General Information of Drug Off-Target (DOT) (ID: OTB0TKAG)

DOT Name Beta-galactosidase (GLB1)
Synonyms EC 3.2.1.23; Acid beta-galactosidase; Lactase; Elastin receptor 1
Gene Name GLB1
Related Disease
GM1 gangliosidosis ( )
GM1 gangliosidosis type 3 ( )
Mucopolysaccharidosis type 4B ( )
GM1 gangliosidosis type 1 ( )
GM1 gangliosidosis type 2 ( )
UniProt ID
BGAL_HUMAN
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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PDB ID
3THC; 3THD; 3WEZ; 3WF0; 3WF1; 3WF2; 3WF3; 3WF4
EC Number
3.2.1.23
Pfam ID
PF21317 ; PF21467 ; PF01301
Sequence
MPGFLVRILPLLLVLLLLGPTRGLRNATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRV
PRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVIL
RPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPV
ITVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFTTDGAHKTFLKCGALQGLYTTV
DFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARG
ASVNLYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKV
PEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRT
TLPQDCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENM
GRVNYGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWA
HNSSNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLT
LFVPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKR
LMPPPPQKNKDSWLDHV
Function
[Isoform 1]: Cleaves beta-linked terminal galactosyl residues from gangliosides, glycoproteins, and glycosaminoglycans; [Isoform 2]: Has no beta-galactosidase catalytic activity, but plays functional roles in the formation of extracellular elastic fibers (elastogenesis) and in the development of connective tissue. Seems to be identical to the elastin-binding protein (EBP), a major component of the non-integrin cell surface receptor expressed on fibroblasts, smooth muscle cells, chondroblasts, leukocytes, and certain cancer cell types. In elastin producing cells, associates with tropoelastin intracellularly and functions as a recycling molecular chaperone which facilitates the secretions of tropoelastin and its assembly into elastic fibers.
Tissue Specificity Detected in placenta (at protein level) . Detected in fibroblasts and testis .
KEGG Pathway
Galactose metabolism (hsa00052 )
Other glycan degradation (hsa00511 )
Glycosaminoglycan degradation (hsa00531 )
Sphingolipid metabolism (hsa00600 )
Glycosphingolipid biosynthesis - ganglio series (hsa00604 )
Metabolic pathways (hsa01100 )
Lysosome (hsa04142 )
Reactome Pathway
HS-GAG degradation (R-HSA-2024096 )
MPS IV - Morquio syndrome B (R-HSA-2206308 )
Sialic acid metabolism (R-HSA-4085001 )
Defective NEU1 causes sialidosis (R-HSA-4341670 )
Neutrophil degranulation (R-HSA-6798695 )
Glycosphingolipid catabolism (R-HSA-9840310 )
Keratan sulfate degradation (R-HSA-2022857 )

Molecular Interaction Atlas (MIA) of This DOT

5 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
GM1 gangliosidosis DISN3L2M Definitive Autosomal recessive [1]
GM1 gangliosidosis type 3 DISS3EX6 Definitive Autosomal recessive [2]
Mucopolysaccharidosis type 4B DISPCAUH Definitive Autosomal recessive [1]
GM1 gangliosidosis type 1 DISE7GM9 Strong Autosomal recessive [3]
GM1 gangliosidosis type 2 DISYMW73 Strong Autosomal recessive [3]
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Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
27 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate increases the expression of Beta-galactosidase (GLB1). [4]
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of Beta-galactosidase (GLB1). [5]
Tretinoin DM49DUI Approved Tretinoin increases the expression of Beta-galactosidase (GLB1). [6]
Doxorubicin DMVP5YE Approved Doxorubicin decreases the expression of Beta-galactosidase (GLB1). [7]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of Beta-galactosidase (GLB1). [8]
Cisplatin DMRHGI9 Approved Cisplatin increases the expression of Beta-galactosidase (GLB1). [9]
Estradiol DMUNTE3 Approved Estradiol decreases the expression of Beta-galactosidase (GLB1). [10]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of Beta-galactosidase (GLB1). [11]
Arsenic trioxide DM61TA4 Approved Arsenic trioxide increases the activity of Beta-galactosidase (GLB1). [12]
Hydrogen peroxide DM1NG5W Approved Hydrogen peroxide increases the expression of Beta-galactosidase (GLB1). [13]
Methotrexate DM2TEOL Approved Methotrexate increases the expression of Beta-galactosidase (GLB1). [14]
Phenobarbital DMXZOCG Approved Phenobarbital affects the expression of Beta-galactosidase (GLB1). [15]
Cannabidiol DM0659E Approved Cannabidiol increases the activity of Beta-galactosidase (GLB1). [16]
Mitomycin DMH0ZJE Approved Mitomycin increases the activity of Beta-galactosidase (GLB1). [17]
Melphalan DMOLNHF Approved Melphalan increases the expression of Beta-galactosidase (GLB1). [9]
Ritonavir DMU764S Approved Ritonavir increases the activity of Beta-galactosidase (GLB1). [18]
Nitric Oxide DM1RBYG Approved Nitric Oxide decreases the activity of Beta-galactosidase (GLB1). [10]
Bendamustine hydrochloride DMFH15Z Approved Bendamustine hydrochloride increases the expression of Beta-galactosidase (GLB1). [9]
BMS-777607 DMGM7QD Phase 1/2 BMS-777607 increases the activity of Beta-galactosidase (GLB1). [19]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene increases the expression of Beta-galactosidase (GLB1). [20]
Bisphenol A DM2ZLD7 Investigative Bisphenol A increases the expression of Beta-galactosidase (GLB1). [21]
D-glucose DMMG2TO Investigative D-glucose increases the activity of Beta-galactosidase (GLB1). [22]
Lithium chloride DMHYLQ2 Investigative Lithium chloride increases the activity of Beta-galactosidase (GLB1). [17]
Microcystin-LR DMTMLRN Investigative Microcystin-LR decreases the activity of Beta-galactosidase (GLB1). [23]
PP-242 DM2348V Investigative PP-242 increases the expression of Beta-galactosidase (GLB1). [24]
Wogonin DMGCF51 Investigative Wogonin increases the expression of Beta-galactosidase (GLB1). [25]
DMQNVR8 increases the activity of Beta-galactosidase (GLB1). [18]
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⏷ Show the Full List of 27 Drug(s)

References

1 Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020 Feb;22(2):245-257. doi: 10.1038/s41436-019-0686-8. Epub 2019 Nov 6.
2 GM1-gangliosidosis: tandem duplication within exon 3 of beta-galactosidase gene in an infantile patient. Clin Genet. 1992 May;41(5):235-8. doi: 10.1111/j.1399-0004.1992.tb03672.x.
3 The Gene Curation Coalition: A global effort to harmonize gene-disease evidence resources. Genet Med. 2022 Aug;24(8):1732-1742. doi: 10.1016/j.gim.2022.04.017. Epub 2022 May 4.
4 Human embryonic stem cell-derived test systems for developmental neurotoxicity: a transcriptomics approach. Arch Toxicol. 2013 Jan;87(1):123-43.
5 Integrating multiple omics to unravel mechanisms of Cyclosporin A induced hepatotoxicity in vitro. Toxicol In Vitro. 2015 Apr;29(3):489-501.
6 Phenotypic characterization of retinoic acid differentiated SH-SY5Y cells by transcriptional profiling. PLoS One. 2013 May 28;8(5):e63862.
7 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
8 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
9 Chronic senescent human mesenchymal stem cells as possible contributor to the wound healing disorder after exposure to the alkylating agent sulfur mustard. Arch Toxicol. 2021 Feb;95(2):727-747. doi: 10.1007/s00204-020-02946-5. Epub 2021 Jan 25.
10 Endothelial cellular senescence is inhibited by nitric oxide: implications in atherosclerosis associated with menopause and diabetes. Proc Natl Acad Sci U S A. 2006 Nov 7;103(45):17018-23. doi: 10.1073/pnas.0607873103. Epub 2006 Oct 30.
11 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
12 Arsenic induces human chondrocyte senescence and accelerates rat articular cartilage aging. Arch Toxicol. 2020 Jan;94(1):89-101. doi: 10.1007/s00204-019-02607-2. Epub 2019 Nov 16.
13 PARP1 inhibitor (PJ34) improves the function of aging-induced endothelial progenitor cells by preserving intracellular NAD(+) levels and increasing SIRT1 activity. Stem Cell Res Ther. 2018 Aug 23;9(1):224. doi: 10.1186/s13287-018-0961-7.
14 Functional gene expression profile underlying methotrexate-induced senescence in human colon cancer cells. Tumour Biol. 2011 Oct;32(5):965-76.
15 Reproducible chemical-induced changes in gene expression profiles in human hepatoma HepaRG cells under various experimental conditions. Toxicol In Vitro. 2009 Apr;23(3):466-75. doi: 10.1016/j.tiv.2008.12.018. Epub 2008 Dec 30.
16 Cannabidiol-induced transcriptomic changes and cellular senescence in human Sertoli cells. Toxicol Sci. 2023 Feb 17;191(2):227-238. doi: 10.1093/toxsci/kfac131.
17 Mitomycin induces alveolar epithelial cell senescence by down-regulating GSK3 signaling. Toxicol Lett. 2021 Nov 1;352:61-69. doi: 10.1016/j.toxlet.2021.09.015. Epub 2021 Oct 5.
18 Premature senescence of vascular cells is induced by HIV protease inhibitors: implication of prelamin A and reversion by statin. Arterioscler Thromb Vasc Biol. 2010 Dec;30(12):2611-20. doi: 10.1161/ATVBAHA.110.213603. Epub 2010 Sep 30.
19 Prevention of BMS-777607-induced polyploidy/senescence by mTOR inhibitor AZD8055 sensitizes breast cancer cells to cytotoxic chemotherapeutics. Mol Oncol. 2014 May;8(3):469-82. doi: 10.1016/j.molonc.2013.12.014. Epub 2014 Jan 2.
20 Benzo[ghi]perylene induces cellular dormancy signaling and endoplasmic reticulum stress in NL-20 human bronchial epithelial cells. Toxicol Appl Pharmacol. 2022 Mar 15;439:115925. doi: 10.1016/j.taap.2022.115925. Epub 2022 Feb 16.
21 Bisphenol A induces DSB-ATM-p53 signaling leading to cell cycle arrest, senescence, autophagy, stress response, and estrogen release in human fetal lung fibroblasts. Arch Toxicol. 2018 Apr;92(4):1453-1469.
22 Fluorometholone inhibits high glucose-induced cellular senescence in human retinal endothelial cells. Hum Exp Toxicol. 2022 Jan-Dec;41:9603271221076107. doi: 10.1177/09603271221076107.
23 MC-LR-induced interaction between M2 macrophage and biliary epithelial cell promotes biliary epithelial cell proliferation and migration through regulating STAT3. Cell Biol Toxicol. 2021 Dec;37(6):935-949. doi: 10.1007/s10565-020-09575-9. Epub 2021 Jan 21.
24 Marine biogenics in sea spray aerosols interact with the mTOR signaling pathway. Sci Rep. 2019 Jan 24;9(1):675.
25 Wogonin induces cellular senescence in breast cancer via suppressing TXNRD2 expression. Arch Toxicol. 2020 Oct;94(10):3433-3447. doi: 10.1007/s00204-020-02842-y. Epub 2020 Jul 15.