General Information of Drug Off-Target (DOT) (ID: OT8OSVYU)

DOT Name 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB)
Synonyms EC 1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta
Gene Name BCKDHB
Related Disease
Maple syrup urine disease ( )
Maple syrup urine disease type 1B ( )
Advanced cancer ( )
Coeliac disease ( )
Hepatitis B virus infection ( )
Hepatocellular carcinoma ( )
Neoplasm ( )
Pancreatic cancer ( )
Systemic lupus erythematosus ( )
Thyroid gland undifferentiated (anaplastic) carcinoma ( )
Adenovirus infection ( )
Female hypogonadism ( )
Classic maple syrup urine disease ( )
Intermediate maple syrup urine disease ( )
Intermittent maple syrup urine disease ( )
Thiamine-responsive maple syrup urine disease ( )
UniProt ID
ODBB_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
PDB ID
1DTW; 1OLS; 1OLU; 1OLX; 1U5B; 1V11; 1V16; 1V1M; 1V1R; 1WCI; 1X7W; 1X7X; 1X7Y; 1X7Z; 1X80; 2BEU; 2BEV; 2BEW; 2BFB; 2BFC; 2BFD; 2BFE; 2BFF; 2J9F
EC Number
1.2.4.4
Pfam ID
PF02779 ; PF02780
Sequence
MAVVAAAAGWLLRLRAAGAEGHWRRLPGAGLARGFLHPAATVEDAAQRRQVAHFTFQPDP
EPREYGQTQKMNLFQSVTSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVF
NTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSL
TIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEP
KILYRAAAEEVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAKEKLGVSCE
VIDLRTIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRV
CGYDTPFPHIFEPFYIPDKWKCYDALRKMINY
Function
Together with BCKDHA forms the heterotetrameric E1 subunit of the mitochondrial branched-chain alpha-ketoacid dehydrogenase (BCKD) complex. The BCKD complex catalyzes the multi-step oxidative decarboxylation of alpha-ketoacids derived from the branched-chain amino-acids valine, leucine and isoleucine producing CO2 and acyl-CoA which is subsequently utilized to produce energy. The E1 subunit catalyzes the first step with the decarboxylation of the alpha-ketoacid forming an enzyme-product intermediate. A reductive acylation mediated by the lipoylamide cofactor of E2 extracts the acyl group from the E1 active site for the next step of the reaction.
KEGG Pathway
Valine, leucine and isoleucine degradation (hsa00280 )
Propanoate metabolism (hsa00640 )
Lipoic acid metabolism (hsa00785 )
Metabolic pathways (hsa01100 )
2-Oxocarboxylic acid metabolism (hsa01210 )
Reactome Pathway
Branched-chain amino acid catabolism (R-HSA-70895 )
Glyoxylate metabolism and glycine degradation (R-HSA-389661 )
BioCyc Pathway
MetaCyc:MONOMER-12006

Molecular Interaction Atlas (MIA) of This DOT

16 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Maple syrup urine disease DIS61XRH Definitive Autosomal recessive [1]
Maple syrup urine disease type 1B DISGPKK3 Definitive Autosomal recessive [2]
Advanced cancer DISAT1Z9 Strong Genetic Variation [3]
Coeliac disease DISIY60C Strong Biomarker [4]
Hepatitis B virus infection DISLQ2XY Strong Biomarker [5]
Hepatocellular carcinoma DIS0J828 Strong Biomarker [6]
Neoplasm DISZKGEW Strong Altered Expression [7]
Pancreatic cancer DISJC981 Strong Biomarker [8]
Systemic lupus erythematosus DISI1SZ7 Strong Posttranslational Modification [9]
Thyroid gland undifferentiated (anaplastic) carcinoma DISYBB1W Strong Biomarker [10]
Adenovirus infection DISUYSBZ moderate Biomarker [11]
Female hypogonadism DISWASB4 moderate Genetic Variation [12]
Classic maple syrup urine disease DIS848CW Supportive Autosomal recessive [13]
Intermediate maple syrup urine disease DIS5SRXS Supportive Autosomal recessive [13]
Intermittent maple syrup urine disease DISJEHB2 Supportive Autosomal recessive [13]
Thiamine-responsive maple syrup urine disease DISEL4MR Supportive Autosomal recessive [13]
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⏷ Show the Full List of 16 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
This DOT Affected the Drug Response of 1 Drug(s)
Drug Name Drug ID Highest Status Interaction REF
Chlorothiazide DMLHESP Approved 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB) increases the Metabolic disorder ADR of Chlorothiazide. [28]
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1 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the methylation of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [14]
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13 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [15]
Tretinoin DM49DUI Approved Tretinoin decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [16]
Acetaminophen DMUIE76 Approved Acetaminophen decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [17]
Doxorubicin DMVP5YE Approved Doxorubicin decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [18]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [19]
Cisplatin DMRHGI9 Approved Cisplatin decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [20]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [21]
Isotretinoin DM4QTBN Approved Isotretinoin decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [22]
Urethane DM7NSI0 Phase 4 Urethane decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [23]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [24]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [25]
Formaldehyde DM7Q6M0 Investigative Formaldehyde decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [26]
Coumestrol DM40TBU Investigative Coumestrol decreases the expression of 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (BCKDHB). [27]
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⏷ Show the Full List of 13 Drug(s)

References

1 Flexible and scalable diagnostic filtering of genomic variants using G2P with Ensembl VEP. Nat Commun. 2019 May 30;10(1):2373. doi: 10.1038/s41467-019-10016-3.
2 Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020 Feb;22(2):245-257. doi: 10.1038/s41436-019-0686-8. Epub 2019 Nov 6.
3 Targeting Gene-Viro-Therapy with AFP driving Apoptin gene shows potent antitumor effect in hepatocarcinoma.J Biomed Sci. 2012 Feb 9;19(1):20. doi: 10.1186/1423-0127-19-20.
4 Lack of a serologic response to an E1B protein of adenovirus 12 in coeliac disease.Scand J Gastroenterol. 1989 Apr;24(3):282-6. doi: 10.3109/00365528909093047.
5 Transgenic mouse models of human gastric and hepatic carcinomas.Semin Cancer Biol. 1994 Feb;5(1):61-8.
6 Target gene therapy for alpha-fetoprotein-producing hepatocellular carcinoma by E1B55k-attenuated adenovirus.Biochem Biophys Res Commun. 2001 Mar 30;282(2):529-35. doi: 10.1006/bbrc.2001.4573.
7 Telomerase-specific replication-selective virotherapy for human cancer. Clin Cancer Res. 2004 Jan 1;10(1 Pt 1):285-92.
8 Oncolytic replication-competent adenovirus suppresses tumor angiogenesis through preserved E1A region.Cancer Gene Ther. 2006 Mar;13(3):242-52. doi: 10.1038/sj.cgt.7700902.
9 IL-6 modulates CD5 expression in B cells from patients with lupus by regulating DNA methylation.J Immunol. 2009 May 1;182(9):5623-32. doi: 10.4049/jimmunol.0802412.
10 ONYX-015, an E1B gene-defective adenovirus, induces cell death in human anaplastic thyroid carcinoma cell lines.J Clin Endocrinol Metab. 2002 Jun;87(6):2525-31. doi: 10.1210/jcem.87.6.8529.
11 p53-independent apoptotic and necrotic cell deaths induced by adenovirus infection: suppression by E1B 19K and Bcl-2 proteins.Cell Growth Differ. 1995 Feb;6(2):131-7.
12 Branched chain alpha-keto acid dehydrogenase, E1-beta subunit gene is associated with premature ovarian failure.Fertil Steril. 2008 Mar;89(3):728-31. doi: 10.1016/j.fertnstert.2007.03.063. Epub 2007 May 24.
13 Maple Syrup Urine Disease. 2006 Jan 30 [updated 2020 Apr 23]. In: Adam MP, Feldman J, Mirzaa GM, Pagon RA, Wallace SE, Bean LJH, Gripp KW, Amemiya A, editors. GeneReviews(?) [Internet]. Seattle (WA): University of Washington, Seattle; 1993C2024.
14 Integrative omics data analyses of repeated dose toxicity of valproic acid in vitro reveal new mechanisms of steatosis induction. Toxicology. 2018 Jan 15;393:160-170.
15 Comparison of HepG2 and HepaRG by whole-genome gene expression analysis for the purpose of chemical hazard identification. Toxicol Sci. 2010 May;115(1):66-79.
16 Transcriptional and Metabolic Dissection of ATRA-Induced Granulocytic Differentiation in NB4 Acute Promyelocytic Leukemia Cells. Cells. 2020 Nov 5;9(11):2423. doi: 10.3390/cells9112423.
17 Multiple microRNAs function as self-protective modules in acetaminophen-induced hepatotoxicity in humans. Arch Toxicol. 2018 Feb;92(2):845-858.
18 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
19 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
20 Characterisation of cisplatin-induced transcriptomics responses in primary mouse hepatocytes, HepG2 cells and mouse embryonic stem cells shows conservation of regulating transcription factor networks. Mutagenesis. 2014 Jan;29(1):17-26.
21 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
22 Temporal changes in gene expression in the skin of patients treated with isotretinoin provide insight into its mechanism of action. Dermatoendocrinol. 2009 May;1(3):177-87.
23 Ethyl carbamate induces cell death through its effects on multiple metabolic pathways. Chem Biol Interact. 2017 Nov 1;277:21-32.
24 Benzo[a]pyrene-induced changes in microRNA-mRNA networks. Chem Res Toxicol. 2012 Apr 16;25(4):838-49.
25 Alternatives for the worse: Molecular insights into adverse effects of bisphenol a and substitutes during human adipocyte differentiation. Environ Int. 2021 Nov;156:106730. doi: 10.1016/j.envint.2021.106730. Epub 2021 Jun 27.
26 Characterization of formaldehyde's genotoxic mode of action by gene expression analysis in TK6 cells. Arch Toxicol. 2013 Nov;87(11):1999-2012.
27 Pleiotropic combinatorial transcriptomes of human breast cancer cells exposed to mixtures of dietary phytoestrogens. Food Chem Toxicol. 2009 Apr;47(4):787-95.
28 Genome-wide association analyses suggest NELL1 influences adverse metabolic response to HCTZ in African Americans. Pharmacogenomics J. 2014 Feb;14(1):35-40. doi: 10.1038/tpj.2013.3. Epub 2013 Feb 12.