General Information of Drug Therapeutic Target (DTT) (ID: TT9SL3Q)

DTT Name Polypeptide deformylase (PDF)
Synonyms PDF
Gene Name PDF
DTT Type
Successful target
[1]
BioChemical Class
CH-NH donor oxidoreductase
UniProt ID
DEFM_HUMAN
TTD ID
T89515
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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EC Number
EC 3.5.1.88
Sequence
MARLWGALSLWPLWAAVPWGGAAAVGVRACSSTAAPDGVEGPALRRSYWRHLRRLVLGPP
EPPFSHVCQVGDPVLRGVAAPVERAQLGGPELQRLTQRLVQVMRRRRCVGLSAPQLGVPR
QVLALELPEALCRECPPRQRALRQMEPFPLRVFVNPSLRVLDSRLVTFPEGCESVAGFLA
CVPRFQAVQISGLDPNGEQVVWQASGWAARIIQHEMDHLQGCLFIDKMDSRTFTNVYWMK
VND
Function
Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, DNA precursor synthesis, and for the conversion of dUMP to dTMP.
Reactome Pathway
Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation (R-HSA-1474151 )
Metabolism of folate and pterines (R-HSA-196757 )
G1/S-Specific Transcription (R-HSA-69205 )
E2F mediated regulation of DNA replication (R-HSA-113510 )

Molecular Interaction Atlas (MIA) of This DTT

Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DTT
7 Approved Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
Chlorproguanil DM1IFGT Malaria 1F40-1F45 Approved [1]
MCB-3837 DM0R4Z5 Malaria 1F40-1F45 Approved [1]
Meprobamate DMHM93Y Anxiety Approved [1]
Pralatrexate DMAO80I Breast cancer 2C60-2C65 Approved [2]
Proguanil DMBL79I Malaria 1F40-1F45 Approved [3]
Trimetrexate DMDEA85 Toxoplasmosis 1F57 Approved [4]
Ustekinumab DMHTYK3 Plaque psoriasis EA90.0 Approved [5]
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⏷ Show the Full List of 7 Approved Drug(s)
2 Clinical Trial Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
LY333531 DMGMC8H Solid tumour/cancer 2A00-2F9Z Phase 2 [6]
Metoprine DM5GQD7 Advanced cancer 2A00-2F9Z Phase 2 [7]
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1 Discontinued Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
Aminopterin DMQ9RBV leukaemia 2A60-2B33 Withdrawn from market [8]
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56 Investigative Drug(s) Targeting This DTT
Drug Name Drug ID Indication ICD 11 Highest Status REF
2'-Monophosphoadenosine 5'-Diphosphoribose DME9S8M Discovery agent N.A. Investigative [9]
2'-Monophosphoadenosine-5'-Diphosphate DMDYRNF Discovery agent N.A. Investigative [9]
2-(N-Morpholino)-Ethanesulfonic Acid DMZVHSB Discovery agent N.A. Investigative [9]
2-Allylthio-3-benzyl-6-nitro-quinazolin-4(3H)-one DMTO1EJ Discovery agent N.A. Investigative [10]
2-Allylthio-6-amino-3-benzyl-quinazolin-4(3H)-one DMBWGCX Discovery agent N.A. Investigative [10]
2-Sulfhydryl-Ethanol DMJBO3D Discovery agent N.A. Investigative [9]
3-Benzyl-2-ethylthio-6-nitro-quinazolin-4(3H)-one DMQ13Z8 Discovery agent N.A. Investigative [10]
3-benzyl-2-mercapto-6-nitroquinazolin-4(3H)-one DM4GWAH Discovery agent N.A. Investigative [10]
3-Phenylsulfanylmethyl-quinoxaline-5,7-diamine DMRNHXE Discovery agent N.A. Investigative [11]
4-(2,6-diamino-9H-purin-8-yl)-2,6-dimethoxyphenol DMH3TBQ Discovery agent N.A. Investigative [12]
5-((E)-Styryl)-quinazoline-2,4-diamine DMH0QA7 Discovery agent N.A. Investigative [13]
5-(2-fluorobenzyloxy)quinazoline-2,4-diamine DMQCYEK Discovery agent N.A. Investigative [14]
5-(4-Methoxyphenoxy)-2,4-Quinazolinediamine DM3SQEY Discovery agent N.A. Investigative [9]
5-Chloryl-2,4,6-Quinazolinetriamine DMWS3D6 Discovery agent N.A. Investigative [9]
5-Formyl-6-Hydrofolic Acid DM371WE Discovery agent N.A. Investigative [9]
5-p-Tolylsulfanyl-quinazoline-2,4-diamine DMV4ICS Discovery agent N.A. Investigative [15]
5-Phenethyl-quinazoline-2,4-diamine DMWI7XJ Discovery agent N.A. Investigative [13]
5-Phenylsulfanyl-2,4-Quinazolinediamine DMMWYFR Discovery agent N.A. Investigative [9]
6,7-Diphenyl-pteridine-2,4-diamine DM7U8ID Discovery agent N.A. Investigative [16]
6-(2-Phenylsulfanyl-ethyl)-pteridine-2,4-diamine DMKXNP0 Discovery agent N.A. Investigative [16]
6-m-Tolyl-pteridine-2,4,7-triamine DMHU78R Discovery agent N.A. Investigative [16]
6-Phenylaminomethyl-quinazoline-2,4-diamine DMG6PZT Discovery agent N.A. Investigative [17]
6-Phenylsulfanylmethyl-pteridine-2,4-diamine DM6GWRB Discovery agent N.A. Investigative [18]
7-Methyl-7H-pyrrolo[3,2-f]quinazoline-1,3-diamine DMZKO14 Discovery agent N.A. Investigative [19]
7H-Pyrrolo[3,2-f]quinazoline-1,3-diamine DMEGSZD Discovery agent N.A. Investigative [19]
8-(2,3,4-trimethoxyphenyl)-9H-purine-2,6-diamine DM3QV95 Discovery agent N.A. Investigative [12]
8-(2,4,5-trimethoxyphenyl)-9H-purine-2,6-diamine DM4KP5M Discovery agent N.A. Investigative [12]
8-(2,4,6-trimethoxyphenyl)-9H-purine-2,6-diamine DM5TSJF Discovery agent N.A. Investigative [12]
8-(2,4-dimethoxyphenyl)-9H-purine-2,6-diamine DMJPYIZ Discovery agent N.A. Investigative [12]
8-(2,5-dimethoxyphenyl)-9H-purine-2,6-diamine DM0MIGU Discovery agent N.A. Investigative [12]
8-(2,6-Dichloro-phenyl)-9H-purine-2,6-diamine DMECWL1 Discovery agent N.A. Investigative [20]
8-(3,4,5-trimethoxyphenyl)-9H-purine-2,6-diamine DMV63G1 Discovery agent N.A. Investigative [12]
8-(3,4-dichlorophenyl)-9H-purine-2,6-diamine DMZU0YF Discovery agent N.A. Investigative [12]
8-(3,4-dimethoxyphenyl)-9H-purine-2,6-diamine DMYZC3I Discovery agent N.A. Investigative [12]
8-(3,5-dimethoxyphenyl)-9H-purine-2,6-diamine DM920XR Discovery agent N.A. Investigative [12]
8-benzyl-9H-purine-2,6-diamine DM32OQB Discovery agent N.A. Investigative [12]
8-Pyridin-4-yl-9H-purine-2,6-diamine DM1I25F Discovery agent N.A. Investigative [20]
Biopterin DMLNQ2F Discovery agent N.A. Investigative [9]
Brodimoprim-4,6-Dicarboxylate DM7OF6N Discovery agent N.A. Investigative [9]
Bromo-WR99210 DMKFTW8 Discovery agent N.A. Investigative [9]
Cycloguanil DMC520D Malaria 1F40-1F45 Investigative [21]
DDATHF DM6GWAC Discovery agent N.A. Investigative [9]
Dihydrofolic Acid DM1BDM8 Discovery agent N.A. Investigative [9]
Edatrexate DM32O0L Discovery agent N.A. Investigative [8]
Furo[2,3d]Pyrimidine Antifolate DMVYEZ1 Discovery agent N.A. Investigative [9]
GNF-PF-173 DMUSAYG Discovery agent N.A. Investigative [22]
GNF-PF-607 DMJXE6K Discovery agent N.A. Investigative [23]
N*6*-Benzyl-quinazoline-2,4,6-triamine DMRNGV0 Discovery agent N.A. Investigative [23]
NB3178 DMNM6GQ Gram-positive bacterial infection 1B74-1G40 Investigative [24]
NB3322 DMJHWGS Gram-positive bacterial infection 1B74-1G40 Investigative [24]
Pergularinine DM8OC9F Discovery agent N.A. Investigative [25]
PREMETREXED DMVOGT4 Discovery agent N.A. Investigative [26]
Ro 5-4864 DMTQP0K Gram-positive bacterial infection 1B74-1G40 Investigative [24]
Sri-9439 DM5GILS Discovery agent N.A. Investigative [27]
Sri-9662 DMYO4A3 Discovery agent N.A. Investigative [9]
Tylophorinidine DMHFCZA Discovery agent N.A. Investigative [25]
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⏷ Show the Full List of 56 Investigative Drug(s)

Molecular Expression Atlas (MEA) of This DTT

Molecular Expression Atlas (MEA) Jump to Detail Molecular Expression Atlas of This DTT
Disease Name ICD 11 Studied Tissue p-value Fold-Change Z-score
Acute myelocytic leukaemia 2C82 Bone marrow 8.87E-16 -0.54 -0.86
Rheumatoid arthritis FA20 Synovial tissue 1.08E-02 0.38 1.46
Bladder cancer 2C82 Bladder tissue 5.11E-06 0.97 3.88
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References

1 The fight against drug-resistant malaria: novel plasmodial targets and antimalarial drugs. Curr Med Chem. 2008;15(2):161-71.
2 Hughes B: 2009 FDA drug approvals. Nat Rev Drug Discov. 2010 Feb;9(2):89-92.
3 Transformation with human dihydrofolate reductase renders malaria parasites insensitive to WR99210 but does not affect the intrinsic activity of proguanil. Proc Natl Acad Sci U S A. 1997 Sep 30;94(20):10931-6.
4 Expression and characterization of recombinant human-derived Pneumocystis carinii dihydrofolate reductase. Antimicrob Agents Chemother. 2000 Nov;44(11):3092-6.
5 Novel Saccharomyces cerevisiae screen identifies WR99210 analogues that inhibit Mycobacterium tuberculosis dihydrofolate reductase. Antimicrob Agents Chemother. 2002 Nov;46(11):3362-9.
6 Three-dimensional structure of M. tuberculosis dihydrofolate reductase reveals opportunities for the design of novel tuberculosis drugs. J Mol Biol. 2000 Jan 14;295(2):307-23.
7 Mutant Gly482 and Thr482 ABCG2 mediate high-level resistance to lipophilic antifolates. Cancer Chemother Pharmacol. 2006 Dec;58(6):826-34.
8 Loss of folylpoly-gamma-glutamate synthetase activity is a dominant mechanism of resistance to polyglutamylation-dependent novel antifolates in multiple human leukemia sublines. Int J Cancer. 2003 Feb 20;103(5):587-99.
9 How many drug targets are there Nat Rev Drug Discov. 2006 Dec;5(12):993-6.
10 Non-classical antifolates. Part 2: synthesis, biological evaluation, and molecular modeling study of some new 2,6-substituted-quinazolin-4-ones. Bioorg Med Chem. 2010 Apr 15;18(8):2849-63.
11 New drug developments for opportunistic infections in immunosuppressed patients: Pneumocystis carinii. J Med Chem. 1995 Nov 24;38(24):4739-59.
12 CoMFA analysis of tgDHFR and rlDHFR based on antifolates with 6-5 fused ring system using the all-orientation search (AOS) routine and a modified c... Bioorg Med Chem. 2010 Feb 15;18(4):1684-701.
13 2,4-Diamino-5-substituted-quinazolines as inhibitors of a human dihydrofolate reductase with a site-directed mutation at position 22 and of the dih... J Med Chem. 1995 Mar 3;38(5):745-52.
14 Synthesis and biological evaluation of novel 2,4-diaminoquinazoline derivatives as SMN2 promoter activators for the potential treatment of spinal m... J Med Chem. 2008 Feb 14;51(3):449-69.
15 X-Ray crystal structures of Candida albicans dihydrofolate reductase: high resolution ternary complexes in which the dihydronicotinamide moiety of ... J Med Chem. 2001 Aug 30;44(18):2928-32.
16 Further studies on 2,4-diamino-5-(2',5'-disubstituted benzyl)pyrimidines as potent and selective inhibitors of dihydrofolate reductases from three ... J Med Chem. 2003 Apr 24;46(9):1726-36.
17 Design and synthesis of dihydrofolate reductase inhibitors encompassing a bridging ester group. Evaluation in a mouse colitis model. J Med Chem. 2003 Jul 31;46(16):3455-62.
18 Nonclassical 2,4-diamino-8-deazafolate analogues as inhibitors of dihydrofolate reductases from rat liver, Pneumocystis carinii, and Toxoplasma gon... J Med Chem. 1996 Apr 26;39(9):1836-45.
19 High-affinity inhibitors of dihydrofolate reductase: antimicrobial and anticancer activities of 7,8-dialkyl-1,3-diaminopyrrolo[3,2-f]quinazolines w... J Med Chem. 1996 Feb 16;39(4):892-903.
20 Conformationally restricted analogues of trimethoprim: 2,6-diamino-8-substituted purines as potential dihydrofolate reductase inhibitors from Pneum... J Med Chem. 1997 Sep 12;40(19):3032-9.
21 Opportunities and challenges in antiparasitic drug discovery. Nat Rev Drug Discov. 2005 Sep;4(9):727-40.
22 Synthesis and biological evaluation of poly-gamma-glutamyl metabolites of 10-deazaaminopterin and 10-ethyl-10-deazaaminopterin. J Med Chem. 1988 Jan;31(1):181-5.
23 CoMFA and CoMSIA analyses of Pneumocystis carinii dihydrofolate reductase, Toxoplasma gondii dihydrofolate reductase, and rat liver dihydrofolate r... J Med Chem. 2005 Mar 10;48(5):1448-69.
24 Emerging drugs for bacterial urinary tract infections. Expert Opin Emerg Drugs. 2005 May;10(2):275-98.
25 Inhibition of dihydrofolate reductase and cell growth activity by the phenanthroindolizidine alkaloids pergularinine and tylophorinidine: the in vitro cytotoxicity of these plant alkaloids and their potential as antimicrobial and anticancer agents. Toxicol In Vitro. 2000 Feb;14(1):53-9.
26 Synthesis, antifolate, and antitumor activities of classical and nonclassical 2-amino-4-oxo-5-substituted-pyrrolo[2,3-d]pyrimidines. J Med Chem. 2001 Jun 7;44(12):1993-2003.
27 DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Nucleic Acids Res. 2011 Jan;39(Database issue):D1035-41.