General Information of Drug Off-Target (DOT) (ID: OTWALD2R)

DOT Name Replication factor C subunit 4 (RFC4)
Synonyms Activator 1 37 kDa subunit; A1 37 kDa subunit; Activator 1 subunit 4; Replication factor C 37 kDa subunit; RF-C 37 kDa subunit; RFC37
Gene Name RFC4
Related Disease
Adult glioblastoma ( )
B-cell neoplasm ( )
Breast neoplasm ( )
Cervical cancer ( )
Cervical carcinoma ( )
Glioblastoma multiforme ( )
Lung adenocarcinoma ( )
Lung squamous cell carcinoma ( )
Hepatocellular carcinoma ( )
Advanced cancer ( )
Colorectal carcinoma ( )
UniProt ID
RFC4_HUMAN
3D Structure
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2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
PDB ID
6VVO; 7Z6H
Pfam ID
PF00004 ; PF08542
Sequence
MQAFLKGTSISTKPPLTKDRGVAASAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSEGDLRK
AITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVFAACQSGSFDKLEAVVKDLIDEG
HAATQLVNQLHDVVVENNLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCATVMQQLS
QNC
Function
The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. This subunit may be involved in the elongation of the multiprimed DNA template.
KEGG Pathway
D. replication (hsa03030 )
Base excision repair (hsa03410 )
Nucleotide excision repair (hsa03420 )
Mismatch repair (hsa03430 )
Reactome Pathway
Recognition of DNA damage by PCNA-containing replication complex (R-HSA-110314 )
Translesion Synthesis by POLH (R-HSA-110320 )
Polymerase switching on the C-strand of the telomere (R-HSA-174411 )
Activation of ATR in response to replication stress (R-HSA-176187 )
PCNA-Dependent Long Patch Base Excision Repair (R-HSA-5651801 )
Translesion synthesis by POLK (R-HSA-5655862 )
Translesion synthesis by POLI (R-HSA-5656121 )
Termination of translesion DNA synthesis (R-HSA-5656169 )
HDR through Single Strand Annealing (SSA) (R-HSA-5685938 )
HDR through Homologous Recombination (HRR) (R-HSA-5685942 )
Processing of DNA double-strand break ends (R-HSA-5693607 )
Presynaptic phase of homologous DNA pairing and strand exchange (R-HSA-5693616 )
Gap-filling DNA repair synthesis and ligation in GG-NER (R-HSA-5696397 )
Dual Incision in GG-NER (R-HSA-5696400 )
Dual incision in TC-NER (R-HSA-6782135 )
Gap-filling DNA repair synthesis and ligation in TC-NER (R-HSA-6782210 )
Regulation of TP53 Activity through Phosphorylation (R-HSA-6804756 )
Polymerase switching (R-HSA-69091 )
G2/M DNA damage checkpoint (R-HSA-69473 )
Impaired BRCA2 binding to RAD51 (R-HSA-9709570 )
Translesion synthesis by REV1 (R-HSA-110312 )

Molecular Interaction Atlas (MIA) of This DOT

11 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Adult glioblastoma DISVP4LU Definitive Altered Expression [1]
B-cell neoplasm DISVY326 Strong Genetic Variation [2]
Breast neoplasm DISNGJLM Strong Biomarker [3]
Cervical cancer DISFSHPF Strong Biomarker [4]
Cervical carcinoma DIST4S00 Strong Biomarker [4]
Glioblastoma multiforme DISK8246 Strong Biomarker [5]
Lung adenocarcinoma DISD51WR Strong Altered Expression [6]
Lung squamous cell carcinoma DISXPIBD Strong Biomarker [7]
Hepatocellular carcinoma DIS0J828 moderate Biomarker [8]
Advanced cancer DISAT1Z9 Limited Altered Expression [9]
Colorectal carcinoma DIS5PYL0 Limited Biomarker [9]
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⏷ Show the Full List of 11 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
3 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the methylation of Replication factor C subunit 4 (RFC4). [10]
Decitabine DMQL8XJ Approved Decitabine affects the methylation of Replication factor C subunit 4 (RFC4). [18]
TAK-243 DM4GKV2 Phase 1 TAK-243 increases the sumoylation of Replication factor C subunit 4 (RFC4). [29]
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24 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of Replication factor C subunit 4 (RFC4). [11]
Tretinoin DM49DUI Approved Tretinoin decreases the expression of Replication factor C subunit 4 (RFC4). [12]
Acetaminophen DMUIE76 Approved Acetaminophen decreases the expression of Replication factor C subunit 4 (RFC4). [13]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate increases the expression of Replication factor C subunit 4 (RFC4). [14]
Estradiol DMUNTE3 Approved Estradiol decreases the expression of Replication factor C subunit 4 (RFC4). [15]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of Replication factor C subunit 4 (RFC4). [16]
Quercetin DM3NC4M Approved Quercetin increases the expression of Replication factor C subunit 4 (RFC4). [11]
Calcitriol DM8ZVJ7 Approved Calcitriol decreases the expression of Replication factor C subunit 4 (RFC4). [17]
Testosterone DM7HUNW Approved Testosterone decreases the expression of Replication factor C subunit 4 (RFC4). [17]
Phenobarbital DMXZOCG Approved Phenobarbital affects the expression of Replication factor C subunit 4 (RFC4). [19]
Menadione DMSJDTY Approved Menadione affects the expression of Replication factor C subunit 4 (RFC4). [20]
Cannabidiol DM0659E Approved Cannabidiol decreases the expression of Replication factor C subunit 4 (RFC4). [21]
Troglitazone DM3VFPD Approved Troglitazone decreases the expression of Replication factor C subunit 4 (RFC4). [22]
Dasatinib DMJV2EK Approved Dasatinib decreases the expression of Replication factor C subunit 4 (RFC4). [23]
Mitomycin DMH0ZJE Approved Mitomycin decreases the expression of Replication factor C subunit 4 (RFC4). [24]
Resveratrol DM3RWXL Phase 3 Resveratrol decreases the expression of Replication factor C subunit 4 (RFC4). [25]
phorbol 12-myristate 13-acetate DMJWD62 Phase 2 phorbol 12-myristate 13-acetate increases the expression of Replication factor C subunit 4 (RFC4). [26]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene decreases the expression of Replication factor C subunit 4 (RFC4). [27]
Leflunomide DMR8ONJ Phase 1 Trial Leflunomide decreases the expression of Replication factor C subunit 4 (RFC4). [28]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 decreases the expression of Replication factor C subunit 4 (RFC4). [30]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the expression of Replication factor C subunit 4 (RFC4). [31]
Coumestrol DM40TBU Investigative Coumestrol increases the expression of Replication factor C subunit 4 (RFC4). [32]
3R14S-OCHRATOXIN A DM2KEW6 Investigative 3R14S-OCHRATOXIN A decreases the expression of Replication factor C subunit 4 (RFC4). [33]
Glyphosate DM0AFY7 Investigative Glyphosate decreases the expression of Replication factor C subunit 4 (RFC4). [34]
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⏷ Show the Full List of 24 Drug(s)

References

1 Meta-analysis of oncogenic protein kinase Ciota signaling in lung adenocarcinoma.Clin Cancer Res. 2009 Mar 1;15(5):1527-33. doi: 10.1158/1078-0432.CCR-08-2459. Epub 2009 Feb 17.
2 miRNA?04 inhibits p53dependent vascular smooth muscle cell apoptosis and may prevent aneurysm formation.Mol Med Rep. 2017 Sep;16(3):2570-2578. doi: 10.3892/mmr.2017.6873. Epub 2017 Jun 28.
3 Understanding the functional impact of copy number alterations in breast cancer using a network modeling approach.Mol Biosyst. 2016 Mar;12(3):963-72. doi: 10.1039/c5mb00655d.
4 Systematic identification of key genes and pathways in the development of invasive cervical cancer.Gene. 2017 Jun 30;618:28-41. doi: 10.1016/j.gene.2017.03.018. Epub 2017 Mar 21.
5 Genome-wide expression profiling of glioblastoma using a large combined cohort.Sci Rep. 2018 Oct 10;8(1):15104. doi: 10.1038/s41598-018-33323-z.
6 Skp2 expression has different clinicopathological and prognostic implications in lung adenocarcinoma and squamous cell carcinoma.Oncol Lett. 2018 Sep;16(3):2873-2880. doi: 10.3892/ol.2018.9000. Epub 2018 Jun 20.
7 Screening and identification of key biomarkers in lung squamous cell carcinoma by bioinformatics analysis.Oncol Lett. 2019 Nov;18(5):5185-5196. doi: 10.3892/ol.2019.10873. Epub 2019 Sep 16.
8 CDK1, CCNB1, CDC20, BUB1, MAD2L1, MCM3, BUB1B, MCM2, and RFC4 May Be Potential Therapeutic Targets for Hepatocellular Carcinoma Using Integrated Bioinformatic Analysis.Biomed Res Int. 2019 Oct 13;2019:1245072. doi: 10.1155/2019/1245072. eCollection 2019.
9 Genome-wide RNAi Screening Identifies RFC4 as a Factor That Mediates Radioresistance in Colorectal Cancer by Facilitating Nonhomologous End Joining Repair.Clin Cancer Res. 2019 Jul 15;25(14):4567-4579. doi: 10.1158/1078-0432.CCR-18-3735. Epub 2019 Apr 12.
10 Integrative omics data analyses of repeated dose toxicity of valproic acid in vitro reveal new mechanisms of steatosis induction. Toxicology. 2018 Jan 15;393:160-170.
11 Comparison of phenotypic and transcriptomic effects of false-positive genotoxins, true genotoxins and non-genotoxins using HepG2 cells. Mutagenesis. 2011 Sep;26(5):593-604.
12 Transcriptional and Metabolic Dissection of ATRA-Induced Granulocytic Differentiation in NB4 Acute Promyelocytic Leukemia Cells. Cells. 2020 Nov 5;9(11):2423. doi: 10.3390/cells9112423.
13 Gene expression analysis of precision-cut human liver slices indicates stable expression of ADME-Tox related genes. Toxicol Appl Pharmacol. 2011 May 15;253(1):57-69.
14 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
15 Genistein and bisphenol A exposure cause estrogen receptor 1 to bind thousands of sites in a cell type-specific manner. Genome Res. 2012 Nov;22(11):2153-62.
16 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
17 Effects of 1alpha,25 dihydroxyvitamin D3 and testosterone on miRNA and mRNA expression in LNCaP cells. Mol Cancer. 2011 May 18;10:58.
18 Ornithine decarboxylase antizyme upregulates DNA-dependent protein kinase and enhances the nonhomologous end-joining repair of DNA double-strand breaks in human oral cancer cells. Biochemistry. 2007 Aug 7;46(31):8920-32. doi: 10.1021/bi7000328. Epub 2007 Jul 14.
19 Reproducible chemical-induced changes in gene expression profiles in human hepatoma HepaRG cells under various experimental conditions. Toxicol In Vitro. 2009 Apr;23(3):466-75. doi: 10.1016/j.tiv.2008.12.018. Epub 2008 Dec 30.
20 Global gene expression analysis reveals differences in cellular responses to hydroxyl- and superoxide anion radical-induced oxidative stress in caco-2 cells. Toxicol Sci. 2010 Apr;114(2):193-203. doi: 10.1093/toxsci/kfp309. Epub 2009 Dec 31.
21 Cannabidiol-induced transcriptomic changes and cellular senescence in human Sertoli cells. Toxicol Sci. 2023 Feb 17;191(2):227-238. doi: 10.1093/toxsci/kfac131.
22 Effects of ciglitazone and troglitazone on the proliferation of human stomach cancer cells. World J Gastroenterol. 2009 Jan 21;15(3):310-20.
23 Dasatinib reverses cancer-associated fibroblasts (CAFs) from primary lung carcinomas to a phenotype comparable to that of normal fibroblasts. Mol Cancer. 2010 Jun 27;9:168.
24 Genomic and proteomic profiling of responses to toxic metals in human lung cells. Environ Health Perspect. 2003 May;111(6):825-35.
25 Resveratrol-induced gene expression profiles in human prostate cancer cells. Cancer Epidemiol Biomarkers Prev. 2005 Mar;14(3):596-604. doi: 10.1158/1055-9965.EPI-04-0398.
26 Comparison of gene expression profiles in HepG2 cells exposed to arsenic, cadmium, nickel, and three model carcinogens for investigating the mechanisms of metal carcinogenesis. Environ Mol Mutagen. 2009 Jan;50(1):46-59.
27 Gene expression changes in human prostate carcinoma cells exposed to genotoxic and nongenotoxic aryl hydrocarbon receptor ligands. Toxicol Lett. 2011 Oct 10;206(2):178-88.
28 Endoplasmic reticulum stress and MAPK signaling pathway activation underlie leflunomide-induced toxicity in HepG2 Cells. Toxicology. 2017 Dec 1;392:11-21.
29 Inhibiting ubiquitination causes an accumulation of SUMOylated newly synthesized nuclear proteins at PML bodies. J Biol Chem. 2019 Oct 18;294(42):15218-15234. doi: 10.1074/jbc.RA119.009147. Epub 2019 Jul 8.
30 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
31 Bisphenol A induces DSB-ATM-p53 signaling leading to cell cycle arrest, senescence, autophagy, stress response, and estrogen release in human fetal lung fibroblasts. Arch Toxicol. 2018 Apr;92(4):1453-1469.
32 Pleiotropic combinatorial transcriptomes of human breast cancer cells exposed to mixtures of dietary phytoestrogens. Food Chem Toxicol. 2009 Apr;47(4):787-95.
33 Transcriptomic alterations induced by Ochratoxin A in rat and human renal proximal tubular in vitro models and comparison to a rat in vivo model. Arch Toxicol. 2012 Apr;86(4):571-89.
34 Glyphosate-based herbicides at low doses affect canonical pathways in estrogen positive and negative breast cancer cell lines. PLoS One. 2019 Jul 11;14(7):e0219610. doi: 10.1371/journal.pone.0219610. eCollection 2019.