wide survey of breadth of expression in normal tissues. Genomics 2005 Aug;86(2):127-41.
19 Binding of ciprofloxacin labelled with technetium Tc 99m versus 99mTc-pertechnetate to a live and killed equine isolate of Escherichia coli. Can J Vet Res. 2005 October; 69(4): 272-277.
20 Efficacy of ABT-719, a 2-pyridone antimicrobial, against enterococci, Escherichia coli, and Pseudomonas aeruginosa in experimental murine pyeloneph... J Antimicrob Chemother. 1996 Oct;38(4):641-53.
21 Bay Y 3118, a new quinolone derivative, rapidly eradicates Listeria monocytogenes from infected mice and L929 cells.
22 Hydrophilicity of quinolones is not an exclusive factor for decreased activity in efflux-mediated resistant mutants of Staphylococcus aureus. Antimicrob Agents Chemother. 1996 Aug;40(8):1835-42.
23 Fluoroquinolone resistance in Mycoplasma gallisepticum: DNA gyrase as primary target of enrofloxacin and impact of mutations in topoisomerases on r... J Antimicrob Chemother. 2002 Oct;50(4):589-92.
24 Pharmacokinetics and penetration of danofloxacin from the blood into the milk of cows. J Vet Pharmacol Ther. 1998 Jun;21(3):209-13.
25 DX-619, a novel des-fluoro(6) quinolone manifesting low frequency of selection of resistant Staphylococcus aureus mutants: quinolone resistance beyond modification of type II topoisomerases. Antimicrob Agents Chemother. 2005 Dec;49(12):5051-7.
26 Mode of action of the dual-action cephalosporin Ro 23-9424. Antimicrob Agents Chemother. 1989 Jul;33(7):1067-71.
27 Optimization of pyrrolamide topoisomerase II inhibitors toward identification of an antibacterial clinical candidate (AZD5099). J Med Chem. 2014 Jul 24;57(14):6060-82.
28 Antimicrobial activity of DV-7751a, a new fluoroquinolone.
29 Company report (gsk)
30 Selenophene-containing inhibitors of type IIA bacterial topoisomerases.J Med Chem.2011 May 12;54(9):3418-25.
31 Trusted, scientifically sound profiles of drug programs, clinical trials, safety reports, and company deals, written by scientists. Springer. 2015. Adis Insight (drug id 800001978)
32 Relationships among antibacterial activity, inhibition of DNA gyrase, and intracellular accumulation of 11 fluoroquinolones. Antimicrob Agents Chemother. 1992 Dec;36(12):2622-7.
33 In vitro evaluation of CBR-2092, a novel rifamycin-quinolone hybrid antibiotic: studies of the mode of action in Staphylococcus aureus.Antimicrob Agents Chemother.2008 Jul;52(7):2313-23.
34 DNA gyrase and topoisomerase IV are dual targets of clinafloxacin action in Streptococcus pneumoniae. Antimicrob Agents Chemother. 1998 Nov;42(11):2810-6.
35 Activity of KB-5246 against outer membrane mutants of Escherichia coli and Salmonella typhimurium.. Antimicrob Agents Chemother. 1990 July; 34(7): 1323-1325.
36 In vitro antibacterial activities of the fluoroquinolones PD 117596, PD 124816, and PD 127391. Diagn Microbiol Infect Dis. 1991 May-Jun;14(3):245-58.
37 Trusted, scientifically sound profiles of drug programs, clinical trials, safety reports, and company deals, written by scientists. Springer. 2015. Adis Insight (drug id 800007670)
38 Engineering the specificity of antibacterial fluoroquinolones: benzenesulfonamide modifications at C-7 of ciprofloxacin change its primary target i... Antimicrob Agents Chemother. 2000 Feb;44(2):320-5.
39 1-Substituted 7-[3-[(ethylamino)methyl]-1-pyrrolidinyl]-6,8- difluoro-1,4-dihydro-4-oxo-3-quinolinecarboxylic acids.New quantitative structure-activity relationships at N1 for the quinolone antibacterials.J Med Chem.1988 May;31(5):991-1001.