General Information of Drug Off-Target (DOT) (ID: OTFGRGFR)

DOT Name Coiled-coil and C2 domain-containing protein 2A (CC2D2A)
Gene Name CC2D2A
Related Disease
Ciliopathy ( )
Joubert syndrome 9 ( )
Achromatopsia ( )
Gastrointestinal stromal tumour ( )
Hydrocephalus ( )
Intellectual disability ( )
Meckel syndrome, type 1 ( )
Polydactyly ( )
Retinitis pigmentosa ( )
Retinitis pigmentosa 93 ( )
Nephronophthisis ( )
Joubert syndrome with oculorenal defect ( )
Meckel syndrome ( )
Obsolete COACH syndrome 1 ( )
Acute myelogenous leukaemia ( )
COACH syndrome ( )
Johanson-Blizzard syndrome ( )
Joubert syndrome ( )
UniProt ID
C2D2A_HUMAN
3D Structure
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2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
Pfam ID
PF15625 ; PF17661
Sequence
MNPREEKVKIITEEFIENDEDADMGRQNKNSKVRRQPRKKQPPTAVPKEMVSEKSHLGNP
QEPVQEEPKTRLLSMTVRRGPRSLPPIPSTSRTGFAEFSMRGRMREKLQAARSKAESALL
QEIPTPRPRRLRSPSKKELETEFGTEPGKEVERTQQEVDSQSYSRVKFHDSARKIKPKPQ
VPPGFPSAEEAYNFFTFNFDPEPEGSEEKPKARHRAGTNQEEEEGEEEEPPAQGGGKEMD
EEELLNGDDAEDFLLGLDHVADDFVAVRPADYESIHDRLQMEREMLFIPSRQTVPTYKKL
PENVQPRFLEDEGLYTGVRPEVARTNQNIMENRLLMQDPERRWFGDDGRILALPNPIKPF
PSRPPVLTQEQSIKAELETLYKKAVKYVHSSQHVIRSGDPPGNFQLDIDISGLIFTHHPC
FSREHVLAAKLAQLYDQYLARHQRNKAKFLTDKLQALRNAVQTGLDPEKPHQSLDTIQKT
INEYKSEIRQTRKFRDAEQEKDRTLLKTIIKVWKEMKSLREFQRFTNTPLKLVLRKEKAD
QKADEEAYEAEIQAEISELLEEHTEEYAQKMEEYRTSLQQWKAWRKVQRAKKKKRKQAAE
EHPGDEIAEPYPEEDLVKPSPPEPTDRAVIEQEVRERAAQSRRRPWEPTLVPELSLAGSV
TPNDQCPRAEVSRREDVKKRSVYLKVLFNNKEVSRTVSRPLGADFRVHFGQIFNLQIVNW
PESLTLQVYETVGHSSPTLLAEVFLPIPETTVVTGRAPTEEVEFSSNQHVTLDHEGVGSG
VPFSFEADGSNQLTLMTSGKVSHSVAWAIGENGIPLIPPLSQQNIGFRSALKKADAISSI
GTSGLTDMKKLAKWAAESKLDPNDPNNAPLMQLISVATSGESYVPDFFRLEQLQQEFNFV
SDQELNRSKRFRLLHLRSQEVPEFRNYKQVPVYDREIMEKVFQDYEKRLRDRNVIETKEH
IDTHRAIVAKYLQQVRESVINRFLIAKQYFLLADMIVEEEVPNISILGLSLFKLAEQKRP
LRPRRKGRKKVTAQNLSDGDIKLLVNIVRAYDIPVRKPAVSKFQQPSRSSRMFSEKHAAS
PSTYSPTHNADYPLGQVLVRPFVEVSFQRTVCHTTTAEGPNPSWNEELELPFRAPNGDYS
TASLQSVKDVVFINIFDEVLHDVLEDDRERGSGIHTRIERHWLGCVKMPFSTIYFQARID
GTFKIDIPPVLLGYSKERNMILERGFDSVRSLSEGSYITLFITIEPQLVPGESIREKFES
QEDEKLLQATEKFQAECALKFPNRQCLTTVIDISGKTVFITRYLKPLNPPQELLNVYPNN
LQATAELVARYVSLIPFLPDTVSFGGICDLWSTSDQFLDLLAGDEEEHAVLLCNYFLSLG
KKAWLLMGNAIPEGPTAYVLTWEQGRYLIWNPCSGHFYGQFDTFCPLKNVGCLIGPDNIW
FNIQRYESPLRINFDVTRPKLWKSFFSRSLPYPGLSSVQPEELIYQRSDKAAAAELQDRI
EKILKEKIMDWRPRHLTRWNRYCTSTLRHFLPLLEKSQGEDVEDDHRAELLKQLGDYRFS
GFPLHMPYSEVKPLIDAVYSTGVHNIDVPNVEFALAVYIHPYPKNVLSVWIYVASLIRNR
Function
Component of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes. Required for ciliogenesis and sonic hedgehog/SHH signaling.
Tissue Specificity
Strongly expressed in prostate, pancreas, kidney, lung, liver, retina, kidney, fetal brain and fetal kidney. Lower expression in spleen, small intestine, colon, skeletal muscle, ovary, thymus and heart.
Reactome Pathway
Anchoring of the basal body to the plasma membrane (R-HSA-5620912 )

Molecular Interaction Atlas (MIA) of This DOT

18 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Ciliopathy DIS10G4I Definitive Autosomal recessive [1]
Joubert syndrome 9 DISUVR4V Definitive Autosomal recessive [2]
Achromatopsia DISKL51I Strong Genetic Variation [3]
Gastrointestinal stromal tumour DIS6TJYS Strong Biomarker [4]
Hydrocephalus DISIZUF7 Strong Biomarker [5]
Intellectual disability DISMBNXP Strong Biomarker [6]
Meckel syndrome, type 1 DIS4YWZU Strong Biomarker [7]
Polydactyly DIS25BMZ Strong Biomarker [8]
Retinitis pigmentosa DISCGPY8 Strong Genetic Variation [9]
Retinitis pigmentosa 93 DISLYJ3H Strong Autosomal recessive [10]
Nephronophthisis DISXU4HY moderate Altered Expression [11]
Joubert syndrome with oculorenal defect DISU0IPO Supportive Autosomal recessive [12]
Meckel syndrome DISXPHOY Supportive Autosomal recessive [13]
Obsolete COACH syndrome 1 DISM57KK Supportive Autosomal recessive [14]
Acute myelogenous leukaemia DISCSPTN Limited Genetic Variation [15]
COACH syndrome DISVDRSD Limited Biomarker [16]
Johanson-Blizzard syndrome DISYNPE8 Limited Genetic Variation [17]
Joubert syndrome DIS7P5CO Limited Genetic Variation [16]
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⏷ Show the Full List of 18 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
14 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [18]
Tretinoin DM49DUI Approved Tretinoin decreases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [19]
Temozolomide DMKECZD Approved Temozolomide decreases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [21]
Vorinostat DMWMPD4 Approved Vorinostat decreases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [22]
Zoledronate DMIXC7G Approved Zoledronate decreases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [23]
Panobinostat DM58WKG Approved Panobinostat affects the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [24]
Demecolcine DMCZQGK Approved Demecolcine increases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [25]
Melphalan DMOLNHF Approved Melphalan decreases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [26]
Urethane DM7NSI0 Phase 4 Urethane decreases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [27]
(+)-JQ1 DM1CZSJ Phase 1 (+)-JQ1 decreases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [29]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 decreases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [30]
Bisphenol A DM2ZLD7 Investigative Bisphenol A increases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [31]
Formaldehyde DM7Q6M0 Investigative Formaldehyde increases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [25]
Milchsaure DM462BT Investigative Milchsaure increases the expression of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [32]
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⏷ Show the Full List of 14 Drug(s)
2 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Arsenic DMTL2Y1 Approved Arsenic affects the methylation of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [20]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene increases the methylation of Coiled-coil and C2 domain-containing protein 2A (CC2D2A). [28]
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References

1 Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020 Feb;22(2):245-257. doi: 10.1038/s41436-019-0686-8. Epub 2019 Nov 6.
2 COACH syndrome: report of two brothers with congenital hepatic fibrosis, cerebellar vermis hypoplasia, oligophrenia, ataxia, and mental retardation. Am J Med Genet. 1996 Aug 23;64(3):514-20. doi: 10.1002/(SICI)1096-8628(19960823)64:3<514::AID-AJMG13>3.0.CO;2-O.
3 Whole exome sequencing resolves complex phenotype and identifies CC2D2A mutations underlying non-syndromic rod-cone dystrophy.Clin Genet. 2019 Feb;95(2):329-333. doi: 10.1111/cge.13453. Epub 2018 Nov 4.
4 Hedgehog pathway dysregulation contributes to the pathogenesis of human gastrointestinal stromal tumors via GLI-mediated activation of KIT expression. Oncotarget. 2016 Nov 29;7(48):78226-78241. doi: 10.18632/oncotarget.12909.
5 Genotype-phenotype correlation in CC2D2A-related Joubert syndrome reveals an association with ventriculomegaly and seizures.J Med Genet. 2012 Feb;49(2):126-37. doi: 10.1136/jmedgenet-2011-100552.
6 Positive association of CC2D1A and CC2D2A gene haplotypes with mental retardation in a Han Chinese population.DNA Cell Biol. 2012 Jan;31(1):80-7. doi: 10.1089/dna.2011.1253. Epub 2011 Oct 24.
7 Mks6 mutations reveal tissue- and cell type-specific roles for the cilia transition zone.FASEB J. 2019 Jan;33(1):1440-1455. doi: 10.1096/fj.201801149R. Epub 2018 Aug 22.
8 Founder mutations and genotype-phenotype correlations in Meckel-Gruber syndrome and associated ciliopathies.Cilia. 2012 Oct 1;1(1):18. doi: 10.1186/2046-2530-1-18.
9 CC2D2A, encoding a coiled-coil and C2 domain protein, causes autosomal-recessive mental retardation with retinitis pigmentosa.Am J Hum Genet. 2008 Apr;82(4):1011-8. doi: 10.1016/j.ajhg.2008.01.021.
10 Effect of alpha-tocopherol supplementation on blood pressure and lipidic profile in streptozotocin-induced diabetes mellitus in spontaneously hypertensive rats. Clin Chim Acta. 2005 Jan;351(1-2):101-4. doi: 10.1016/j.cccn.2004.08.007.
11 Genotype-phenotype correlation in 440 patients with NPHP-related ciliopathies.Kidney Int. 2011 Dec;80(11):1239-45. doi: 10.1038/ki.2011.284. Epub 2011 Aug 24.
12 Joubert Syndrome. 2003 Jul 9 [updated 2017 Jun 29]. In: Adam MP, Feldman J, Mirzaa GM, Pagon RA, Wallace SE, Bean LJH, Gripp KW, Amemiya A, editors. GeneReviews(?) [Internet]. Seattle (WA): University of Washington, Seattle; 1993C2024.
13 Molecular genetics and pathogenic mechanisms for the severe ciliopathies: insights into neurodevelopment and pathogenesis of neural tube defects. Mol Neurobiol. 2011 Feb;43(1):12-26. doi: 10.1007/s12035-010-8154-0. Epub 2010 Nov 27.
14 Mutations in 3 genes (MKS3, CC2D2A and RPGRIP1L) cause COACH syndrome (Joubert syndrome with congenital hepatic fibrosis). J Med Genet. 2010 Jan;47(1):8-21. doi: 10.1136/jmg.2009.067249. Epub 2009 Jul 1.
15 Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia.Oncotarget. 2017 Jan 31;8(5):7891-7899. doi: 10.18632/oncotarget.13631.
16 Novel CC2D2A compound heterozygous mutations cause Joubert syndrome.Mol Med Rep. 2017 Jan;15(1):305-308. doi: 10.3892/mmr.2016.6007. Epub 2016 Dec 7.
17 CC2D2A mutations in Meckel and Joubert syndromes indicate a genotype-phenotype correlation.Hum Mutat. 2009 Nov;30(11):1574-82. doi: 10.1002/humu.21116.
18 Human embryonic stem cell-derived test systems for developmental neurotoxicity: a transcriptomics approach. Arch Toxicol. 2013 Jan;87(1):123-43.
19 Phenotypic characterization of retinoic acid differentiated SH-SY5Y cells by transcriptional profiling. PLoS One. 2013 May 28;8(5):e63862.
20 Prenatal arsenic exposure and the epigenome: identifying sites of 5-methylcytosine alterations that predict functional changes in gene expression in newborn cord blood and subsequent birth outcomes. Toxicol Sci. 2015 Jan;143(1):97-106. doi: 10.1093/toxsci/kfu210. Epub 2014 Oct 10.
21 Temozolomide induces activation of Wnt/-catenin signaling in glioma cells via PI3K/Akt pathway: implications in glioma therapy. Cell Biol Toxicol. 2020 Jun;36(3):273-278. doi: 10.1007/s10565-019-09502-7. Epub 2019 Nov 22.
22 Definition of transcriptome-based indices for quantitative characterization of chemically disturbed stem cell development: introduction of the STOP-Toxukn and STOP-Toxukk tests. Arch Toxicol. 2017 Feb;91(2):839-864.
23 Interleukin-19 as a translational indicator of renal injury. Arch Toxicol. 2015 Jan;89(1):101-6.
24 The Bromodomain Inhibitor JQ1 and the Histone Deacetylase Inhibitor Panobinostat Synergistically Reduce N-Myc Expression and Induce Anticancer Effects. Clin Cancer Res. 2016 May 15;22(10):2534-44. doi: 10.1158/1078-0432.CCR-15-1666. Epub 2016 Jan 5.
25 Characterization of formaldehyde's genotoxic mode of action by gene expression analysis in TK6 cells. Arch Toxicol. 2013 Nov;87(11):1999-2012.
26 Bone marrow osteoblast damage by chemotherapeutic agents. PLoS One. 2012;7(2):e30758. doi: 10.1371/journal.pone.0030758. Epub 2012 Feb 17.
27 Ethyl carbamate induces cell death through its effects on multiple metabolic pathways. Chem Biol Interact. 2017 Nov 1;277:21-32.
28 Air pollution and DNA methylation alterations in lung cancer: A systematic and comparative study. Oncotarget. 2017 Jan 3;8(1):1369-1391. doi: 10.18632/oncotarget.13622.
29 Targeting MYCN in neuroblastoma by BET bromodomain inhibition. Cancer Discov. 2013 Mar;3(3):308-23.
30 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
31 Bisphenol A induces DSB-ATM-p53 signaling leading to cell cycle arrest, senescence, autophagy, stress response, and estrogen release in human fetal lung fibroblasts. Arch Toxicol. 2018 Apr;92(4):1453-1469.
32 Transcriptional profiling of lactic acid treated reconstructed human epidermis reveals pathways underlying stinging and itch. Toxicol In Vitro. 2019 Jun;57:164-173.