General Information of Drug (ID: DMQL8XJ)

Drug Name
Decitabine
Synonyms
AzadC; Dacogen; Dezocitidine; NCGC_5ADOC; Dacogen (TN); E-7373; Decitabine (USAN/INN); Dacogen, 5-aza-2'-deoxycytidine,NSC 127716, Dacogen, DAC, Decitabine; 2'-Deoxy-5-azacytidine; 4-Amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-1,3,5-triazin-2(1H)-one; 4-Amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-s-triazin-2(1H)-one; 4-Amino-1-(2-deoxy-beta-D-ribofuranosyl)-1,3,5-triazin-2(1H)-one; 4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,3,5-triazin-2-one; 5-AZAdC; 5-Aza-2′-Deoxycytidine; 5-Aza-2'-deoxycytidine; 5-Azadeoxycytidine; 5-Deoxy-2′-azacytidine; 5-aza-2-deoxycytidine; 5-aza-CdR; 5-aza-dC; 5A2dc
Indication
Disease Entry ICD 11 Status REF
Myelodysplastic syndrome 2A37 Approved [1], [2], [3]
Therapeutic Class
Anticancer Agents
Drug Type
Small molecular drug
Structure
3D MOL 2D MOL
#Ro5 Violations (Lipinski): 0 Molecular Weight (mw) 228.21
Topological Polar Surface Area (xlogp) -1.2
Rotatable Bond Count (rotbonds) 2
Hydrogen Bond Donor Count (hbonddonor) 3
Hydrogen Bond Acceptor Count (hbondacc) 4
ADMET Property
Absorption AUC
The area under the plot of plasma concentration (AUC) of drug is 1332 mcgh/L [4]
Absorption Cmax
The maximum plasma concentration (Cmax) of drug is 73.8 mcg/L [4]
Clearance
The drug present in the plasma can be removed from the body at the rate of 130 mL/min/kg [5]
Elimination
Less than 1% of administered decitabine is excreted in the urine [6]
Half-life
The concentration or amount of drug in body reduced by one-half in 0.62 hours [4]
Metabolism
The drug is metabolized via the sequential action of deoxycytidine kinase, nucleotide monophosphate kinase, and nucleotide diphosphate kinase [7]
MRTD
The Maximum Recommended Therapeutic Dose (MRTD) of drug that ensured maximising efficacy and moderate side effect is 4.8733 micromolar/kg/day [8]
Unbound Fraction
The unbound fraction of drug in plasma is 1% [5]
Vd
The volume of distribution (Vd) of drug is 4.59 +/- 1.42 L/kg [6]
Chemical Identifiers
Formula
C8H12N4O4
IUPAC Name
4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,3,5-triazin-2-one
Canonical SMILES
C1[C@@H]([C@H](O[C@H]1N2C=NC(=NC2=O)N)CO)O
InChI
InChI=1S/C8H12N4O4/c9-7-10-3-12(8(15)11-7)6-1-4(14)5(2-13)16-6/h3-6,13-14H,1-2H2,(H2,9,11,15)/t4-,5+,6+/m0/s1
InChIKey
XAUDJQYHKZQPEU-KVQBGUIXSA-N
Cross-matching ID
PubChem CID
451668
ChEBI ID
CHEBI:50131
CAS Number
2353-33-5
DrugBank ID
DB01262
TTD ID
D0X5XU
INTEDE ID
DR1763

Molecular Interaction Atlas of This Drug


Drug Therapeutic Target (DTT)
DTT Name DTT ID UniProt ID MOA REF
Human Deoxyribonucleic acid (hDNA) TTUTN1I NOUNIPROTAC Modulator [2]

Drug-Metabolizing Enzyme (DME)
DME Name DME ID UniProt ID MOA REF
Cytidine aminohydrolase (CDA) DEKEDRC CDD_HUMAN Substrate [9]
Cytidine deaminase (cdd) DEYILK4 E0TLJ6_MYCHH Substrate [10]
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This Drug

Drug-Drug Interaction (DDI) Information of This Drug

Coadministration of a Drug Treating the Disease Different from Decitabine (Comorbidity)
DDI Drug Name DDI Drug ID Severity Mechanism Comorbidity REF
Roflumilast DMPGHY8 Moderate Additive immunosuppressive effects by the combination of Decitabine and Roflumilast. Asthma [CA23] [25]
Teriflunomide DMQ2FKJ Major Additive myelosuppressive effects by the combination of Decitabine and Teriflunomide. Hyper-lipoproteinaemia [5C80] [26]
Denosumab DMNI0KO Moderate Additive myelosuppressive effects by the combination of Decitabine and Denosumab. Low bone mass disorder [FB83] [27]
Tecfidera DM2OVDT Moderate Additive immunosuppressive effects by the combination of Decitabine and Tecfidera. Multiple sclerosis [8A40] [28]
Siponimod DM2R86O Major Additive immunosuppressive effects by the combination of Decitabine and Siponimod. Multiple sclerosis [8A40] [29]
Fingolimod DM5JVAN Major Additive immunosuppressive effects by the combination of Decitabine and Fingolimod. Multiple sclerosis [8A40] [30]
Ocrelizumab DMEZ2KH Moderate Additive immunosuppressive effects by the combination of Decitabine and Ocrelizumab. Multiple sclerosis [8A40] [31]
Ozanimod DMT6AM2 Major Additive immunosuppressive effects by the combination of Decitabine and Ozanimod. Multiple sclerosis [8A40] [25]
Omacetaxine mepesuccinate DMPU2WX Moderate Additive immunosuppressive effects by the combination of Decitabine and Omacetaxine mepesuccinate. Myeloproliferative neoplasm [2A20] [32]
Canakinumab DM8HLO5 Moderate Additive immunosuppressive effects by the combination of Decitabine and Canakinumab. Rheumatoid arthritis [FA20] [33]
Rilonacept DMGLUQS Moderate Additive immunosuppressive effects by the combination of Decitabine and Rilonacept. Rheumatoid arthritis [FA20] [33]
Golimumab DMHZV7X Major Additive immunosuppressive effects by the combination of Decitabine and Golimumab. Rheumatoid arthritis [FA20] [34]
Anthrax vaccine DM9GSWY Moderate Antagonize the effect of Decitabine when combined with Anthrax vaccine. Sepsis [1G40-1G41] [35]
Valganciclovir DMS2IUH Moderate Additive myelosuppressive effects by the combination of Decitabine and Valganciclovir. Virus infection [1A24-1D9Z] [29]
⏷ Show the Full List of 14 DDI Information of This Drug

References

1 URL: http://www.guidetopharmacology.org Nucleic Acids Res. 2015 Oct 12. pii: gkv1037. The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands. (Ligand id: 6805).
2 2006 drug approvals: finding the niche. Nat Rev Drug Discov. 2007 Feb;6(2):99-101.
3 Drugs@FDA. U.S. Food and Drug Administration. U.S. Department of Health & Human Services. 2015
4 FDA Approved Drug Products: decitabine for injection
5 Trend Analysis of a Database of Intravenous Pharmacokinetic Parameters in Humans for 1352 Drug Compounds
6 Saba HI, Wijermans PW: Decitabine in myelodysplastic syndromes. Semin Hematol. 2005 Jul;42(3 Suppl 2):S23-31.
7 Jarema M, Dudek D, Landowski J, Heitzman J, Rabe-Jablonska J, Rybakowski J: [Trazodon--the antidepressant: mechanism of action and its position in the treatment of depression]. Psychiatr Pol. 2011 Jul-Aug;45(4):611-25.
8 Estimating the safe starting dose in phase I clinical trials and no observed effect level based on QSAR modeling of the human maximum recommended daily dose
9 Tracking decitabine incorporation into malignant myeloid cell DNA in vitro and in vivo by LC-MS/MS with enzymatic digestion. Sci Rep. 2019 Mar 14;9(1):4558.
10 Mycoplasma hyorhinis-encoded cytidine deaminase efficiently inactivates cytosine-based anticancer drugs. FEBS Open Bio. 2015 Aug 3;5:634-9.
11 Genetic factors influencing cytarabine therapy. Pharmacogenomics. 2009 Oct;10(10):1657-74.
12 Equilibrative nucleoside transporter 1 genotype, cytidine deaminase activity and age predict gemcitabine plasma clearance in patients with solid tumours. Br J Clin Pharmacol. 2011 Mar;71(3):437-44.
13 Augmentation of the antitumor activity of capecitabine by a tumor selective dihydropyrimidine dehydrogenase inhibitor, RO0094889. Int J Cancer. 2003 Sep 20;106(5):799-805.
14 A pilot pharmacokinetic study of oral azacitidine. Leukemia. 2008 Sep;22(9):1680-4.
15 Cisplatin and DNA repair in cancer chemotherapy.Trends Biochem Sci.1995 Oct;20(10):435-9.
16 Structures of oxaliplatin-oligonucleotide adducts from DNA.J Mass Spectrom.2012 Oct;47(10):1282-93.
17 31P NMR spectra of ethidium, quinacrine, and daunomycin complexes with poly(adenylic acid).poly(uridylic acid) RNA duplex and calf thymus DNA. Biochemistry. 1989 Apr 4;28(7):2804-12.
18 Pharmacokinetics and metabolism of ifosfamide in relation to DNA damage assessed by the COMET assay in children with cancer. Br J Cancer. 2005 May 9;92(9):1626-35.
19 O6-methylguanine-DNA methyltransferase activity and sensitivity to cyclophosphamide and cisplatin in human lung tumor xenografts. Int J Cancer. 1998 Sep 11;77(6):919-22.
20 Inhibition of carboplatin-induced DNA interstrand cross-link repair by gemcitabine in patients receiving these drugs for platinum-resistant ovarian cancer.Clin Cancer Res.2010 Oct 1;16(19):4899-905.
21 DNA intrastrand cross-link at the 5'-GA-3' sequence formed by busulfan and its role in the cytotoxic effect. Cancer Sci. 2004 May;95(5):454-8.
22 Brca2/Xrcc2 dependent HR, but not NHEJ, is required for protection against O(6)-methylguanine triggered apoptosis, DSBs and chromosomal aberrations... DNA Repair (Amst). 2009 Jan 1;8(1):72-86.
23 Structural studies of atom-specific anticancer drugs acting on DNA. Pharmacol Ther. 1999 Sep;83(3):181-215.
24 Predicting the myelotoxicity of chemotherapy: the use of pretreatment O6-methylguanine-DNA methyltransferase determination in peripheral blood mono... Melanoma Res. 2011 Dec;21(6):502-8.
25 Cerner Multum, Inc. "UK Summary of Product Characteristics.".
26 Product Information. Arava (leflunomide). Hoechst Marion-Roussel Inc, Kansas City, MO.
27 Product Information. Prolia (denosumab). Amgen USA, Thousand Oaks, CA.
28 Product Information. Vumerity (diroximel fumarate). Alkermes, Inc, Cambridge, MA.
29 Cerner Multum, Inc. "Australian Product Information.".
30 Product Information. Gilenya (fingolimod). Novartis Pharmaceuticals, East Hanover, NJ.
31 Product Information. Ocrevus (ocrelizumab). Genentech, South San Francisco, CA.
32 Product Information. Synribo (omacetaxine). Teva Pharmaceuticals USA, North Wales, PA.
33 Product Information. Arcalyst (rilonacept). Regeneron Pharmaceuticals Inc, Tarrytown, NY.
34 Product Information. Cimzia (certolizumab). UCB Pharma Inc, Smyrna, GA.
35 CDC. Centers for Disease Control and Prevention/ "Recommendations of the advisory committtee on immunization practices (ACIP): use of vaccines and immune globulins in persons with altered immunocompetence." MMWR Morb Mortal Wkly Rep 42(RR-04) (1993): 1-18. [PMID: 20300058]