General Information of Drug Off-Target (DOT) (ID: OTM3B3OA)

DOT Name F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1)
Synonyms Nuclear receptor corepressor/HDAC3 complex subunit TBLR1; TBL1-related protein 1; Transducin beta-like 1X-related protein 1
Gene Name TBL1XR1
Related Disease
Complex neurodevelopmental disorder ( )
Pierpont syndrome ( )
Intellectual disability, autosomal dominant 41 ( )
UniProt ID
TBL1R_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
PDB ID
4LG9
Pfam ID
PF08513 ; PF00400
Sequence
MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
Function
F-box-like protein involved in the recruitment of the ubiquitin/19S proteasome complex to nuclear receptor-regulated transcription units. Plays an essential role in transcription activation mediated by nuclear receptors. Probably acts as integral component of the N-Cor corepressor complex that mediates the recruitment of the 19S proteasome complex, leading to the subsequent proteasomal degradation of N-Cor complex, thereby allowing cofactor exchange, and transcription activation.
Tissue Specificity Widely expressed including the pituitary, hypothalamus, white and brown adipose tissue, muscle and liver.
KEGG Pathway
Wnt sig.ling pathway (hsa04310 )
Reactome Pathway
BMAL1 (R-HSA-1368108 )
PPARA activates gene expression (R-HSA-1989781 )
NOTCH1 Intracellular Domain Regulates Transcription (R-HSA-2122947 )
Transcriptional activation of mitochondrial biogenesis (R-HSA-2151201 )
Activation of gene expression by SREBF (SREBP) (R-HSA-2426168 )
Constitutive Signaling by NOTCH1 PEST Domain Mutants (R-HSA-2644606 )
Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants (R-HSA-2894862 )
HDACs deacetylate histones (R-HSA-3214815 )
Notch-HLH transcription pathway (R-HSA-350054 )
Transcriptional regulation of white adipocyte differentiation (R-HSA-381340 )
Regulation of lipid metabolism by PPARalpha (R-HSA-400206 )
Circadian Clock (R-HSA-400253 )
Loss of MECP2 binding ability to the NCoR/SMRT complex (R-HSA-9022537 )
Regulation of MECP2 expression and activity (R-HSA-9022692 )
NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux (R-HSA-9029569 )
HCMV Early Events (R-HSA-9609690 )
Cytoprotection by HMOX1 (R-HSA-9707564 )
Heme signaling (R-HSA-9707616 )
RORA activates gene expression (R-HSA-1368082 )

Molecular Interaction Atlas (MIA) of This DOT

3 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Complex neurodevelopmental disorder DISB9AFI Definitive Autosomal dominant [1]
Pierpont syndrome DISD1WJ1 Definitive Autosomal dominant [2]
Intellectual disability, autosomal dominant 41 DISW6ZUD Strong Autosomal dominant [3]
------------------------------------------------------------------------------------
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
21 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [4]
Acetaminophen DMUIE76 Approved Acetaminophen decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [5]
Doxorubicin DMVP5YE Approved Doxorubicin decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [6]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [7]
Cisplatin DMRHGI9 Approved Cisplatin decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [8]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [9]
Hydrogen peroxide DM1NG5W Approved Hydrogen peroxide affects the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [11]
Methotrexate DM2TEOL Approved Methotrexate decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [12]
Zoledronate DMIXC7G Approved Zoledronate increases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [13]
Menadione DMSJDTY Approved Menadione affects the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [14]
Panobinostat DM58WKG Approved Panobinostat affects the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [15]
Isotretinoin DM4QTBN Approved Isotretinoin increases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [17]
Melphalan DMOLNHF Approved Melphalan decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [18]
(+)-JQ1 DM1CZSJ Phase 1 (+)-JQ1 decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [20]
Leflunomide DMR8ONJ Phase 1 Trial Leflunomide increases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [21]
Torcetrapib DMDHYM7 Discontinued in Phase 2 Torcetrapib increases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [22]
Bisphenol A DM2ZLD7 Investigative Bisphenol A increases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [23]
Trichostatin A DM9C8NX Investigative Trichostatin A decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [24]
Formaldehyde DM7Q6M0 Investigative Formaldehyde decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [25]
Glyphosate DM0AFY7 Investigative Glyphosate decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [26]
AHPN DM8G6O4 Investigative AHPN decreases the expression of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [27]
------------------------------------------------------------------------------------
⏷ Show the Full List of 21 Drug(s)
3 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Arsenic DMTL2Y1 Approved Arsenic affects the methylation of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [10]
Fulvestrant DM0YZC6 Approved Fulvestrant increases the methylation of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [16]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene decreases the methylation of F-box-like/WD repeat-containing protein TBL1XR1 (TBL1XR1). [19]
------------------------------------------------------------------------------------

References

1 Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020 Feb;22(2):245-257. doi: 10.1038/s41436-019-0686-8. Epub 2019 Nov 6.
2 Pierpont syndrome associated with the p.Tyr446Cys missense mutation in TBL1XR1. Eur J Med Genet. 2017 Oct;60(10):504-508. doi: 10.1016/j.ejmg.2017.07.003. Epub 2017 Jul 4.
3 Multiplex targeted sequencing identifies recurrently mutated genes in autism spectrum disorders. Science. 2012 Dec 21;338(6114):1619-22. doi: 10.1126/science.1227764. Epub 2012 Nov 15.
4 Human embryonic stem cell-derived test systems for developmental neurotoxicity: a transcriptomics approach. Arch Toxicol. 2013 Jan;87(1):123-43.
5 Gene expression analysis of precision-cut human liver slices indicates stable expression of ADME-Tox related genes. Toxicol Appl Pharmacol. 2011 May 15;253(1):57-69.
6 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
7 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
8 The thioxotriazole copper(II) complex A0 induces endoplasmic reticulum stress and paraptotic death in human cancer cells. J Biol Chem. 2009 Sep 4;284(36):24306-19.
9 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
10 Prenatal arsenic exposure and the epigenome: identifying sites of 5-methylcytosine alterations that predict functional changes in gene expression in newborn cord blood and subsequent birth outcomes. Toxicol Sci. 2015 Jan;143(1):97-106. doi: 10.1093/toxsci/kfu210. Epub 2014 Oct 10.
11 Global gene expression analysis reveals differences in cellular responses to hydroxyl- and superoxide anion radical-induced oxidative stress in caco-2 cells. Toxicol Sci. 2010 Apr;114(2):193-203. doi: 10.1093/toxsci/kfp309. Epub 2009 Dec 31.
12 Global molecular effects of tocilizumab therapy in rheumatoid arthritis synovium. Arthritis Rheumatol. 2014 Jan;66(1):15-23.
13 The proapoptotic effect of zoledronic acid is independent of either the bone microenvironment or the intrinsic resistance to bortezomib of myeloma cells and is enhanced by the combination with arsenic trioxide. Exp Hematol. 2011 Jan;39(1):55-65.
14 Time series analysis of oxidative stress response patterns in HepG2: a toxicogenomics approach. Toxicology. 2013 Apr 5;306:24-34.
15 The Bromodomain Inhibitor JQ1 and the Histone Deacetylase Inhibitor Panobinostat Synergistically Reduce N-Myc Expression and Induce Anticancer Effects. Clin Cancer Res. 2016 May 15;22(10):2534-44. doi: 10.1158/1078-0432.CCR-15-1666. Epub 2016 Jan 5.
16 DNA methylome-wide alterations associated with estrogen receptor-dependent effects of bisphenols in breast cancer. Clin Epigenetics. 2019 Oct 10;11(1):138. doi: 10.1186/s13148-019-0725-y.
17 Temporal changes in gene expression in the skin of patients treated with isotretinoin provide insight into its mechanism of action. Dermatoendocrinol. 2009 May;1(3):177-87.
18 Bone marrow osteoblast damage by chemotherapeutic agents. PLoS One. 2012;7(2):e30758. doi: 10.1371/journal.pone.0030758. Epub 2012 Feb 17.
19 Air pollution and DNA methylation alterations in lung cancer: A systematic and comparative study. Oncotarget. 2017 Jan 3;8(1):1369-1391. doi: 10.18632/oncotarget.13622.
20 Targeting MYCN in neuroblastoma by BET bromodomain inhibition. Cancer Discov. 2013 Mar;3(3):308-23.
21 Endoplasmic reticulum stress and MAPK signaling pathway activation underlie leflunomide-induced toxicity in HepG2 Cells. Toxicology. 2017 Dec 1;392:11-21.
22 Clarifying off-target effects for torcetrapib using network pharmacology and reverse docking approach. BMC Syst Biol. 2012 Dec 10;6:152.
23 Bisphenol A Exposure Changes the Transcriptomic and Proteomic Dynamics of Human Retinoblastoma Y79 Cells. Genes (Basel). 2021 Feb 11;12(2):264. doi: 10.3390/genes12020264.
24 From transient transcriptome responses to disturbed neurodevelopment: role of histone acetylation and methylation as epigenetic switch between reversible and irreversible drug effects. Arch Toxicol. 2014 Jul;88(7):1451-68.
25 Characterization of formaldehyde's genotoxic mode of action by gene expression analysis in TK6 cells. Arch Toxicol. 2013 Nov;87(11):1999-2012.
26 Glyphosate-based herbicides at low doses affect canonical pathways in estrogen positive and negative breast cancer cell lines. PLoS One. 2019 Jul 11;14(7):e0219610. doi: 10.1371/journal.pone.0219610. eCollection 2019.
27 ST1926, a novel and orally active retinoid-related molecule inducing apoptosis in myeloid leukemia cells: modulation of intracellular calcium homeostasis. Blood. 2004 Jan 1;103(1):194-207.