General Information of Drug Off-Target (DOT) (ID: OT5Q6SVK)

DOT Name NAD-dependent protein deacetylase sirtuin-2 (SIRT2)
Synonyms EC 2.3.1.286; NAD-dependent protein defatty-acylase sirtuin-2; EC 2.3.1.-; Regulatory protein SIR2 homolog 2; SIR2-like protein 2
Gene Name SIRT2
UniProt ID
SIR2_HUMAN
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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PDB ID
1J8F ; 3ZGO ; 3ZGV ; 4L3O ; 4R8M ; 4RMG ; 4RMH ; 4RMI ; 4RMJ ; 4X3O ; 4X3P ; 4Y6L ; 4Y6O ; 4Y6Q ; 5D7O ; 5D7P ; 5D7Q ; 5DY4 ; 5DY5 ; 5FYQ ; 5G4C ; 5MAR ; 5MAT ; 5Y0Z ; 5Y5N ; 5YQL ; 5YQM ; 5YQN ; 5YQO ; 6L65 ; 6L66 ; 6L71 ; 6L72 ; 6NR0 ; 6QCN ; 7BOS ; 7BOT ; 8OWZ
EC Number
2.3.1.-; 2.3.1.286
Pfam ID
PF02146
Sequence
MAEPDPSHPLETQAGKVQEAQDSDSDSEGGAAGGEADMDFLRNLFSQTLSLGSQKERLLD
ELTLEGVARYMQSERCRRVICLVGAGISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFE
ISYFKKHPEPFFALAKELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQ
EDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSLVKPDIVFFGESLP
ARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKAGQSDPFLGMI
MGLGGGMDFDSKKAYRDVAWLGECDQGCLALAELLGWKKELEDLVRREHASIDAQSGAGV
PNPSTSASPKKSPPPAKDEARTTEREKPQ
Function
NAD-dependent protein deacetylase, which deacetylates internal lysines on histone and alpha-tubulin as well as many other proteins such as key transcription factors. Participates in the modulation of multiple and diverse biological processes such as cell cycle control, genomic integrity, microtubule dynamics, cell differentiation, metabolic networks, and autophagy. Plays a major role in the control of cell cycle progression and genomic stability. Functions in the antephase checkpoint preventing precocious mitotic entry in response to microtubule stress agents, and hence allowing proper inheritance of chromosomes. Positively regulates the anaphase promoting complex/cyclosome (APC/C) ubiquitin ligase complex activity by deacetylating CDC20 and FZR1, then allowing progression through mitosis. Associates both with chromatin at transcriptional start sites (TSSs) and enhancers of active genes. Plays a role in cell cycle and chromatin compaction through epigenetic modulation of the regulation of histone H4 'Lys-20' methylation (H4K20me1) during early mitosis. Specifically deacetylates histone H4 at 'Lys-16' (H4K16ac) between the G2/M transition and metaphase enabling H4K20me1 deposition by KMT5A leading to ulterior levels of H4K20me2 and H4K20me3 deposition throughout cell cycle, and mitotic S-phase progression. Deacetylates KMT5A modulating KMT5A chromatin localization during the mitotic stress response. Deacetylates also histone H3 at 'Lys-57' (H3K56ac) during the mitotic G2/M transition. Upon bacterium Listeria monocytogenes infection, deacetylates 'Lys-18' of histone H3 in a receptor tyrosine kinase MET- and PI3K/Akt-dependent manner, thereby inhibiting transcriptional activity and promoting late stages of listeria infection. During oocyte meiosis progression, may deacetylate histone H4 at 'Lys-16' (H4K16ac) and alpha-tubulin, regulating spindle assembly and chromosome alignment by influencing microtubule dynamics and kinetochore function. Deacetylates histone H4 at 'Lys-16' (H4K16ac) at the VEGFA promoter and thereby contributes to regulate expression of VEGFA, a key regulator of angiogenesis. Deacetylates alpha-tubulin at 'Lys-40' and hence controls neuronal motility, oligodendroglial cell arbor projection processes and proliferation of non-neuronal cells. Phosphorylation at Ser-368 by a G1/S-specific cyclin E-CDK2 complex inactivates SIRT2-mediated alpha-tubulin deacetylation, negatively regulating cell adhesion, cell migration and neurite outgrowth during neuronal differentiation. Deacetylates PARD3 and participates in the regulation of Schwann cell peripheral myelination formation during early postnatal development and during postinjury remyelination. Involved in several cellular metabolic pathways. Plays a role in the regulation of blood glucose homeostasis by deacetylating and stabilizing phosphoenolpyruvate carboxykinase PCK1 activity in response to low nutrient availability. Acts as a key regulator in the pentose phosphate pathway (PPP) by deacetylating and activating the glucose-6-phosphate G6PD enzyme, and therefore, stimulates the production of cytosolic NADPH to counteract oxidative damage. Maintains energy homeostasis in response to nutrient deprivation as well as energy expenditure by inhibiting adipogenesis and promoting lipolysis. Attenuates adipocyte differentiation by deacetylating and promoting FOXO1 interaction to PPARG and subsequent repression of PPARG-dependent transcriptional activity. Plays a role in the regulation of lysosome-mediated degradation of protein aggregates by autophagy in neuronal cells. Deacetylates FOXO1 in response to oxidative stress or serum deprivation, thereby negatively regulating FOXO1-mediated autophagy. Deacetylates a broad range of transcription factors and co-regulators regulating target gene expression. Deacetylates transcriptional factor FOXO3 stimulating the ubiquitin ligase SCF(SKP2)-mediated FOXO3 ubiquitination and degradation. Deacetylates HIF1A and therefore promotes HIF1A degradation and inhibition of HIF1A transcriptional activity in tumor cells in response to hypoxia. Deacetylates RELA in the cytoplasm inhibiting NF-kappaB-dependent transcription activation upon TNF-alpha stimulation. Inhibits transcriptional activation by deacetylating p53/TP53 and EP300. Deacetylates also EIF5A. Functions as a negative regulator on oxidative stress-tolerance in response to anoxia-reoxygenation conditions. Plays a role as tumor suppressor. In addition to protein deacetylase activity, also has activity toward long-chain fatty acyl groups and mediates protein-lysine demyristoylation and depalmitoylation of target proteins, such as ARF6 and KRAS, thereby regulating their association with membranes ; [Isoform 1]: Deacetylates EP300, alpha-tubulin and histone H3 and H4; [Isoform 2]: Deacetylates EP300, alpha-tubulin and histone H3 and H4; [Isoform 5]: Lacks deacetylation activity, at least toward known SIRT2 targets.
Tissue Specificity
Isoform 1 is expressed in heart, liver and skeletal muscle, weakly expressed in the cortex. Isoform 2 is strongly expressed in the cortex, weakly expressed in heart and liver. Weakly expressed in several malignancies including breast, liver, brain, kidney and prostate cancers compared to normal tissues. Weakly expressed in glioma cell lines compared to normal brain tissues (at protein level). Widely expressed. Highly expressed in heart, brain and skeletal muscle, while it is weakly expressed in placenta and lung. Down-regulated in many gliomas suggesting that it may act as a tumor suppressor gene in human gliomas possibly through the regulation of microtubule network.
KEGG Pathway
Nicoti.te and nicoti.mide metabolism (hsa00760 )
Metabolic pathways (hsa01100 )
Reactome Pathway
Initiation of Nuclear Envelope (NE) Reformation (R-HSA-2995383 )
BioCyc Pathway
MetaCyc:ENSG00000068903-MONOMER

Molecular Interaction Atlas (MIA) of This DOT

Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
3 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate increases the methylation of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [1]
PMID28870136-Compound-52 DMFDERP Patented PMID28870136-Compound-52 increases the phosphorylation of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [15]
Coumarin DM0N8ZM Investigative Coumarin increases the phosphorylation of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [15]
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18 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Cisplatin DMRHGI9 Approved Cisplatin increases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [2]
Estradiol DMUNTE3 Approved Estradiol decreases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [3]
Methotrexate DM2TEOL Approved Methotrexate decreases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [4]
Phenobarbital DMXZOCG Approved Phenobarbital decreases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [5]
Cannabidiol DM0659E Approved Cannabidiol decreases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [6]
Ethanol DMDRQZU Approved Ethanol decreases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [7]
Paclitaxel DMLB81S Approved Paclitaxel decreases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [8]
Clozapine DMFC71L Approved Clozapine increases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [9]
Vitamin B3 DMQVRZH Approved Vitamin B3 increases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [10]
Nicotinamide DMUPE07 Approved Nicotinamide decreases the activity of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [11]
Urethane DM7NSI0 Phase 4 Urethane increases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [12]
Resveratrol DM3RWXL Phase 3 Resveratrol decreases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [13]
SEN-196 DMLDBQ5 Phase 2 SEN-196 decreases the activity of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [14]
CAMBINOL DMW46GY Patented CAMBINOL decreases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [16]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [3]
Formaldehyde DM7Q6M0 Investigative Formaldehyde increases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [17]
Manganese DMKT129 Investigative Manganese increases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [18]
NORCANTHARIDIN DM9B6Y1 Investigative NORCANTHARIDIN decreases the expression of NAD-dependent protein deacetylase sirtuin-2 (SIRT2). [8]
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⏷ Show the Full List of 18 Drug(s)

References

1 Integrative omics data analyses of repeated dose toxicity of valproic acid in vitro reveal new mechanisms of steatosis induction. Toxicology. 2018 Jan 15;393:160-170.
2 Activation of AIFM2 enhances apoptosis of human lung cancer cells undergoing toxicological stress. Toxicol Lett. 2016 Sep 6;258:227-236.
3 Genome-Wide Analysis of Low Dose Bisphenol-A (BPA) Exposure in Human Prostate Cells. Curr Genomics. 2019 May;20(4):260-274. doi: 10.2174/1389202920666190603123040.
4 The contribution of methotrexate exposure and host factors on transcriptional variance in human liver. Toxicol Sci. 2007 Jun;97(2):582-94.
5 Proteomic analysis of hepatic effects of phenobarbital in mice with humanized liver. Arch Toxicol. 2022 Oct;96(10):2739-2754. doi: 10.1007/s00204-022-03338-7. Epub 2022 Jul 26.
6 Role of miRNA in the regulation of cannabidiol-mediated apoptosis in neuroblastoma cells. Oncotarget. 2019 Jan 1;10(1):45-59. doi: 10.18632/oncotarget.26534. eCollection 2019 Jan 1.
7 Pterostilbene attenuates RIPK3-dependent hepatocyte necroptosis in alcoholic liver disease via SIRT2-mediated NFATc4 deacetylation. Toxicology. 2021 Sep;461:152923. doi: 10.1016/j.tox.2021.152923. Epub 2021 Aug 30.
8 Norcantharidin combined with paclitaxel induces endoplasmic reticulum stress mediated apoptotic effect in prostate cancer cells by targeting SIRT7 expression. Environ Toxicol. 2021 Nov;36(11):2206-2216. doi: 10.1002/tox.23334. Epub 2021 Jul 16.
9 Toxicoproteomics reveals an effect of clozapine on autophagy in human liver spheroids. Toxicol Mech Methods. 2023 Jun;33(5):401-410. doi: 10.1080/15376516.2022.2156005. Epub 2022 Dec 19.
10 Effects of niacin restriction on sirtuin and PARP responses to photodamage in human skin. PLoS One. 2012;7(7):e42276. doi: 10.1371/journal.pone.0042276. Epub 2012 Jul 31.
11 Effects of histone deacetylase inhibitors, sodium phenyl butyrate and vitamin B3, in combination with retinoic acid on granulocytic differentiation of human promyelocytic leukemia HL-60 cells. Ann N Y Acad Sci. 2006 Dec;1091:356-67. doi: 10.1196/annals.1378.080.
12 Ethyl carbamate induces cell death through its effects on multiple metabolic pathways. Chem Biol Interact. 2017 Nov 1;277:21-32.
13 Resveratrol inhibits growth of orthotopic pancreatic tumors through activation of FOXO transcription factors. PLoS One. 2011;6(9):e25166. doi: 10.1371/journal.pone.0025166. Epub 2011 Sep 27.
14 Non-specific SIRT inhibition as a mechanism for the cytotoxicity of ginkgolic acids and urushiols. Toxicol Lett. 2014 Sep 2;229(2):374-80. doi: 10.1016/j.toxlet.2014.07.002. Epub 2014 Jul 3.
15 Quantitative phosphoproteomics reveal cellular responses from caffeine, coumarin and quercetin in treated HepG2 cells. Toxicol Appl Pharmacol. 2022 Aug 15;449:116110. doi: 10.1016/j.taap.2022.116110. Epub 2022 Jun 7.
16 Inhibition of sirtuins 1 and 2 impairs cell survival and migration and modulates the expression of P-glycoprotein and MRP3 in hepatocellular carcinoma cell lines. Toxicol Lett. 2018 Jun 1;289:63-74. doi: 10.1016/j.toxlet.2018.03.011. Epub 2018 Mar 12.
17 Characterization of formaldehyde's genotoxic mode of action by gene expression analysis in TK6 cells. Arch Toxicol. 2013 Nov;87(11):1999-2012.
18 Gene expression profiling of human primary astrocytes exposed to manganese chloride indicates selective effects on several functions of the cells. Neurotoxicology. 2007 May;28(3):478-89.