General Information of Drug Off-Target (DOT) (ID: OTWZH98J)

DOT Name Pigment epithelium-derived factor (SERPINF1)
Synonyms PEDF; Cell proliferation-inducing gene 35 protein; EPC-1; Serpin F1
Gene Name SERPINF1
Related Disease
Osteogenesis imperfecta type 6 ( )
Osteogenesis imperfecta type 3 ( )
Osteogenesis imperfecta type 4 ( )
UniProt ID
PEDF_HUMAN
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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PDB ID
1IMV
Pfam ID
PF00079
Sequence
MQALVLLLCIGALLGHSSCQNPASPPEEGSPDPDSTGALVEEEDPFFKVPVNKLAAAVSN
FGYDLYRVRSSTSPTTNVLLSPLSVATALSALSLGAEQRTESIIHRALYYDLISSPDIHG
TYKELLDTVTAPQKNLKSASRIVFEKKLRIKSSFVAPLEKSYGTRPRVLTGNPRLDLQEI
NNWVQAQMKGKLARSTKEIPDEISILLLGVAHFKGQWVTKFDSRKTSLEDFYLDEERTVR
VPMMSDPKAVLRYGLDSDLSCKIAQLPLTGSMSIIFFLPLKVTQNLTLIEESLTSEFIHD
IDRELKTVQAVLTVPKLKLSYEGEVTKSLQEMKLQSLFDSPDFSKITGKPIKLTQVEHRA
GFEWNEDGAGTTPSPGLQPAHLTFPLDYHLNQPFIFVLRDTDTGALLFIGKILDPRGP
Function
Neurotrophic protein; induces extensive neuronal differentiation in retinoblastoma cells. Potent inhibitor of angiogenesis. As it does not undergo the S (stressed) to R (relaxed) conformational transition characteristic of active serpins, it exhibits no serine protease inhibitory activity.
Tissue Specificity Retinal pigment epithelial cells and blood plasma.
KEGG Pathway
Wnt sig.ling pathway (hsa04310 )

Molecular Interaction Atlas (MIA) of This DOT

3 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Osteogenesis imperfecta type 6 DIS0ZNUU Strong Autosomal recessive [1]
Osteogenesis imperfecta type 3 DISFJVSJ Supportive Autosomal dominant [2]
Osteogenesis imperfecta type 4 DIS8S46L Supportive Autosomal dominant [3]
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Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
28 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the expression of Pigment epithelium-derived factor (SERPINF1). [4]
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of Pigment epithelium-derived factor (SERPINF1). [5]
Tretinoin DM49DUI Approved Tretinoin decreases the expression of Pigment epithelium-derived factor (SERPINF1). [6]
Acetaminophen DMUIE76 Approved Acetaminophen decreases the expression of Pigment epithelium-derived factor (SERPINF1). [7]
Doxorubicin DMVP5YE Approved Doxorubicin decreases the expression of Pigment epithelium-derived factor (SERPINF1). [8]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of Pigment epithelium-derived factor (SERPINF1). [9]
Cisplatin DMRHGI9 Approved Cisplatin increases the expression of Pigment epithelium-derived factor (SERPINF1). [10]
Arsenic DMTL2Y1 Approved Arsenic increases the expression of Pigment epithelium-derived factor (SERPINF1). [11]
Quercetin DM3NC4M Approved Quercetin decreases the expression of Pigment epithelium-derived factor (SERPINF1). [12]
Calcitriol DM8ZVJ7 Approved Calcitriol decreases the expression of Pigment epithelium-derived factor (SERPINF1). [13]
Vorinostat DMWMPD4 Approved Vorinostat decreases the expression of Pigment epithelium-derived factor (SERPINF1). [14]
Selenium DM25CGV Approved Selenium increases the expression of Pigment epithelium-derived factor (SERPINF1). [15]
Progesterone DMUY35B Approved Progesterone increases the expression of Pigment epithelium-derived factor (SERPINF1). [16]
Panobinostat DM58WKG Approved Panobinostat decreases the expression of Pigment epithelium-derived factor (SERPINF1). [17]
Troglitazone DM3VFPD Approved Troglitazone decreases the expression of Pigment epithelium-derived factor (SERPINF1). [18]
Rosiglitazone DMILWZR Approved Rosiglitazone decreases the expression of Pigment epithelium-derived factor (SERPINF1). [18]
Paclitaxel DMLB81S Approved Paclitaxel increases the expression of Pigment epithelium-derived factor (SERPINF1). [19]
Nicotine DMWX5CO Approved Nicotine decreases the expression of Pigment epithelium-derived factor (SERPINF1). [20]
Mifepristone DMGZQEF Approved Mifepristone decreases the expression of Pigment epithelium-derived factor (SERPINF1). [21]
Propofol DMB4OLE Approved Propofol increases the expression of Pigment epithelium-derived factor (SERPINF1). [22]
Sevoflurane DMC9O43 Approved Sevoflurane decreases the expression of Pigment epithelium-derived factor (SERPINF1). [22]
Tocopherol DMBIJZ6 Phase 2 Tocopherol increases the expression of Pigment epithelium-derived factor (SERPINF1). [15]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene decreases the expression of Pigment epithelium-derived factor (SERPINF1). [24]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 decreases the expression of Pigment epithelium-derived factor (SERPINF1). [25]
THAPSIGARGIN DMDMQIE Preclinical THAPSIGARGIN increases the expression of Pigment epithelium-derived factor (SERPINF1). [26]
Bisphenol A DM2ZLD7 Investigative Bisphenol A increases the expression of Pigment epithelium-derived factor (SERPINF1). [27]
Trichostatin A DM9C8NX Investigative Trichostatin A decreases the expression of Pigment epithelium-derived factor (SERPINF1). [28]
Milchsaure DM462BT Investigative Milchsaure affects the expression of Pigment epithelium-derived factor (SERPINF1). [29]
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⏷ Show the Full List of 28 Drug(s)
2 Drug(s) Affected the Protein Interaction/Cellular Processes of This DOT
Drug Name Drug ID Highest Status Interaction REF
Resveratrol DM3RWXL Phase 3 Resveratrol affects the secretion of Pigment epithelium-derived factor (SERPINF1). [23]
D-glucose DMMG2TO Investigative D-glucose decreases the secretion of Pigment epithelium-derived factor (SERPINF1). [23]
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References

1 The Gene Curation Coalition: A global effort to harmonize gene-disease evidence resources. Genet Med. 2022 Aug;24(8):1732-1742. doi: 10.1016/j.gim.2022.04.017. Epub 2022 May 4.
2 Exome sequencing identifies truncating mutations in human SERPINF1 in autosomal-recessive osteogenesis imperfecta. Am J Hum Genet. 2011 Mar 11;88(3):362-71. doi: 10.1016/j.ajhg.2011.01.015. Epub 2011 Feb 25.
3 What is new in genetics and osteogenesis imperfecta classification?. J Pediatr (Rio J). 2014 Nov-Dec;90(6):536-41. doi: 10.1016/j.jped.2014.05.003. Epub 2014 Jul 18.
4 The neuroprotective action of the mood stabilizing drugs lithium chloride and sodium valproate is mediated through the up-regulation of the homeodomain protein Six1. Toxicol Appl Pharmacol. 2009 Feb 15;235(1):124-34.
5 Comparison of HepG2 and HepaRG by whole-genome gene expression analysis for the purpose of chemical hazard identification. Toxicol Sci. 2010 May;115(1):66-79.
6 Phenotypic characterization of retinoic acid differentiated SH-SY5Y cells by transcriptional profiling. PLoS One. 2013 May 28;8(5):e63862.
7 Multiple microRNAs function as self-protective modules in acetaminophen-induced hepatotoxicity in humans. Arch Toxicol. 2018 Feb;92(2):845-858.
8 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
9 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
10 Activation of AIFM2 enhances apoptosis of human lung cancer cells undergoing toxicological stress. Toxicol Lett. 2016 Sep 6;258:227-236.
11 Role of pigment epithelium-derived factor (PEDF) on arsenic-induced neuronal apoptosis. Chemosphere. 2019 Jan;215:925-931. doi: 10.1016/j.chemosphere.2018.10.100. Epub 2018 Oct 16.
12 Comparison of phenotypic and transcriptomic effects of false-positive genotoxins, true genotoxins and non-genotoxins using HepG2 cells. Mutagenesis. 2011 Sep;26(5):593-604.
13 Identification of vitamin D3 target genes in human breast cancer tissue. J Steroid Biochem Mol Biol. 2016 Nov;164:90-97.
14 Gene microarray analysis of human renal cell carcinoma: the effects of HDAC inhibition and retinoid treatment. Cancer Biol Ther. 2008 Oct;7(10):1607-18.
15 Selenium and vitamin E: cell type- and intervention-specific tissue effects in prostate cancer. J Natl Cancer Inst. 2009 Mar 4;101(5):306-20.
16 Effects of progesterone treatment on expression of genes involved in uterine quiescence. Reprod Sci. 2011 Aug;18(8):781-97.
17 A transcriptome-based classifier to identify developmental toxicants by stem cell testing: design, validation and optimization for histone deacetylase inhibitors. Arch Toxicol. 2015 Sep;89(9):1599-618.
18 Transcriptomic analysis of untreated and drug-treated differentiated HepaRG cells over a 2-week period. Toxicol In Vitro. 2015 Dec 25;30(1 Pt A):27-35.
19 Identification of selective inhibitors of cancer stem cells by high-throughput screening. Cell. 2009 Aug 21;138(4):645-659. doi: 10.1016/j.cell.2009.06.034. Epub 2009 Aug 13.
20 Nornicotine and Nicotine Induced Neovascularization via Increased VEGF/PEDF Ratio. Ophthalmic Res. 2015;55(1):1-9. doi: 10.1159/000440847. Epub 2015 Nov 5.
21 Mifepristone induced progesterone withdrawal reveals novel regulatory pathways in human endometrium. Mol Hum Reprod. 2007 Sep;13(9):641-54.
22 Sevoflurane but not propofol enhances ovarian cancer cell biology through regulating cellular metabolic and signaling mechanisms. Cell Biol Toxicol. 2023 Aug;39(4):1395-1411. doi: 10.1007/s10565-022-09766-6. Epub 2022 Oct 8.
23 Calorie restriction-induced changes in the secretome of human adipocytes, comparison with resveratrol-induced secretome effects. Biochim Biophys Acta. 2014 Sep;1844(9):1511-22. doi: 10.1016/j.bbapap.2014.04.023. Epub 2014 May 5.
24 Identification of a transcriptomic signature of food-relevant genotoxins in human HepaRG hepatocarcinoma cells. Food Chem Toxicol. 2020 Jun;140:111297. doi: 10.1016/j.fct.2020.111297. Epub 2020 Mar 28.
25 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
26 Endoplasmic reticulum stress impairs insulin signaling through mitochondrial damage in SH-SY5Y cells. Neurosignals. 2012;20(4):265-80.
27 Bisphenol A induces DSB-ATM-p53 signaling leading to cell cycle arrest, senescence, autophagy, stress response, and estrogen release in human fetal lung fibroblasts. Arch Toxicol. 2018 Apr;92(4):1453-1469.
28 From transient transcriptome responses to disturbed neurodevelopment: role of histone acetylation and methylation as epigenetic switch between reversible and irreversible drug effects. Arch Toxicol. 2014 Jul;88(7):1451-68.
29 Transcriptional profiling of lactic acid treated reconstructed human epidermis reveals pathways underlying stinging and itch. Toxicol In Vitro. 2019 Jun;57:164-173.