General Information of Drug Off-Target (DOT) (ID: OTCA9ZF5)

DOT Name Ras-related protein Rab-40B (RAB40B)
Synonyms SOCS box-containing protein RAR; Protein Rar
Gene Name RAB40B
Related Disease
Adult glioblastoma ( )
Glioblastoma multiforme ( )
Acute lymphocytic leukaemia ( )
Acute myelogenous leukaemia ( )
Adenocarcinoma ( )
Bladder cancer ( )
Carcinoma ( )
Carcinoma of esophagus ( )
Colorectal carcinoma ( )
Depression ( )
Esophageal adenocarcinoma ( )
Esophageal cancer ( )
Fatty liver disease ( )
Gastric cancer ( )
Head-neck squamous cell carcinoma ( )
Hepatitis C virus infection ( )
Hepatocellular carcinoma ( )
Hypothyroidism ( )
leukaemia ( )
Leukemia ( )
Lung carcinoma ( )
Multiple sclerosis ( )
Myelodysplastic syndrome ( )
Neoplasm of esophagus ( )
Promyelocytic leukaemia ( )
Prostate cancer ( )
Prostate carcinoma ( )
Psoriasis ( )
Squamous cell carcinoma ( )
Stomach cancer ( )
Urinary bladder cancer ( )
Urinary bladder neoplasm ( )
Advanced cancer ( )
Alcohol dependence ( )
Attention deficit hyperactivity disorder ( )
Autism ( )
Bipolar disorder ( )
Bronchopulmonary dysplasia ( )
Cervical carcinoma ( )
Lung cancer ( )
Melanoma ( )
Rheumatoid arthritis ( )
Asthma ( )
Human papillomavirus infection ( )
Lymphoma ( )
Neuroblastoma ( )
Thyroid gland papillary carcinoma ( )
Thyroid tumor ( )
Wilms tumor ( )
UniProt ID
RB40B_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
Pfam ID
PF00071 ; PF07525
Sequence
MSALGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDG
RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPGVP
KILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGM
DRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARMMHGGS
YSLTTSSTHKRSSLRKVKLVRPPQSPPKNCTRNSCKIS
Function
May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
Reactome Pathway
RAB geranylgeranylation (R-HSA-8873719 )

Molecular Interaction Atlas (MIA) of This DOT

49 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Adult glioblastoma DISVP4LU Definitive Biomarker [1]
Glioblastoma multiforme DISK8246 Definitive Biomarker [1]
Acute lymphocytic leukaemia DISPX75S Strong Biomarker [2]
Acute myelogenous leukaemia DISCSPTN Strong Biomarker [3]
Adenocarcinoma DIS3IHTY Strong Altered Expression [4]
Bladder cancer DISUHNM0 Strong Posttranslational Modification [5]
Carcinoma DISH9F1N Strong Biomarker [6]
Carcinoma of esophagus DISS6G4D Strong Altered Expression [7]
Colorectal carcinoma DIS5PYL0 Strong Biomarker [8]
Depression DIS3XJ69 Strong Altered Expression [9]
Esophageal adenocarcinoma DISODWFP Strong Altered Expression [10]
Esophageal cancer DISGB2VN Strong Altered Expression [7]
Fatty liver disease DIS485QZ Strong Altered Expression [11]
Gastric cancer DISXGOUK Strong Biomarker [12]
Head-neck squamous cell carcinoma DISF7P24 Strong Biomarker [13]
Hepatitis C virus infection DISQ0M8R Strong Posttranslational Modification [14]
Hepatocellular carcinoma DIS0J828 Strong Biomarker [14]
Hypothyroidism DISR0H6D Strong Altered Expression [15]
leukaemia DISS7D1V Strong Altered Expression [16]
Leukemia DISNAKFL Strong Altered Expression [16]
Lung carcinoma DISTR26C Strong Biomarker [17]
Multiple sclerosis DISB2WZI Strong Altered Expression [18]
Myelodysplastic syndrome DISYHNUI Strong Genetic Variation [19]
Neoplasm of esophagus DISOLKAQ Strong Altered Expression [7]
Promyelocytic leukaemia DISYGG13 Strong Genetic Variation [20]
Prostate cancer DISF190Y Strong Biomarker [21]
Prostate carcinoma DISMJPLE Strong Biomarker [21]
Psoriasis DIS59VMN Strong Genetic Variation [22]
Squamous cell carcinoma DISQVIFL Strong Altered Expression [23]
Stomach cancer DISKIJSX Strong Biomarker [12]
Urinary bladder cancer DISDV4T7 Strong Posttranslational Modification [5]
Urinary bladder neoplasm DIS7HACE Strong Posttranslational Modification [5]
Advanced cancer DISAT1Z9 moderate Biomarker [24]
Alcohol dependence DIS4ZSCO moderate Genetic Variation [25]
Attention deficit hyperactivity disorder DISL8MX9 moderate Genetic Variation [25]
Autism DISV4V1Z moderate Genetic Variation [25]
Bipolar disorder DISAM7J2 moderate Genetic Variation [25]
Bronchopulmonary dysplasia DISO0BY5 moderate Genetic Variation [25]
Cervical carcinoma DIST4S00 moderate Altered Expression [26]
Lung cancer DISCM4YA moderate Biomarker [17]
Melanoma DIS1RRCY moderate Posttranslational Modification [27]
Rheumatoid arthritis DISTSB4J Disputed Altered Expression [28]
Asthma DISW9QNS Limited Biomarker [29]
Human papillomavirus infection DISX61LX Limited Genetic Variation [30]
Lymphoma DISN6V4S Limited Genetic Variation [31]
Neuroblastoma DISVZBI4 Limited Altered Expression [32]
Thyroid gland papillary carcinoma DIS48YMM Limited Altered Expression [33]
Thyroid tumor DISLVKMD Limited Altered Expression [33]
Wilms tumor DISB6T16 Limited Genetic Variation [34]
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⏷ Show the Full List of 49 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
This DOT Affected the Drug Response of 2 Drug(s)
Drug Name Drug ID Highest Status Interaction REF
Cisplatin DMRHGI9 Approved Ras-related protein Rab-40B (RAB40B) affects the response to substance of Cisplatin. [48]
Capecitabine DMTS85L Approved Ras-related protein Rab-40B (RAB40B) increases the response to substance of Capecitabine. [49]
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3 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate increases the methylation of Ras-related protein Rab-40B (RAB40B). [35]
PMID28870136-Compound-52 DMFDERP Patented PMID28870136-Compound-52 increases the phosphorylation of Ras-related protein Rab-40B (RAB40B). [44]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the methylation of Ras-related protein Rab-40B (RAB40B). [45]
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10 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of Ras-related protein Rab-40B (RAB40B). [36]
Doxorubicin DMVP5YE Approved Doxorubicin decreases the expression of Ras-related protein Rab-40B (RAB40B). [37]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of Ras-related protein Rab-40B (RAB40B). [38]
Quercetin DM3NC4M Approved Quercetin decreases the expression of Ras-related protein Rab-40B (RAB40B). [39]
Temozolomide DMKECZD Approved Temozolomide increases the expression of Ras-related protein Rab-40B (RAB40B). [40]
Vorinostat DMWMPD4 Approved Vorinostat increases the expression of Ras-related protein Rab-40B (RAB40B). [41]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene decreases the expression of Ras-related protein Rab-40B (RAB40B). [42]
Leflunomide DMR8ONJ Phase 1 Trial Leflunomide decreases the expression of Ras-related protein Rab-40B (RAB40B). [43]
Trichostatin A DM9C8NX Investigative Trichostatin A increases the expression of Ras-related protein Rab-40B (RAB40B). [46]
Coumestrol DM40TBU Investigative Coumestrol decreases the expression of Ras-related protein Rab-40B (RAB40B). [47]
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⏷ Show the Full List of 10 Drug(s)

References

1 Parallel comparison of pre-conditioning and post-conditioning effects in human cancers and keratinocytes upon acute gamma irradiation.Int J Radiat Biol. 2019 Feb;95(2):170-178. doi: 10.1080/09553002.2019.1547850. Epub 2019 Jan 4.
2 Polyclonal hemopoiesis in leukemia patients following molecularly documented remission.Leukemia. 1994 Apr;8 Suppl 1:S137-9.
3 All-trans retinoic acid enhances, and a pan-RAR antagonist counteracts, the stem cell promoting activity of EVI1 in acute myeloid leukemia.Cell Death Dis. 2019 Dec 10;10(12):944. doi: 10.1038/s41419-019-2172-2.
4 Retinoic acid receptor-alpha messenger RNA expression is increased and retinoic acid receptor-gamma expression is decreased in Barrett's intestinal metaplasia, dysplasia, adenocarcinoma sequence.Surgery. 2001 Mar;129(3):267-76. doi: 10.1067/msy.2001.110856.
5 Urinary retinoic acid receptor-2 gene promoter methylation and hyaluronidase activity as noninvasive tests for diagnosis of bladder cancer.Clin Biochem. 2012 Apr;45(6):402-7. doi: 10.1016/j.clinbiochem.2012.01.010. Epub 2012 Jan 18.
6 Human thyroid carcinoma cell lines show different retinoic acid receptor repertoires and retinoid responses.Eur J Endocrinol. 2004 Apr;150(4):547-56. doi: 10.1530/eje.0.1500547.
7 Benzo[a]pyrene diol epoxide suppresses retinoic acid receptor-beta2 expression by recruiting DNA (cytosine-5-)-methyltransferase 3A.Mol Cancer. 2010 Apr 28;9:93. doi: 10.1186/1476-4598-9-93.
8 The anti-cancer effect of retinoic acid signaling in CRC occurs via decreased growth of ALDH+ colon cancer stem cells and increased differentiation of stem cells.Oncotarget. 2018 Oct 5;9(78):34658-34669. doi: 10.18632/oncotarget.26157. eCollection 2018 Oct 5.
9 Rest-activity rhythm and sleep characteristics associated with depression symptom severity in strained dementia caregivers.J Sleep Res. 2017 Dec;26(6):718-725. doi: 10.1111/jsr.12549. Epub 2017 May 10.
10 Inhibition of farnesoid X receptor controls esophageal cancer cell growth in vitro and in nude mouse xenografts.Cancer. 2013 Apr 1;119(7):1321-9. doi: 10.1002/cncr.27910. Epub 2012 Dec 20.
11 Expression of the peroxisome proliferator-activated receptor gene is decreased in experimental alcoholic liver disease.Life Sci. 1995;56(5):307-17. doi: 10.1016/0024-3205(94)00953-8.
12 Rab40b upregulation correlates with the prognosis of gastric cancer by promoting migration, invasion, and metastasis.Med Oncol. 2015 Apr;32(4):126. doi: 10.1007/s12032-015-0562-6. Epub 2015 Mar 20.
13 RAR beta2 suppression in head and neck squamous cell carcinoma correlates with site, histology and age.Oncol Rep. 2007 Jul;18(1):105-12.
14 Hepatitis C virus Core protein overcomes all-trans retinoic acid-induced cell growth arrest by inhibiting retinoic acid receptor-2 expression via DNA methylation.Cancer Lett. 2013 Jul 28;335(2):372-9. doi: 10.1016/j.canlet.2013.02.057. Epub 2013 Mar 6.
15 Expression of proteins related to thyroid hormone function in the uterus is down-regulated at the day of implantation in hypothyroid pregnant rats.Cell Biol Int. 2019 May;43(5):486-494. doi: 10.1002/cbin.11114. Epub 2019 Mar 12.
16 From oncogene to tumor suppressor: the dual role of Myc in leukemia.Cell Cycle. 2012 May 1;11(9):1757-64. doi: 10.4161/cc.19883. Epub 2012 May 1.
17 Signalling with retinoids in the human lung: validation of new tools for the expression study of retinoid receptors.BMC Cancer. 2009 Dec 4;9:423. doi: 10.1186/1471-2407-9-423.
18 Impact of vitamin A supplementation on RAR gene expression in multiple sclerosis patients.J Mol Neurosci. 2013 Oct;51(2):478-84. doi: 10.1007/s12031-013-0090-9. Epub 2013 Aug 17.
19 A prognostic model of therapy-related myelodysplastic syndrome for predicting survival and transformation to acute myeloid leukemia.Clin Lymphoma Myeloma Leuk. 2014 Oct;14(5):401-10. doi: 10.1016/j.clml.2014.03.001. Epub 2014 May 6.
20 The NPM-RAR fusion protein associated with the t(5;17) variant of APL does not interact with PML.Leuk Res. 2006 Aug;30(8):979-86. doi: 10.1016/j.leukres.2005.12.029. Epub 2006 Feb 28.
21 Interactive effects of 9-cis-retinoic acid and androgen on proliferation, differentiation, and apoptosis of LNCaP prostate cancer cells.Eur J Cancer Prev. 2017 Jan;26(1):71-77. doi: 10.1097/CEJ.0000000000000230.
22 Loss of the Epigenetic Mark 5-hmC in Psoriasis: Implications for Epidermal Stem Cell Dysregulation.J Invest Dermatol. 2020 Jun;140(6):1266-1275.e3. doi: 10.1016/j.jid.2019.10.016. Epub 2019 Dec 11.
23 Methylation and silencing of the retinoic acid receptor-beta 2 gene in cervical cancer.BMC Cancer. 2002 Mar 21;2:4. doi: 10.1186/1471-2407-2-4.
24 The molecular physiology of nuclear retinoic acid receptors. From health to disease.Biochim Biophys Acta. 2011 Aug;1812(8):1023-31. doi: 10.1016/j.bbadis.2010.10.007. Epub 2010 Oct 20.
25 Structural variants in the retinoid receptor genes in patients with schizophrenia and other psychiatric diseases.Am J Med Genet B Neuropsychiatr Genet. 2005 Feb 5;133B(1):50-3. doi: 10.1002/ajmg.b.30113.
26 The effect of all-trans and 9-cis retinoic acid on the steady state level of HPV16 E6/E7 mRNA and cell cycle in cervical carcinoma cells.Life Sci. 1998;63(7):565-73. doi: 10.1016/s0024-3205(98)00307-5.
27 Profiling epigenetic inactivation of tumor suppressor genes in tumors and plasma from cutaneous melanoma patients.Oncogene. 2004 May 13;23(22):4014-22. doi: 10.1038/sj.onc.1207505.
28 Lipopolysaccharide mediates hepatic stellate cell activation by regulating autophagy and retinoic acid signaling.Autophagy. 2017;13(11):1813-1827. doi: 10.1080/15548627.2017.1356550. Epub 2017 Nov 21.
29 Placentaderived mesenchymal stem cells improve airway hyperresponsiveness and inflammation in asthmatic rats by modulating the Th17/Treg balance.Mol Med Rep. 2017 Dec;16(6):8137-8145. doi: 10.3892/mmr.2017.7605. Epub 2017 Sep 25.
30 Population-based case-control study on DAPK1, RAR-2 and MGMT methylation in liquid-based cytology.Arch Gynecol Obstet. 2012 May;285(5):1433-9. doi: 10.1007/s00404-011-2149-6. Epub 2011 Nov 25.
31 The t(5;17) variant of acute promyelocytic leukemia expresses a nucleophosmin-retinoic acid receptor fusion.Blood. 1996 Feb 1;87(3):882-6.
32 Expression of co-factors (SMRT and Trip-1) for retinoic acid receptors in human neuroectodermal cell lines.Biochem Biophys Res Commun. 1997 May 8;234(1):278-82. doi: 10.1006/bbrc.1997.6626.
33 mRNA expression pattern of retinoic acid and retinoid X nuclear receptor subtypes in human thyroid papillary carcinoma.Oncol Rep. 2013 Nov;30(5):2371-8. doi: 10.3892/or.2013.2670. Epub 2013 Aug 20.
34 Methylation profile of the promoter CpG islands of 31 genes that may contribute to colorectal carcinogenesis.World J Gastroenterol. 2004 Dec 1;10(23):3441-54. doi: 10.3748/wjg.v10.i23.3441.
35 Integrative omics data analyses of repeated dose toxicity of valproic acid in vitro reveal new mechanisms of steatosis induction. Toxicology. 2018 Jan 15;393:160-170.
36 Integrating multiple omics to unravel mechanisms of Cyclosporin A induced hepatotoxicity in vitro. Toxicol In Vitro. 2015 Apr;29(3):489-501.
37 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
38 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
39 Comparison of phenotypic and transcriptomic effects of false-positive genotoxins, true genotoxins and non-genotoxins using HepG2 cells. Mutagenesis. 2011 Sep;26(5):593-604.
40 Temozolomide induces activation of Wnt/-catenin signaling in glioma cells via PI3K/Akt pathway: implications in glioma therapy. Cell Biol Toxicol. 2020 Jun;36(3):273-278. doi: 10.1007/s10565-019-09502-7. Epub 2019 Nov 22.
41 A genomic approach to predict synergistic combinations for breast cancer treatment. Pharmacogenomics J. 2013 Feb;13(1):94-104. doi: 10.1038/tpj.2011.48. Epub 2011 Nov 15.
42 New insights into BaP-induced toxicity: role of major metabolites in transcriptomics and contribution to hepatocarcinogenesis. Arch Toxicol. 2016 Jun;90(6):1449-58.
43 Endoplasmic reticulum stress and MAPK signaling pathway activation underlie leflunomide-induced toxicity in HepG2 Cells. Toxicology. 2017 Dec 1;392:11-21.
44 Quantitative phosphoproteomics reveal cellular responses from caffeine, coumarin and quercetin in treated HepG2 cells. Toxicol Appl Pharmacol. 2022 Aug 15;449:116110. doi: 10.1016/j.taap.2022.116110. Epub 2022 Jun 7.
45 MEST mediates the impact of prenatal bisphenol A exposure on long-term body weight development. Clin Epigenetics. 2018 Apr 20;10:58. doi: 10.1186/s13148-018-0478-z. eCollection 2018.
46 From transient transcriptome responses to disturbed neurodevelopment: role of histone acetylation and methylation as epigenetic switch between reversible and irreversible drug effects. Arch Toxicol. 2014 Jul;88(7):1451-68.
47 Pleiotropic combinatorial transcriptomes of human breast cancer cells exposed to mixtures of dietary phytoestrogens. Food Chem Toxicol. 2009 Apr;47(4):787-95.
48 Gene expression profiling of 30 cancer cell lines predicts resistance towards 11 anticancer drugs at clinically achieved concentrations. Int J Cancer. 2006 Apr 1;118(7):1699-712. doi: 10.1002/ijc.21570.
49 Gene expression analysis using human cancer xenografts to identify novel predictive marker genes for the efficacy of 5-fluorouracil-based drugs. Cancer Sci. 2006 Jun;97(6):510-22. doi: 10.1111/j.1349-7006.2006.00204.x.