General Information of Drug Off-Target (DOT) (ID: OTBPMIMW)

DOT Name Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Synonyms GAPDH; EC 1.2.1.12; Peptidyl-cysteine S-nitrosylase GAPDH; EC 2.6.99.-
Gene Name GAPDH
UniProt ID
G3P_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
PDB ID
1U8F; 1ZNQ; 3GPD; 4WNC; 4WNI; 6ADE; 6IQ6; 6M61; 6YND; 6YNE; 6YNF; 6YNH; 8DNS; 8P5F
EC Number
1.2.1.12; 2.6.99.-
Pfam ID
PF02800 ; PF00044
Sequence
MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTV
KAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVI
ISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHA
ITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANV
SVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAG
IALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE
Function
Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Facilitates the CHP1-dependent microtubule and membrane associations through its ability to stimulate the binding of CHP1 to microtubules. Component of the GAIT (gamma interferon-activated inhibitor of translation) complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. Upon interferon-gamma treatment assembles into the GAIT complex which binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs (such as ceruplasmin) and suppresses their translation. Also plays a role in innate immunity by promoting TNF-induced NF-kappa-B activation and type I interferon production, via interaction with TRAF2 and TRAF3, respectively. Participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. Nuclear functions are probably due to the nitrosylase activity that mediates cysteine S-nitrosylation of nuclear target proteins such as SIRT1, HDAC2 and PRKDC.
KEGG Pathway
Glycolysis / Gluconeogenesis (hsa00010 )
Metabolic pathways (hsa01100 )
Carbon metabolism (hsa01200 )
Biosynthesis of amino acids (hsa01230 )
HIF-1 sig.ling pathway (hsa04066 )
Alzheimer disease (hsa05010 )
Pathogenic Escherichia coli infection (hsa05130 )
Salmonella infection (hsa05132 )
Diabetic cardiomyopathy (hsa05415 )
Reactome Pathway
Gluconeogenesis (R-HSA-70263 )
Glycolysis (R-HSA-70171 )
BioCyc Pathway
MetaCyc:HS03433-MONOMER

Molecular Interaction Atlas (MIA) of This DOT

Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
This DOT Affected the Drug Response of 1 Drug(s)
Drug Name Drug ID Highest Status Interaction REF
Ethanol DMDRQZU Approved Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) increases the Liver injury ADR of Ethanol. [35]
------------------------------------------------------------------------------------
32 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Tretinoin DM49DUI Approved Tretinoin decreases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [1]
Doxorubicin DMVP5YE Approved Doxorubicin increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [2]
Cisplatin DMRHGI9 Approved Cisplatin decreases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [3]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [4]
Quercetin DM3NC4M Approved Quercetin increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [5]
Hydrogen peroxide DM1NG5W Approved Hydrogen peroxide decreases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [6]
Decitabine DMQL8XJ Approved Decitabine increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [7]
Marinol DM70IK5 Approved Marinol increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [8]
Selenium DM25CGV Approved Selenium increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [9]
Fluorouracil DMUM7HZ Approved Fluorouracil affects the splicing of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [10]
Rosiglitazone DMILWZR Approved Rosiglitazone affects the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [11]
Cytarabine DMZD5QR Approved Cytarabine decreases the activity of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [12]
Clozapine DMFC71L Approved Clozapine increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [13]
Menthol DMG2KW7 Approved Menthol increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [14]
Obeticholic acid DM3Q1SM Approved Obeticholic acid decreases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [15]
Capsaicin DMGMF6V Approved Capsaicin increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [16]
Alitretinoin DMME8LH Approved Alitretinoin decreases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [1]
Dactinomycin DM2YGNW Approved Dactinomycin increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [18]
Dopamine DMPGUCF Approved Dopamine increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [19]
Mebendazole DMO14SG Approved Mebendazole decreases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [20]
Tocopherol DMBIJZ6 Phase 2 Tocopherol increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [9]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [21]
(+)-JQ1 DM1CZSJ Phase 1 (+)-JQ1 decreases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [22]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [24]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [26]
Trichostatin A DM9C8NX Investigative Trichostatin A decreases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [27]
chloropicrin DMSGBQA Investigative chloropicrin increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [28]
Nickel chloride DMI12Y8 Investigative Nickel chloride increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [29]
D-glucose DMMG2TO Investigative D-glucose increases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [30]
Okadaic acid DM47CO1 Investigative Okadaic acid affects the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [31]
Tributylstannanyl DMHN7CB Investigative Tributylstannanyl decreases the expression of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [32]
1,2-NAPHTHOQUINONE DMYXELH Investigative 1,2-NAPHTHOQUINONE decreases the activity of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [34]
------------------------------------------------------------------------------------
⏷ Show the Full List of 32 Drug(s)
3 Drug(s) Affected the Protein Interaction/Cellular Processes of This DOT
Drug Name Drug ID Highest Status Interaction REF
Dihydroartemisinin DMBXVMZ Approved Dihydroartemisinin affects the binding of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [17]
Mercaptopurine DMTM2IK Approved Mercaptopurine affects the localization of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [12]
Syringic Acid DM802V7 Investigative Syringic Acid increases the secretion of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [33]
------------------------------------------------------------------------------------
3 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
TAK-243 DM4GKV2 Phase 1 TAK-243 increases the sumoylation of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [23]
PMID28870136-Compound-52 DMFDERP Patented PMID28870136-Compound-52 decreases the phosphorylation of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [25]
Coumarin DM0N8ZM Investigative Coumarin affects the phosphorylation of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH). [25]
------------------------------------------------------------------------------------

References

1 Consequences of the natural retinoid/retinoid X receptor ligands action in human breast cancer MDA-MB-231 cell line: Focus on functional proteomics. Toxicol Lett. 2017 Nov 5;281:26-34. doi: 10.1016/j.toxlet.2017.09.001. Epub 2017 Sep 5.
2 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
3 Hypoxia-Induced Cisplatin Resistance in Non-Small Cell Lung Cancer Cells Is Mediated by HIF-1 and Mutant p53 and Can Be Overcome by Induction of Oxidative Stress. Cancers (Basel). 2018 Apr 21;10(4):126. doi: 10.3390/cancers10040126.
4 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
5 Quantitative proteomic analysis of HepG2 cells treated with quercetin suggests IQGAP1 involved in quercetin-induced regulation of cell proliferation and migration. OMICS. 2009 Apr;13(2):93-103. doi: 10.1089/omi.2008.0075.
6 Microarray analysis of H2O2-, HNE-, or tBH-treated ARPE-19 cells. Free Radic Biol Med. 2002 Nov 15;33(10):1419-32.
7 Gene induction and apoptosis in human hepatocellular carci-noma cells SMMC-7721 exposed to 5-aza-2'-deoxycytidine. Chin Med J (Engl). 2007 Sep 20;120(18):1626-31.
8 Genomic and proteomic analysis of the effects of cannabinoids on normal human astrocytes. Brain Res. 2008 Jan 29;1191:1-11.
9 Selenium and vitamin E: cell type- and intervention-specific tissue effects in prostate cancer. J Natl Cancer Inst. 2009 Mar 4;101(5):306-20.
10 Incorporation of 5-fluorouracil into U2 snRNA blocks pseudouridylation and pre-mRNA splicing in vivo. Nucleic Acids Res. 2007;35(2):550-8. doi: 10.1093/nar/gkl1084. Epub 2006 Dec 14.
11 Proteomic analysis of human adipose tissue after rosiglitazone treatment shows coordinated changes to promote glucose uptake. Obesity (Silver Spring). 2010 Jan;18(1):27-34. doi: 10.1038/oby.2009.208. Epub 2009 Jun 25.
12 Glyceraldehyde 3-phosphate dehydrogenase depletion induces cell cycle arrest and resistance to antimetabolites in human carcinoma cell lines. J Pharmacol Exp Ther. 2009 Oct;331(1):77-86. doi: 10.1124/jpet.109.155671. Epub 2009 Jul 23.
13 Cannabidiol Displays Proteomic Similarities to Antipsychotics in Cuprizone-Exposed Human Oligodendrocytic Cell Line MO3.13. Front Mol Neurosci. 2021 May 28;14:673144. doi: 10.3389/fnmol.2021.673144. eCollection 2021.
14 Repurposing L-menthol for systems medicine and cancer therapeutics? L-menthol induces apoptosis through caspase 10 and by suppressing HSP90. OMICS. 2016 Jan;20(1):53-64.
15 Pharmacotoxicology of clinically-relevant concentrations of obeticholic acid in an organotypic human hepatocyte system. Toxicol In Vitro. 2017 Mar;39:93-103.
16 A comparative proteomic analysis for capsaicin-induced apoptosis between human hepatocarcinoma (HepG2) and human neuroblastoma (SK-N-SH) cells. Proteomics. 2008 Nov;8(22):4748-67. doi: 10.1002/pmic.200800094.
17 Untargeted Proteomics and Systems-Based Mechanistic Investigation of Artesunate in Human Bronchial Epithelial Cells. Chem Res Toxicol. 2015 Oct 19;28(10):1903-13. doi: 10.1021/acs.chemrestox.5b00105. Epub 2015 Sep 21.
18 Response rate of fibrosarcoma cells to cytotoxic drugs on the expression level correlates to the therapeutic response rate of fibrosarcomas and is mediated by regulation of apoptotic pathways. BMC Cancer. 2005 Jul 7;5:74. doi: 10.1186/1471-2407-5-74.
19 Mitochondrial proteomics investigation of a cellular model of impaired dopamine homeostasis, an early step in Parkinson's disease pathogenesis. Mol Biosyst. 2014 Jun;10(6):1332-44.
20 Mebendazole targets essential proteins in glucose metabolism leading gastric cancer cells to death. Toxicol Appl Pharmacol. 2023 Sep 15;475:116630. doi: 10.1016/j.taap.2023.116630. Epub 2023 Jul 18.
21 Differential protein expression of peroxiredoxin I and II by benzo(a)pyrene and quercetin treatment in 22Rv1 and PrEC prostate cell lines. Toxicol Appl Pharmacol. 2007 Apr 15;220(2):197-210. doi: 10.1016/j.taap.2006.12.030. Epub 2007 Jan 9.
22 The BET bromodomain inhibitor JQ1 suppresses growth of pancreatic ductal adenocarcinoma in patient-derived xenograft models. Oncogene. 2016 Feb 18;35(7):833-45.
23 Inhibiting ubiquitination causes an accumulation of SUMOylated newly synthesized nuclear proteins at PML bodies. J Biol Chem. 2019 Oct 18;294(42):15218-15234. doi: 10.1074/jbc.RA119.009147. Epub 2019 Jul 8.
24 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
25 Quantitative phosphoproteomics reveal cellular responses from caffeine, coumarin and quercetin in treated HepG2 cells. Toxicol Appl Pharmacol. 2022 Aug 15;449:116110. doi: 10.1016/j.taap.2022.116110. Epub 2022 Jun 7.
26 Bisphenol A impaired cell adhesion by altering the expression of adhesion and cytoskeleton proteins on human podocytes. Sci Rep. 2020 Oct 6;10(1):16638. doi: 10.1038/s41598-020-73636-6.
27 Synergistic effect of trichostatin A and 5-aza-2'-deoxycytidine on growth inhibition of pancreatic endocrine tumour cell lines: a proteomic study. Proteomics. 2009 Apr;9(7):1952-66. doi: 10.1002/pmic.200701089.
28 Transcriptomic analysis of human primary bronchial epithelial cells after chloropicrin treatment. Chem Res Toxicol. 2015 Oct 19;28(10):1926-35.
29 Carcinogenic nickel induces genes involved with hypoxic stress. Cancer Res. 2000 Jan 1;60(1):38-41.
30 Glucose-induced stimulation of human insulin-receptor mRNA and tyrosine kinase activity in cultured cells. Biochem J. 1995 Jan 1;305 ( Pt 1)(Pt 1):119-24. doi: 10.1042/bj3050119.
31 Alterations in metabolism-related genes induced in SHSY5Y cells by okadaic acid exposure. J Toxicol Environ Health A. 2012;75(13-15):844-56. doi: 10.1080/15287394.2012.690703.
32 Novel insights into the combined effect of triorganotin compounds and all-trans retinoic acid on expression of selected proteins associated with tumor progression in breast cancer cell line MDA-MB-231: Proteomic approach. Gen Physiol Biophys. 2019 Mar;38(2):135-144. doi: 10.4149/gpb_2018042. Epub 2019 Feb 26.
33 Octyl syringate is preferentially cytotoxic to cancer cells via lysosomal membrane permeabilization and autophagic flux inhibition. Cell Biol Toxicol. 2023 Feb;39(1):183-199. doi: 10.1007/s10565-021-09653-6. Epub 2021 Sep 15.
34 GSH-mediated S-transarylation of a quinone glyceraldehyde-3-phosphate dehydrogenase conjugate. Chem Res Toxicol. 2011 Nov 21;24(11):1836-44. doi: 10.1021/tx200025y. Epub 2011 Sep 1.
35 ADReCS-Target: target profiles for aiding drug safety research and application. Nucleic Acids Res. 2018 Jan 4;46(D1):D911-D917. doi: 10.1093/nar/gkx899.