General Information of Drug Off-Target (DOT) (ID: OTJFVU43)

DOT Name Cyclin-F (CCNF)
Synonyms F-box only protein 1
Gene Name CCNF
Related Disease
Hepatocellular carcinoma ( )
Breast cancer ( )
Breast carcinoma ( )
Frontotemporal dementia ( )
Frontotemporal dementia and/or amyotrophic lateral sclerosis 5 ( )
Glioma ( )
Pick disease ( )
Polycystic kidney disease ( )
Polycystic kidney disease 1 ( )
Advanced cancer ( )
Amyotrophic lateral sclerosis ( )
Cutaneous melanoma ( )
Melanoma ( )
UniProt ID
CCNF_HUMAN
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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Pfam ID
PF02984 ; PF00134 ; PF12937
Sequence
MGSGGVVHCRCAKCFCYPTKRRIRRRPRNLTILSLPEDVLFHILKWLSVEDILAVRAVHS
QLKDLVDNHASVWACASFQELWPSPGNLKLFERAAEKGNFEAAVKLGIAYLYNEGLSVSD
EARAEVNGLKASRFFSLAERLNVGAAPFIWLFIRPPWSVSGSCCKAVVHESLRAECQLQR
THKASILHCLGRVLSLFEDEEKQQQAHDLFEEAAHQGCLTSSYLLWESDRRTDVSDPGRC
LHSFRKLRDYAAKGCWEAQLSLAKACANANQLGLEVRASSEIVCQLFQASQAVSKQQVFS
VQKGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACM
VICTRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTL
VPVELRTQHLCSFLCELSLLHTSLSAYAPARLAAAALLLARLTHGQTQPWTTQLWDLTGF
SYEDLIPCVLSLHKKCFHDDAPKDYRQVSLTAVKQRFEDKRYGEISQEEVLSYSQLCAAL
GVTQDSPDPPTFLSTGEIHAFLSSPSGRRTKRKRENSLQEDRGSFVTTPTAELSSQEETL
LGSFLDWSLDCCSGYEGDQESEGEKEGDVTAPSGILDVTVVYLNPEQHCCQESSDEEACP
EDKGPQDPQALALDTQIPATPGPKPLVRTSREPGKDVTTSGYSSVSTASPTSSVDGGLGA
LPQPTSVLSLDSDSHTQPCHHQARKSCLQCRPPSPPESSVPQQQVKRINLCIHSEEEDMN
LGLVRL
Function
Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. The SCF(CCNF) E3 ubiquitin-protein ligase complex is an integral component of the ubiquitin proteasome system (UPS) and links proteasome degradation to the cell cycle. Mediates the substrate recognition and the proteasomal degradation of various target proteins involved in the regulation of cell cycle progression and in the maintenance of genome stability. Mediates the ubiquitination and proteasomal degradation of CP110 during G2 phase, thereby acting as an inhibitor of centrosome reduplication. In G2, mediates the ubiquitination and subsequent degradation of ribonucleotide reductase RRM2, thereby maintaining a balanced pool of dNTPs and genome integrity. In G2, mediates the ubiquitination and proteasomal degradation of CDC6, thereby suppressing DNA re-replication and preventing genome instability. Involved in the ubiquitination and degradation of the substrate adapter CDH1 of the anaphase-promoting complex (APC/C), thereby acting as an antagonist of APC/C in regulating G1 progression and S phase entry. May play a role in the G2 cell cycle checkpoint control after DNA damage, possibly by promoting the ubiquitination of MYBL2/BMYB.
Tissue Specificity Widely expressed, with expression detected in the heart, brain, placenta, lung, liver, skeletal muscle, kidney and pancreas.
Reactome Pathway
Antigen processing (R-HSA-983168 )
Neddylation (R-HSA-8951664 )

Molecular Interaction Atlas (MIA) of This DOT

13 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Hepatocellular carcinoma DIS0J828 Definitive Biomarker [1]
Breast cancer DIS7DPX1 Strong Biomarker [2]
Breast carcinoma DIS2UE88 Strong Biomarker [2]
Frontotemporal dementia DISKYHXL Strong Genetic Variation [3]
Frontotemporal dementia and/or amyotrophic lateral sclerosis 5 DISM2TT8 Strong Autosomal dominant [4]
Glioma DIS5RPEH Strong Altered Expression [5]
Pick disease DISP6X50 Strong Genetic Variation [6]
Polycystic kidney disease DISWS3UY Strong Genetic Variation [7]
Polycystic kidney disease 1 DIS9FB3R Strong Genetic Variation [7]
Advanced cancer DISAT1Z9 moderate Biomarker [5]
Amyotrophic lateral sclerosis DISF7HVM Supportive Autosomal dominant [4]
Cutaneous melanoma DIS3MMH9 Limited Biomarker [8]
Melanoma DIS1RRCY Limited Altered Expression [8]
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⏷ Show the Full List of 13 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
This DOT Affected the Drug Response of 2 Drug(s)
Drug Name Drug ID Highest Status Interaction REF
Fluorouracil DMUM7HZ Approved Cyclin-F (CCNF) affects the response to substance of Fluorouracil. [36]
Topotecan DMP6G8T Approved Cyclin-F (CCNF) affects the response to substance of Topotecan. [37]
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1 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate increases the methylation of Cyclin-F (CCNF). [9]
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29 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of Cyclin-F (CCNF). [10]
Tretinoin DM49DUI Approved Tretinoin decreases the expression of Cyclin-F (CCNF). [11]
Acetaminophen DMUIE76 Approved Acetaminophen increases the expression of Cyclin-F (CCNF). [12]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of Cyclin-F (CCNF). [13]
Cisplatin DMRHGI9 Approved Cisplatin decreases the expression of Cyclin-F (CCNF). [14]
Quercetin DM3NC4M Approved Quercetin decreases the expression of Cyclin-F (CCNF). [15]
Temozolomide DMKECZD Approved Temozolomide increases the expression of Cyclin-F (CCNF). [16]
Arsenic trioxide DM61TA4 Approved Arsenic trioxide decreases the expression of Cyclin-F (CCNF). [17]
Calcitriol DM8ZVJ7 Approved Calcitriol decreases the expression of Cyclin-F (CCNF). [18]
Testosterone DM7HUNW Approved Testosterone decreases the expression of Cyclin-F (CCNF). [18]
Carbamazepine DMZOLBI Approved Carbamazepine affects the expression of Cyclin-F (CCNF). [19]
Decitabine DMQL8XJ Approved Decitabine decreases the expression of Cyclin-F (CCNF). [20]
Cannabidiol DM0659E Approved Cannabidiol decreases the expression of Cyclin-F (CCNF). [21]
Troglitazone DM3VFPD Approved Troglitazone decreases the expression of Cyclin-F (CCNF). [22]
Hydroquinone DM6AVR4 Approved Hydroquinone decreases the expression of Cyclin-F (CCNF). [23]
Irinotecan DMP6SC2 Approved Irinotecan decreases the expression of Cyclin-F (CCNF). [24]
Diclofenac DMPIHLS Approved Diclofenac affects the expression of Cyclin-F (CCNF). [19]
Palbociclib DMD7L94 Approved Palbociclib decreases the expression of Cyclin-F (CCNF). [25]
Tamibarotene DM3G74J Phase 3 Tamibarotene decreases the expression of Cyclin-F (CCNF). [11]
Seocalcitol DMKL9QO Phase 3 Seocalcitol decreases the expression of Cyclin-F (CCNF). [26]
Chlorpromazine DMBGZI3 Phase 3 Trial Chlorpromazine decreases the expression of Cyclin-F (CCNF). [27]
PEITC DMOMN31 Phase 2 PEITC decreases the expression of Cyclin-F (CCNF). [28]
Leflunomide DMR8ONJ Phase 1 Trial Leflunomide decreases the expression of Cyclin-F (CCNF). [29]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 decreases the expression of Cyclin-F (CCNF). [30]
THAPSIGARGIN DMDMQIE Preclinical THAPSIGARGIN decreases the expression of Cyclin-F (CCNF). [31]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the expression of Cyclin-F (CCNF). [32]
Formaldehyde DM7Q6M0 Investigative Formaldehyde decreases the expression of Cyclin-F (CCNF). [33]
Coumestrol DM40TBU Investigative Coumestrol increases the expression of Cyclin-F (CCNF). [34]
Phencyclidine DMQBEYX Investigative Phencyclidine decreases the expression of Cyclin-F (CCNF). [35]
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⏷ Show the Full List of 29 Drug(s)

References

1 Computational discovery of niclosamide ethanolamine, a repurposed drug candidate that reduces growth of hepatocellular carcinoma cells initro and in mice by inhibiting cell division cycle 37 signaling. Gastroenterology. 2017 Jun;152(8):2022-2036.
2 A genome-wide RNAi screen identifies novel targets of neratinib resistance leading to identification of potential drug resistant genetic markers.Mol Biosyst. 2012 Apr;8(5):1553-70. doi: 10.1039/c2mb05512k. Epub 2012 Mar 23.
3 Pathogenic mutation in the ALS/FTD gene, CCNF, causes elevated Lys48-linked ubiquitylation and defective autophagy.Cell Mol Life Sci. 2018 Jan;75(2):335-354. doi: 10.1007/s00018-017-2632-8. Epub 2017 Aug 29.
4 CCNF mutations in amyotrophic lateral sclerosis and frontotemporal dementia. Nat Commun. 2016 Apr 15;7:11253. doi: 10.1038/ncomms11253.
5 Cyclin F-Dependent Degradation of RBPJ Inhibits IDH1(R132H)-Mediated Tumorigenesis.Cancer Res. 2018 Nov 15;78(22):6386-6398. doi: 10.1158/0008-5472.CAN-18-1772. Epub 2018 Sep 25.
6 Mutations of CCNF gene is rare in patients with amyotrophic lateral sclerosis and frontotemporal dementia from Mainland China.Amyotroph Lateral Scler Frontotemporal Degener. 2017 May;18(3-4):265-268. doi: 10.1080/21678421.2017.1293111. Epub 2017 Mar 10.
7 A novel cyclin gene (CCNF) in the region of the polycystic kidney disease gene (PKD1).Genomics. 1994 Nov 1;24(1):27-33. doi: 10.1006/geno.1994.1578.
8 Potential role of cyclin F mRNA expression in the survival of skin melanoma patients: Comprehensive analysis of the pathways altered due to cyclin F upregulation.Oncol Rep. 2018 Jul;40(1):123-144. doi: 10.3892/or.2018.6435. Epub 2018 May 16.
9 Integrative omics data analyses of repeated dose toxicity of valproic acid in vitro reveal new mechanisms of steatosis induction. Toxicology. 2018 Jan 15;393:160-170.
10 Integrating multiple omics to unravel mechanisms of Cyclosporin A induced hepatotoxicity in vitro. Toxicol In Vitro. 2015 Apr;29(3):489-501.
11 Differential modulation of PI3-kinase/Akt pathway during all-trans retinoic acid- and Am80-induced HL-60 cell differentiation revealed by DNA microarray analysis. Biochem Pharmacol. 2004 Dec 1;68(11):2177-86.
12 Predictive toxicology using systemic biology and liver microfluidic "on chip" approaches: application to acetaminophen injury. Toxicol Appl Pharmacol. 2012 Mar 15;259(3):270-80.
13 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
14 Low doses of cisplatin induce gene alterations, cell cycle arrest, and apoptosis in human promyelocytic leukemia cells. Biomark Insights. 2016 Aug 24;11:113-21.
15 Inhibition of prostate cancer cell colony formation by the flavonoid quercetin correlates with modulation of specific regulatory genes. Clin Diagn Lab Immunol. 2004 Jan;11(1):63-9. doi: 10.1128/cdli.11.1.63-69.2004.
16 Temozolomide induces activation of Wnt/-catenin signaling in glioma cells via PI3K/Akt pathway: implications in glioma therapy. Cell Biol Toxicol. 2020 Jun;36(3):273-278. doi: 10.1007/s10565-019-09502-7. Epub 2019 Nov 22.
17 Redistribution of cell cycle by arsenic trioxide is associated with demethylation and expression changes of cell cycle related genes in acute promyelocytic leukemia cell line (NB4). Ann Hematol. 2018 Jan;97(1):83-93. doi: 10.1007/s00277-017-3163-y. Epub 2017 Nov 20.
18 Effects of 1alpha,25 dihydroxyvitamin D3 and testosterone on miRNA and mRNA expression in LNCaP cells. Mol Cancer. 2011 May 18;10:58.
19 Drug-induced endoplasmic reticulum and oxidative stress responses independently sensitize toward TNF-mediated hepatotoxicity. Toxicol Sci. 2014 Jul;140(1):144-59. doi: 10.1093/toxsci/kfu072. Epub 2014 Apr 20.
20 DNA methylation inhibits p53-mediated survivin repression. Oncogene. 2009 May 14;28(19):2046-50. doi: 10.1038/onc.2009.62. Epub 2009 Apr 13.
21 Cannabidiol enhances cytotoxicity of anti-cancer drugs in human head and neck squamous cell carcinoma. Sci Rep. 2020 Nov 26;10(1):20622. doi: 10.1038/s41598-020-77674-y.
22 Effects of ciglitazone and troglitazone on the proliferation of human stomach cancer cells. World J Gastroenterol. 2009 Jan 21;15(3):310-20.
23 In vitro effects of aldehydes present in tobacco smoke on gene expression in human lung alveolar epithelial cells. Toxicol In Vitro. 2013 Apr;27(3):1072-81.
24 In vitro and in vivo irinotecan-induced changes in expression profiles of cell cycle and apoptosis-associated genes in acute myeloid leukemia cells. Mol Cancer Ther. 2005 Jun;4(6):885-900.
25 Cdk4/6 inhibition induces epithelial-mesenchymal transition and enhances invasiveness in pancreatic cancer cells. Mol Cancer Ther. 2012 Oct;11(10):2138-48. doi: 10.1158/1535-7163.MCT-12-0562. Epub 2012 Aug 6.
26 Expression profiling in squamous carcinoma cells reveals pleiotropic effects of vitamin D3 analog EB1089 signaling on cell proliferation, differentiation, and immune system regulation. Mol Endocrinol. 2002 Jun;16(6):1243-56.
27 Effects of chlorpromazine with and without UV irradiation on gene expression of HepG2 cells. Mutat Res. 2005 Aug 4;575(1-2):47-60. doi: 10.1016/j.mrfmmm.2005.03.002. Epub 2005 Apr 26.
28 Phenethyl isothiocyanate alters the gene expression and the levels of protein associated with cell cycle regulation in human glioblastoma GBM 8401 cells. Environ Toxicol. 2017 Jan;32(1):176-187.
29 Endoplasmic reticulum stress and MAPK signaling pathway activation underlie leflunomide-induced toxicity in HepG2 Cells. Toxicology. 2017 Dec 1;392:11-21.
30 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
31 Endoplasmic reticulum stress impairs insulin signaling through mitochondrial damage in SH-SY5Y cells. Neurosignals. 2012;20(4):265-80.
32 Bisphenol A induces DSB-ATM-p53 signaling leading to cell cycle arrest, senescence, autophagy, stress response, and estrogen release in human fetal lung fibroblasts. Arch Toxicol. 2018 Apr;92(4):1453-1469.
33 Characterization of formaldehyde's genotoxic mode of action by gene expression analysis in TK6 cells. Arch Toxicol. 2013 Nov;87(11):1999-2012.
34 Pleiotropic combinatorial transcriptomes of human breast cancer cells exposed to mixtures of dietary phytoestrogens. Food Chem Toxicol. 2009 Apr;47(4):787-95.
35 Differential response of Mono Mac 6, BEAS-2B, and Jurkat cells to indoor dust. Environ Health Perspect. 2007 Sep;115(9):1325-32.
36 Molecular characterizations of derivatives of HCT116 colorectal cancer cells that are resistant to the chemotherapeutic agent 5-fluorouracil. Int J Oncol. 2004 May;24(5):1279-88.
37 Gene expression profiling of 30 cancer cell lines predicts resistance towards 11 anticancer drugs at clinically achieved concentrations. Int J Cancer. 2006 Apr 1;118(7):1699-712. doi: 10.1002/ijc.21570.