General Information of Drug Off-Target (DOT) (ID: OTF3YK7V)

DOT Name Histone H2A type 1-C (H2AC6)
Synonyms H2A-clustered histone 6; Histone H2A/l
Gene Name H2AC6
Related Disease
Gout ( )
Narcolepsy ( )
Schizophrenia ( )
Lung carcinoma ( )
Lung squamous cell carcinoma ( )
UniProt ID
H2A1C_HUMAN
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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PDB ID
6C0W; 6MUO; 6MUP; 6UPK; 6UPL; 7A08; 7PII; 7R5R; 7U46; 7U47; 7U4D; 7Y8R; 7YWX; 7YYH; 8OO7; 8OOA; 8OOP; 8OOS; 8OX0; 8OX1
Pfam ID
PF00125 ; PF16211
Sequence
MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
TESHHKAKGK
Function
Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
KEGG Pathway
ATP-dependent chromatin remodeling (hsa03082 )
Necroptosis (hsa04217 )
Neutrophil extracellular trap formation (hsa04613 )
Alcoholism (hsa05034 )
Systemic lupus erythematosus (hsa05322 )
Reactome Pathway
Cleavage of the damaged pyrimidine (R-HSA-110329 )
Recognition and association of DNA glycosylase with site containing an affected purine (R-HSA-110330 )
Cleavage of the damaged purine (R-HSA-110331 )
Meiotic synapsis (R-HSA-1221632 )
Packaging Of Telomere Ends (R-HSA-171306 )
Pre-NOTCH Transcription and Translation (R-HSA-1912408 )
Formation of the beta-catenin (R-HSA-201722 )
PRC2 methylates histones and DNA (R-HSA-212300 )
Condensation of Prophase Chromosomes (R-HSA-2299718 )
Oxidative Stress Induced Senescence (R-HSA-2559580 )
Senescence-Associated Secretory Phenotype (SASP) (R-HSA-2559582 )
DNA Damage/Telomere Stress Induced Senescence (R-HSA-2559586 )
HDACs deacetylate histones (R-HSA-3214815 )
HATs acetylate histones (R-HSA-3214847 )
RMTs methylate histone arginines (R-HSA-3214858 )
SIRT1 negatively regulates rRNA expression (R-HSA-427359 )
ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression (R-HSA-427389 )
NoRC negatively regulates rRNA expression (R-HSA-427413 )
B-WICH complex positively regulates rRNA expression (R-HSA-5250924 )
DNA methylation (R-HSA-5334118 )
Transcriptional regulation by small RNAs (R-HSA-5578749 )
Activation of anterior HOX genes in hindbrain development during early embryogenesis (R-HSA-5617472 )
Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3 (R-HSA-5625886 )
UCH proteinases (R-HSA-5689603 )
Ub-specific processing proteases (R-HSA-5689880 )
Metalloprotease DUBs (R-HSA-5689901 )
Deposition of new CENPA-containing nucleosomes at the centromere (R-HSA-606279 )
Assembly of the ORC complex at the origin of replication (R-HSA-68616 )
RNA Polymerase I Promoter Opening (R-HSA-73728 )
RNA Polymerase I Promoter Escape (R-HSA-73772 )
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function (R-HSA-8936459 )
RUNX1 regulates transcription of genes involved in differentiation of HSCs (R-HSA-8939236 )
Estrogen-dependent gene expression (R-HSA-9018519 )
Meiotic recombination (R-HSA-912446 )
HCMV Early Events (R-HSA-9609690 )
HCMV Late Events (R-HSA-9610379 )
Transcriptional regulation of granulopoiesis (R-HSA-9616222 )
Inhibition of DNA recombination at telomere (R-HSA-9670095 )
Defective pyroptosis (R-HSA-9710421 )
Amyloid fiber formation (R-HSA-977225 )
Chromatin modifications during the maternal to zygotic transition (MZT) (R-HSA-9821002 )
Recognition and association of DNA glycosylase with site containing an affected pyrimidine (R-HSA-110328 )

Molecular Interaction Atlas (MIA) of This DOT

5 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Gout DISHC0U7 Strong Genetic Variation [1]
Narcolepsy DISLCNLI Strong Genetic Variation [2]
Schizophrenia DISSRV2N Strong Genetic Variation [3]
Lung carcinoma DISTR26C Limited Genetic Variation [4]
Lung squamous cell carcinoma DISXPIBD Limited Genetic Variation [4]
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Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
31 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the expression of Histone H2A type 1-C (H2AC6). [5]
Tretinoin DM49DUI Approved Tretinoin decreases the expression of Histone H2A type 1-C (H2AC6). [6]
Acetaminophen DMUIE76 Approved Acetaminophen increases the expression of Histone H2A type 1-C (H2AC6). [7]
Doxorubicin DMVP5YE Approved Doxorubicin increases the expression of Histone H2A type 1-C (H2AC6). [8]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate increases the expression of Histone H2A type 1-C (H2AC6). [9]
Cisplatin DMRHGI9 Approved Cisplatin decreases the expression of Histone H2A type 1-C (H2AC6). [10]
Estradiol DMUNTE3 Approved Estradiol decreases the expression of Histone H2A type 1-C (H2AC6). [11]
Quercetin DM3NC4M Approved Quercetin decreases the expression of Histone H2A type 1-C (H2AC6). [13]
Vorinostat DMWMPD4 Approved Vorinostat decreases the expression of Histone H2A type 1-C (H2AC6). [14]
Marinol DM70IK5 Approved Marinol increases the expression of Histone H2A type 1-C (H2AC6). [15]
Zoledronate DMIXC7G Approved Zoledronate increases the expression of Histone H2A type 1-C (H2AC6). [16]
Demecolcine DMCZQGK Approved Demecolcine increases the expression of Histone H2A type 1-C (H2AC6). [17]
Irinotecan DMP6SC2 Approved Irinotecan decreases the expression of Histone H2A type 1-C (H2AC6). [18]
Gamolenic acid DMQN30Z Approved Gamolenic acid decreases the expression of Histone H2A type 1-C (H2AC6). [19]
Urethane DM7NSI0 Phase 4 Urethane increases the expression of Histone H2A type 1-C (H2AC6). [20]
Berberine DMC5Q8X Phase 4 Berberine decreases the expression of Histone H2A type 1-C (H2AC6). [21]
SNDX-275 DMH7W9X Phase 3 SNDX-275 decreases the expression of Histone H2A type 1-C (H2AC6). [22]
Genistein DM0JETC Phase 2/3 Genistein decreases the expression of Histone H2A type 1-C (H2AC6). [11]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene decreases the expression of Histone H2A type 1-C (H2AC6). [23]
(+)-JQ1 DM1CZSJ Phase 1 (+)-JQ1 decreases the expression of Histone H2A type 1-C (H2AC6). [24]
Leflunomide DMR8ONJ Phase 1 Trial Leflunomide increases the expression of Histone H2A type 1-C (H2AC6). [25]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 decreases the expression of Histone H2A type 1-C (H2AC6). [26]
THAPSIGARGIN DMDMQIE Preclinical THAPSIGARGIN increases the expression of Histone H2A type 1-C (H2AC6). [27]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the expression of Histone H2A type 1-C (H2AC6). [11]
Trichostatin A DM9C8NX Investigative Trichostatin A decreases the expression of Histone H2A type 1-C (H2AC6). [28]
Formaldehyde DM7Q6M0 Investigative Formaldehyde increases the expression of Histone H2A type 1-C (H2AC6). [17]
Coumestrol DM40TBU Investigative Coumestrol decreases the expression of Histone H2A type 1-C (H2AC6). [29]
Deguelin DMXT7WG Investigative Deguelin increases the expression of Histone H2A type 1-C (H2AC6). [30]
KOJIC ACID DMP84CS Investigative KOJIC ACID increases the expression of Histone H2A type 1-C (H2AC6). [31]
Okadaic acid DM47CO1 Investigative Okadaic acid decreases the expression of Histone H2A type 1-C (H2AC6). [32]
AM251 DMTAWHL Investigative AM251 increases the expression of Histone H2A type 1-C (H2AC6). [33]
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⏷ Show the Full List of 31 Drug(s)
1 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Arsenic DMTL2Y1 Approved Arsenic affects the methylation of Histone H2A type 1-C (H2AC6). [12]
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References

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2 A polymorphism in CCR1/CCR3 is associated with narcolepsy.Brain Behav Immun. 2015 Oct;49:148-55. doi: 10.1016/j.bbi.2015.05.003. Epub 2015 May 15.
3 Genome-wide association study identifies five new schizophrenia loci.Nat Genet. 2011 Sep 18;43(10):969-76. doi: 10.1038/ng.940.
4 Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes.Nat Genet. 2017 Jul;49(7):1126-1132. doi: 10.1038/ng.3892. Epub 2017 Jun 12.
5 Human embryonic stem cell-derived test systems for developmental neurotoxicity: a transcriptomics approach. Arch Toxicol. 2013 Jan;87(1):123-43.
6 Development of a neural teratogenicity test based on human embryonic stem cells: response to retinoic acid exposure. Toxicol Sci. 2011 Dec;124(2):370-7.
7 Gene expression analysis of precision-cut human liver slices indicates stable expression of ADME-Tox related genes. Toxicol Appl Pharmacol. 2011 May 15;253(1):57-69.
8 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
9 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
10 Activation of AIFM2 enhances apoptosis of human lung cancer cells undergoing toxicological stress. Toxicol Lett. 2016 Sep 6;258:227-236.
11 Convergent transcriptional profiles induced by endogenous estrogen and distinct xenoestrogens in breast cancer cells. Carcinogenesis. 2006 Aug;27(8):1567-78.
12 Prenatal arsenic exposure and the epigenome: identifying sites of 5-methylcytosine alterations that predict functional changes in gene expression in newborn cord blood and subsequent birth outcomes. Toxicol Sci. 2015 Jan;143(1):97-106. doi: 10.1093/toxsci/kfu210. Epub 2014 Oct 10.
13 Integrated assessment by multiple gene expression analysis of quercetin bioactivity on anticancer-related mechanisms in colon cancer cells in vitro. Eur J Nutr. 2005 Mar;44(3):143-56. doi: 10.1007/s00394-004-0503-1. Epub 2004 Apr 30.
14 Definition of transcriptome-based indices for quantitative characterization of chemically disturbed stem cell development: introduction of the STOP-Toxukn and STOP-Toxukk tests. Arch Toxicol. 2017 Feb;91(2):839-864.
15 JunD is involved in the antiproliferative effect of Delta9-tetrahydrocannabinol on human breast cancer cells. Oncogene. 2008 Aug 28;27(37):5033-44.
16 Interleukin-19 as a translational indicator of renal injury. Arch Toxicol. 2015 Jan;89(1):101-6.
17 Characterization of formaldehyde's genotoxic mode of action by gene expression analysis in TK6 cells. Arch Toxicol. 2013 Nov;87(11):1999-2012.
18 In vitro and in vivo irinotecan-induced changes in expression profiles of cell cycle and apoptosis-associated genes in acute myeloid leukemia cells. Mol Cancer Ther. 2005 Jun;4(6):885-900.
19 Antineoplastic effects of gamma linolenic Acid on hepatocellular carcinoma cell lines. J Clin Biochem Nutr. 2010 Jul;47(1):81-90.
20 Ethyl carbamate induces cell death through its effects on multiple metabolic pathways. Chem Biol Interact. 2017 Nov 1;277:21-32.
21 Berberine acts as a putative epigenetic modulator by affecting the histone code. Toxicol In Vitro. 2016 Oct;36:10-17. doi: 10.1016/j.tiv.2016.06.004. Epub 2016 Jun 13.
22 A transcriptome-based classifier to identify developmental toxicants by stem cell testing: design, validation and optimization for histone deacetylase inhibitors. Arch Toxicol. 2015 Sep;89(9):1599-618.
23 New insights into BaP-induced toxicity: role of major metabolites in transcriptomics and contribution to hepatocarcinogenesis. Arch Toxicol. 2016 Jun;90(6):1449-58.
24 BET bromodomain protein inhibition is a therapeutic option for medulloblastoma. Oncotarget. 2013 Nov;4(11):2080-95.
25 Endoplasmic reticulum stress and MAPK signaling pathway activation underlie leflunomide-induced toxicity in HepG2 Cells. Toxicology. 2017 Dec 1;392:11-21.
26 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
27 Endoplasmic reticulum stress impairs insulin signaling through mitochondrial damage in SH-SY5Y cells. Neurosignals. 2012;20(4):265-80.
28 From transient transcriptome responses to disturbed neurodevelopment: role of histone acetylation and methylation as epigenetic switch between reversible and irreversible drug effects. Arch Toxicol. 2014 Jul;88(7):1451-68.
29 Pleiotropic combinatorial transcriptomes of human breast cancer cells exposed to mixtures of dietary phytoestrogens. Food Chem Toxicol. 2009 Apr;47(4):787-95.
30 Neurotoxicity and underlying cellular changes of 21 mitochondrial respiratory chain inhibitors. Arch Toxicol. 2021 Feb;95(2):591-615. doi: 10.1007/s00204-020-02970-5. Epub 2021 Jan 29.
31 Toxicogenomics of kojic acid on gene expression profiling of a375 human malignant melanoma cells. Biol Pharm Bull. 2006 Apr;29(4):655-69.
32 Whole genome mRNA transcriptomics analysis reveals different modes of action of the diarrheic shellfish poisons okadaic acid and dinophysis toxin-1 versus azaspiracid-1 in Caco-2 cells. Toxicol In Vitro. 2018 Feb;46:102-112.
33 Cannabinoid derivatives induce cell death in pancreatic MIA PaCa-2 cells via a receptor-independent mechanism. FEBS Lett. 2006 Mar 20;580(7):1733-9.