General Information of Drug Off-Target (DOT) (ID: OT6FGDLW)

DOT Name Sodium-dependent serotonin transporter (SLC6A4)
Synonyms SERT; 5HT transporter; 5HTT; Solute carrier family 6 member 4
Gene Name SLC6A4
Related Disease
Autism spectrum disorder ( )
UniProt ID
SC6A4_HUMAN
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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PDB ID
5I6X; 5I6Z; 5I71; 5I73; 5I74; 5I75; 6AWN; 6AWO; 6AWP; 6AWQ; 6DZV; 6DZW; 6DZY; 6DZZ; 6VRH; 6VRK; 6VRL; 6W2B; 6W2C; 7LI6; 7LI7; 7LI8; 7LI9; 7LIA; 7LWD; 7MGW; 7TXT
Pfam ID
PF03491 ; PF00209
Sequence
METTPLNSQKQLSACEDGEDCQENGVLQKVVPTPGDKVESGQISNGYSAVPSPGAGDDTR
HSIPATTTTLVAELHQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHVWAKRRERFVLAVVITCFFGSLVT
LTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPYWSIILGYCIGTSSFICIPTYIAYRLIIT
PGTFKERIIKSITPETPTEIPCGDIRLNAV
Function
Serotonin transporter that cotransports serotonin with one Na(+) ion in exchange for one K(+) ion and possibly one proton in an overall electroneutral transport cycle. Transports serotonin across the plasma membrane from the extracellular compartment to the cytosol thus limiting serotonin intercellular signaling. Essential for serotonin homeostasis in the central nervous system. In the developing somatosensory cortex, acts in glutamatergic neurons to control serotonin uptake and its trophic functions accounting for proper spatial organization of cortical neurons and elaboration of sensory circuits. In the mature cortex, acts primarily in brainstem raphe neurons to mediate serotonin uptake from the synaptic cleft back into the pre-synaptic terminal thus terminating serotonin signaling at the synapse. Modulates mucosal serotonin levels in the gastrointestinal tract through uptake and clearance of serotonin in enterocytes. Required for enteric neurogenesis and gastrointestinal reflexes. Regulates blood serotonin levels by ensuring rapid high affinity uptake of serotonin from plasma to platelets, where it is further stored in dense granules via vesicular monoamine transporters and then released upon stimulation. Mechanistically, the transport cycle starts with an outward-open conformation having Na1(+) and Cl(-) sites occupied. The binding of a second extracellular Na2(+) ion and serotonin substrate leads to structural changes to outward-occluded to inward-occluded to inward-open, where the Na2(+) ion and serotonin are released into the cytosol. Binding of intracellular K(+) ion induces conformational transitions to inward-occluded to outward-open and completes the cycle by releasing K(+) possibly together with a proton bound to Asp-98 into the extracellular compartment. Na1(+) and Cl(-) ions remain bound throughout the transport cycle. Additionally, displays serotonin-induced channel-like conductance for monovalent cations, mainly Na(+) ions. The channel activity is uncoupled from the transport cycle and may contribute to the membrane resting potential or excitability.
Tissue Specificity Expressed in platelets (at protein level).
KEGG Pathway
Sy.ptic vesicle cycle (hsa04721 )
Serotonergic sy.pse (hsa04726 )
Reactome Pathway
Serotonin clearance from the synaptic cleft (R-HSA-380615 )

Molecular Interaction Atlas (MIA) of This DOT

1 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Autism spectrum disorder DISXK8NV Disputed Autosomal dominant [1]
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Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
This DOT Affected the Drug Response of 10 Drug(s)
Drug Name Drug ID Highest Status Interaction REF
Clozapine DMFC71L Approved Sodium-dependent serotonin transporter (SLC6A4) affects the response to substance of Clozapine. [20]
Haloperidol DM96SE0 Approved Sodium-dependent serotonin transporter (SLC6A4) increases the Tardive dyskinesia ADR of Haloperidol. [21]
Fluoxetine DM3PD2C Approved Sodium-dependent serotonin transporter (SLC6A4) decreases the response to substance of Fluoxetine. [22]
Sertraline DM0FB1J Approved Sodium-dependent serotonin transporter (SLC6A4) increases the response to substance of Sertraline. [23]
Clomipramine DMINRKW Approved Sodium-dependent serotonin transporter (SLC6A4) increases the Therapeutic agent toxicity ADR of Clomipramine. [21]
Citalopram DM2G9AE Approved Sodium-dependent serotonin transporter (SLC6A4) affects the response to substance of Citalopram. [24]
Bupropion DM5PCS7 Approved Sodium-dependent serotonin transporter (SLC6A4) affects the response to substance of Bupropion. [25]
Nortriptyline DM4KDYJ Approved Sodium-dependent serotonin transporter (SLC6A4) decreases the response to substance of Nortriptyline. [22]
Dextroamphetamine DMMIHVP Approved Sodium-dependent serotonin transporter (SLC6A4) affects the response to substance of Dextroamphetamine. [26]
Escitalopram DMFK9HG Approved Sodium-dependent serotonin transporter (SLC6A4) increases the Dose-limiting toxicity ADR of Escitalopram. [27]
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⏷ Show the Full List of 10 Drug(s)
25 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [2]
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [3]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [4]
Estradiol DMUNTE3 Approved Estradiol decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [2]
Quercetin DM3NC4M Approved Quercetin decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [5]
Hydrogen peroxide DM1NG5W Approved Hydrogen peroxide affects the expression of Sodium-dependent serotonin transporter (SLC6A4). [6]
Triclosan DMZUR4N Approved Triclosan decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [7]
Cocaine DMSOX7I Approved Cocaine decreases the activity of Sodium-dependent serotonin transporter (SLC6A4). [8]
Simvastatin DM30SGU Approved Simvastatin increases the activity of Sodium-dependent serotonin transporter (SLC6A4). [9]
Methamphetamine DMPM4SK Approved Methamphetamine decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [10]
Colchicine DM2POTE Approved Colchicine decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [2]
Hydroxyurea DMOQVU9 Approved Hydroxyurea decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [2]
Lamivudine DMI347A Approved Lamivudine increases the expression of Sodium-dependent serotonin transporter (SLC6A4). [11]
Gabapentin DM6T924 Approved Gabapentin decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [2]
Paroxetine DM5PVQE Approved Paroxetine decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [12]
Sulfadiazine DMTW3R8 Approved Sulfadiazine decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [2]
Urethane DM7NSI0 Phase 4 Urethane decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [15]
Ribavirin DMEYLH9 Phase 1 Trial Ribavirin increases the expression of Sodium-dependent serotonin transporter (SLC6A4). [11]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [2]
Formaldehyde DM7Q6M0 Investigative Formaldehyde decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [17]
3R14S-OCHRATOXIN A DM2KEW6 Investigative 3R14S-OCHRATOXIN A decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [2]
Glyphosate DM0AFY7 Investigative Glyphosate decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [2]
Lithium chloride DMHYLQ2 Investigative Lithium chloride decreases the expression of Sodium-dependent serotonin transporter (SLC6A4). [2]
Serotonin DMOFCRY Investigative Serotonin increases the activity of Sodium-dependent serotonin transporter (SLC6A4). [18]
Methylenedioxymethamphetamine DMYVU47 Investigative Methylenedioxymethamphetamine decreases the activity of Sodium-dependent serotonin transporter (SLC6A4). [19]
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⏷ Show the Full List of 25 Drug(s)
2 Drug(s) Affected the Protein Interaction/Cellular Processes of This DOT
Drug Name Drug ID Highest Status Interaction REF
Aripiprazole DM3NUMH Approved Aripiprazole affects the binding of Sodium-dependent serotonin transporter (SLC6A4). [13]
Mepyramine DMB4SFH Approved Mepyramine affects the binding of Sodium-dependent serotonin transporter (SLC6A4). [14]
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1 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene increases the methylation of Sodium-dependent serotonin transporter (SLC6A4). [16]
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References

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7 Transcriptome and DNA methylome dynamics during triclosan-induced cardiomyocyte differentiation toxicity. Stem Cells Int. 2018 Oct 29;2018:8608327.
8 Relationship of the serotonin transporter with prolactin response to meta-chlorophenylpiperazine in cocaine dependence. J Psychiatr Res. 2008 Oct;42(14):1213-9. doi: 10.1016/j.jpsychires.2008.01.008. Epub 2008 Mar 5.
9 Cholesterol-lowering therapy evokes time-limited changes in serotonergic transmission. Psychiatry Res. 2005 Feb 28;133(2-3):197-203. doi: 10.1016/j.psychres.2004.11.005.
10 Brain serotonin transporter density and aggression in abstinent methamphetamine abusers. Arch Gen Psychiatry. 2006 Jan;63(1):90-100. doi: 10.1001/archpsyc.63.1.90.
11 Serotonin transporter mRNA expression is decreased by lamivudine and ribavirin and increased by interferon in immune cells. Scand J Immunol. 2006 Feb;63(2):106-15. doi: 10.1111/j.1365-3083.2005.01715.x.
12 Serotonin transporter mRNA expression in peripheral leukocytes of patients with major depression before and after treatment with paroxetine. Neurosci Lett. 2005 Nov 25;389(1):12-6. doi: 10.1016/j.neulet.2005.06.048.
13 Design and synthesis of novel arylpiperazine derivatives containing the imidazole core targeting 5-HT(2A) receptor and 5-HT transporter. J Med Chem. 2011 Sep 22;54(18):6305-18. doi: 10.1021/jm200682b. Epub 2011 Aug 23.
14 GBR compounds and mepyramines as cocaine abuse therapeutics: chemometric studies on selectivity using grid independent descriptors (GRIND). J Med Chem. 2002 Apr 11;45(8):1577-84. doi: 10.1021/jm011007+.
15 Ethyl carbamate induces cell death through its effects on multiple metabolic pathways. Chem Biol Interact. 2017 Nov 1;277:21-32.
16 Air pollution and DNA methylation alterations in lung cancer: A systematic and comparative study. Oncotarget. 2017 Jan 3;8(1):1369-1391. doi: 10.18632/oncotarget.13622.
17 Cellular reactions to long-term volatile organic compound (VOC) exposures. Sci Rep. 2016 Dec 1;6:37842. doi: 10.1038/srep37842.
18 Functional characterization of N-octyl 4-methylamphetamine variants and related bivalent compounds at the dopamine and serotonin transporters using Ca(2+) channels as sensors. Toxicol Appl Pharmacol. 2021 May 15;419:115513. doi: 10.1016/j.taap.2021.115513. Epub 2021 Mar 27.
19 Pharmacological characterization of the aminorex analogs 4-MAR, 4,4'-DMAR, and 3,4-DMAR. Neurotoxicology. 2019 May;72:95-100. doi: 10.1016/j.neuro.2019.02.011. Epub 2019 Feb 15.
20 Influence of serotonin transporter gene polymorphisms on clozapine response in Brazilian schizophrenics. J Psychiatr Res. 2010 Dec;44(16):1158-62. doi: 10.1016/j.jpsychires.2010.04.003. Epub 2010 May 10.
21 ADReCS-Target: target profiles for aiding drug safety research and application. Nucleic Acids Res. 2018 Jan 4;46(D1):D911-D917. doi: 10.1093/nar/gkx899.
22 Age-dependent antidepressant pharmacogenomics: polymorphisms of the serotonin transporter and G protein beta3 subunit as predictors of response to fluoxetine and nortriptyline. Int J Neuropsychopharmacol. 2003 Dec;6(4):339-46. doi: 10.1017/S1461145703003663.
23 The serotonin transporter polymorphism, 5HTTLPR, is associated with a faster response time to sertraline in an elderly population with major depressive disorder. Psychopharmacology (Berl). 2004 Aug;174(4):525-9. doi: 10.1007/s00213-003-1562-3. Epub 2003 Sep 4.
24 5-HTTLPR polymorphism of the serotonin transporter gene predicts non-remission in major depression patients treated with citalopram in a 12-weeks follow up study. J Clin Psychopharmacol. 2003 Dec;23(6):563-7. doi: 10.1097/01.jcp.0000095350.32154.73.
25 Genetic variants in the serotonin transporter influence the efficacy of bupropion and nortriptyline in smoking cessation. Addiction. 2012 Jan;107(1):178-87. doi: 10.1111/j.1360-0443.2011.03534.x. Epub 2011 Sep 21.
26 Serotonin transporter genotype and acute subjective response to amphetamine. Am J Addict. 2006 Sep-Oct;15(5):327-35. doi: 10.1080/10550490600859868.
27 Serotonin transporter promoter region polymorphisms do not influence treatment response to escitalopram in patients with major depression. Eur Neuropsychopharmacol. 2009 Jun;19(6):451-6. doi: 10.1016/j.euroneuro.2009.01.010. Epub 2009 Mar 9.