General Information of Drug Off-Target (DOT) (ID: OTKLBLS6)

DOT Name Nidogen-1 (NID1)
Synonyms NID-1; Entactin
Gene Name NID1
Related Disease
Diabetic retinopathy ( )
Melanoma ( )
Advanced cancer ( )
Breast cancer ( )
Colon cancer ( )
Colon carcinoma ( )
Constipation ( )
Endometrial cancer ( )
Endometrial carcinoma ( )
Epithelial ovarian cancer ( )
Gastric cancer ( )
Hirschsprung disease ( )
Neoplasm ( )
Non-small-cell lung cancer ( )
Oral cavity squamous cell carcinoma ( )
Ovarian cancer ( )
Ovarian neoplasm ( )
Dandy-Walker syndrome ( )
Breast carcinoma ( )
Ileus ( )
Melanocytic nevus ( )
Prostate cancer ( )
Prostate carcinoma ( )
Squamous cell carcinoma ( )
UniProt ID
NID1_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
Pfam ID
PF12662 ; PF12947 ; PF07645 ; PF14670 ; PF07474 ; PF00058 ; PF06119 ; PF00086
Sequence
MLASSSRIRAAWTRALLLPLLLAGPVGCLSRQELFPFGPGQGDLELEDGDDFVSPALELS
GALRFYDRSDIDAVYVTTNGIIATSEPPAKESHPGLFPPTFGAVAPFLADLDTTDGLGKV
YYREDLSPSITQRAAECVHRGFPEISFQPSSAVVVTWESVAPYQGPSRDPDQKGKRNTFQ
AVLASSDSSSYAIFLYPEDGLQFHTTFSKKENNQVPAVVAFSQGSVGFLWKSNGAYNIFA
NDRESVENLAKSSNSGQQGVWVFEIGSPATTNGVVPADVILGTEDGAEYDDEDEDYDLAT
TRLGLEDVGTTPFSYKALRRGGADTYSVPSVLSPRRAATERPLGPPTERTRSFQLAVETF
HQQHPQVIDVDEVEETGVVFSYNTDSRQTCANNRHQCSVHAECRDYATGFCCSCVAGYTG
NGRQCVAEGSPQRVNGKVKGRIFVGSSQVPIVFENTDLHSYVVMNHGRSYTAISTIPETV
GYSLLPLAPVGGIIGWMFAVEQDGFKNGFSITGGEFTRQAEVTFVGHPGNLVIKQRFSGI
DEHGHLTIDTELEGRVPQIPFGSSVHIEPYTELYHYSTSVITSSSTREYTVTEPERDGAS
PSRIYTYQWRQTITFQECVHDDSRPALPSTQQLSVDSVFVLYNQEEKILRYALSNSIGPV
REGSPDALQNPCYIGTHGCDTNAACRPGPRTQFTCECSIGFRGDGRTCYDIDECSEQPSV
CGSHTICNNHPGTFRCECVEGYQFSDEGTCVAVVDQRPINYCETGLHNCDIPQRAQCIYT
GGSSYTCSCLPGFSGDGQACQDVDECQPSRCHPDAFCYNTPGSFTCQCKPGYQGDGFRCV
PGEVEKTRCQHEREHILGAAGATDPQRPIPPGLFVPECDAHGHYAPTQCHGSTGYCWCVD
RDGREVEGTRTRPGMTPPCLSTVAPPIHQGPAVPTAVIPLPPGTHLLFAQTGKIERLPLE
GNTMRKTEAKAFLHVPAKVIIGLAFDCVDKMVYWTDITEPSIGRASLHGGEPTTIIRQDL
GSPEGIAVDHLGRNIFWTDSNLDRIEVAKLDGTQRRVLFETDLVNPRGIVTDSVRGNLYW
TDWNRDNPKIETSYMDGTNRRILVQDDLGLPNGLTFDAFSSQLCWVDAGTNRAECLNPSQ
PSRRKALEGLQYPFAVTSYGKNLYFTDWKMNSVVALDLAISKETDAFQPHKQTRLYGITT
ALSQCPQGHNYCSVNNGGCTHLCLATPGSRTCRCPDNTLGVDCIEQK
Function
Sulfated glycoprotein widely distributed in basement membranes and tightly associated with laminin. Also binds to collagen IV and perlecan. It probably has a role in cell-extracellular matrix interactions.
KEGG Pathway
Cytoskeleton in muscle cells (hsa04820 )
Reactome Pathway
Laminin interactions (R-HSA-3000157 )
Degradation of the extracellular matrix (R-HSA-1474228 )

Molecular Interaction Atlas (MIA) of This DOT

24 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Diabetic retinopathy DISHGUJM Definitive Biomarker [1]
Melanoma DIS1RRCY Definitive Genetic Variation [2]
Advanced cancer DISAT1Z9 Strong Biomarker [3]
Breast cancer DIS7DPX1 Strong Biomarker [4]
Colon cancer DISVC52G Strong Posttranslational Modification [5]
Colon carcinoma DISJYKUO Strong Posttranslational Modification [5]
Constipation DISRQXWI Strong Genetic Variation [6]
Endometrial cancer DISW0LMR Strong Biomarker [7]
Endometrial carcinoma DISXR5CY Strong Biomarker [7]
Epithelial ovarian cancer DIS56MH2 Strong Biomarker [8]
Gastric cancer DISXGOUK Strong Posttranslational Modification [5]
Hirschsprung disease DISUUSM1 Strong Biomarker [9]
Neoplasm DISZKGEW Strong Altered Expression [10]
Non-small-cell lung cancer DIS5Y6R9 Strong Biomarker [3]
Oral cavity squamous cell carcinoma DISQVJVA Strong Altered Expression [11]
Ovarian cancer DISZJHAP Strong Biomarker [8]
Ovarian neoplasm DISEAFTY Strong Biomarker [8]
Dandy-Walker syndrome DIS4HC6W moderate Biomarker [12]
Breast carcinoma DIS2UE88 Limited Biomarker [4]
Ileus DISH7JW9 Limited Biomarker [13]
Melanocytic nevus DISYS32D Limited Genetic Variation [2]
Prostate cancer DISF190Y Limited Biomarker [14]
Prostate carcinoma DISMJPLE Limited Biomarker [14]
Squamous cell carcinoma DISQVIFL Limited Altered Expression [10]
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⏷ Show the Full List of 24 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
This DOT Affected the Drug Response of 1 Drug(s)
Drug Name Drug ID Highest Status Interaction REF
Cyclophosphamide DM4O2Z7 Approved Nidogen-1 (NID1) affects the response to substance of Cyclophosphamide. [36]
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19 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate increases the expression of Nidogen-1 (NID1). [15]
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of Nidogen-1 (NID1). [16]
Tretinoin DM49DUI Approved Tretinoin increases the expression of Nidogen-1 (NID1). [17]
Acetaminophen DMUIE76 Approved Acetaminophen decreases the expression of Nidogen-1 (NID1). [18]
Doxorubicin DMVP5YE Approved Doxorubicin decreases the expression of Nidogen-1 (NID1). [19]
Cisplatin DMRHGI9 Approved Cisplatin increases the expression of Nidogen-1 (NID1). [20]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of Nidogen-1 (NID1). [21]
Arsenic DMTL2Y1 Approved Arsenic affects the expression of Nidogen-1 (NID1). [22]
Triclosan DMZUR4N Approved Triclosan decreases the expression of Nidogen-1 (NID1). [23]
Carbamazepine DMZOLBI Approved Carbamazepine affects the expression of Nidogen-1 (NID1). [24]
Methotrexate DM2TEOL Approved Methotrexate increases the expression of Nidogen-1 (NID1). [25]
Dexamethasone DMMWZET Approved Dexamethasone increases the expression of Nidogen-1 (NID1). [26]
Hydroquinone DM6AVR4 Approved Hydroquinone decreases the expression of Nidogen-1 (NID1). [27]
Rosiglitazone DMILWZR Approved Rosiglitazone affects the expression of Nidogen-1 (NID1). [28]
Irinotecan DMP6SC2 Approved Irinotecan increases the expression of Nidogen-1 (NID1). [29]
SNDX-275 DMH7W9X Phase 3 SNDX-275 increases the expression of Nidogen-1 (NID1). [30]
Trichostatin A DM9C8NX Investigative Trichostatin A increases the expression of Nidogen-1 (NID1). [33]
Formaldehyde DM7Q6M0 Investigative Formaldehyde increases the expression of Nidogen-1 (NID1). [34]
Bilirubin DMI0V4O Investigative Bilirubin decreases the expression of Nidogen-1 (NID1). [35]
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⏷ Show the Full List of 19 Drug(s)
2 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene increases the methylation of Nidogen-1 (NID1). [31]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the methylation of Nidogen-1 (NID1). [32]
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References

1 Overexpression of matrix metalloproteinase-10 and matrix metalloproteinase-3 in human diabetic corneas: a possible mechanism of basement membrane and integrin alterations.Am J Pathol. 2001 Feb;158(2):723-34. doi: 10.1016/S0002-9440(10)64015-1.
2 Higher Nevus Count Exhibits a Distinct DNA Methylation Signature in Healthy Human Skin: Implications for Melanoma.J Invest Dermatol. 2017 Apr;137(4):910-920. doi: 10.1016/j.jid.2016.11.029. Epub 2016 Dec 18.
3 Nidogen-1 Degraded by Cathepsin S can be Quantified in Serum and is Associated with Non-Small Cell Lung Cancer.Neoplasia. 2017 Apr;19(4):271-278. doi: 10.1016/j.neo.2017.01.008. Epub 2017 Mar 7.
4 Identification of Nidogen 1 as a lung metastasis protein through secretome analysis.Genes Dev. 2017 Jul 15;31(14):1439-1455. doi: 10.1101/gad.301937.117. Epub 2017 Aug 21.
5 Nidogen 1 and 2 gene promoters are aberrantly methylated in human gastrointestinal cancer.Mol Cancer. 2007 Feb 28;6:17. doi: 10.1186/1476-4598-6-17.
6 Neuronal intestinal dysplasia: clinical experience in Italian patients.Eur J Pediatr Surg. 1994 Oct;4(5):287-92. doi: 10.1055/s-2008-1066119.
7 Nidogen 1 and Nuclear Protein 1: novel targets of ETV5 transcription factor involved in endometrial cancer invasion.Clin Exp Metastasis. 2015 Jun;32(5):467-78. doi: 10.1007/s10585-015-9720-7. Epub 2015 Apr 30.
8 NID1, a new regulator of EMT required for metastasis and chemoresistance of ovarian cancer cells.Oncotarget. 2017 May 16;8(20):33110-33121. doi: 10.18632/oncotarget.16145.
9 Nidogen-1 is a common target of microRNAs MiR-192/215 in the pathogenesis of Hirschsprung's disease.J Neurochem. 2015 Jul;134(1):39-46. doi: 10.1111/jnc.13118. Epub 2015 May 4.
10 Enhanced expression of nidogen 1 around the nest of basal cell carcinoma compared with that around squamous cell carcinoma.Med Mol Morphol. 2019 Jun;52(2):99-105. doi: 10.1007/s00795-018-0207-x. Epub 2018 Oct 1.
11 Proteomic Profiling of Paired Interstitial Fluids Reveals Dysregulated Pathways and Salivary NID1 as a Biomarker of Oral Cavity Squamous Cell Carcinoma.Mol Cell Proteomics. 2019 Oct;18(10):1939-1949. doi: 10.1074/mcp.RA119.001654. Epub 2019 Jul 17.
12 NID1 variant associated with occipital cephaloceles in a family expressing a spectrum of phenotypes.Am J Med Genet A. 2019 May;179(5):837-841. doi: 10.1002/ajmg.a.61095. Epub 2019 Feb 17.
13 Neuronal intestinal malformations: a retro- and prospective study on 203 patients.Eur J Pediatr Surg. 1994 Oct;4(5):279-86. doi: 10.1055/s-2008-1066118.
14 Androgen-Induced TMPRSS2 Activates Matriptase and Promotes Extracellular Matrix Degradation, Prostate Cancer Cell Invasion, Tumor Growth, and Metastasis.Cancer Res. 2015 Jul 15;75(14):2949-60. doi: 10.1158/0008-5472.CAN-14-3297. Epub 2015 May 27.
15 Design principles of concentration-dependent transcriptome deviations in drug-exposed differentiating stem cells. Chem Res Toxicol. 2014 Mar 17;27(3):408-20.
16 Comparison of HepG2 and HepaRG by whole-genome gene expression analysis for the purpose of chemical hazard identification. Toxicol Sci. 2010 May;115(1):66-79.
17 Constitutive gene expression predisposes morphogen-mediated cell fate responses of NT2/D1 and 27X-1 human embryonal carcinoma cells. Stem Cells. 2007 Mar;25(3):771-8. doi: 10.1634/stemcells.2006-0271. Epub 2006 Nov 30.
18 Gene expression analysis of precision-cut human liver slices indicates stable expression of ADME-Tox related genes. Toxicol Appl Pharmacol. 2011 May 15;253(1):57-69.
19 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
20 Activation of AIFM2 enhances apoptosis of human lung cancer cells undergoing toxicological stress. Toxicol Lett. 2016 Sep 6;258:227-236.
21 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
22 Prenatal arsenic exposure and shifts in the newborn proteome: interindividual differences in tumor necrosis factor (TNF)-responsive signaling. Toxicol Sci. 2014 Jun;139(2):328-37. doi: 10.1093/toxsci/kfu053. Epub 2014 Mar 27.
23 Transcriptome and DNA methylome dynamics during triclosan-induced cardiomyocyte differentiation toxicity. Stem Cells Int. 2018 Oct 29;2018:8608327.
24 Gene Expression Regulation and Pathway Analysis After Valproic Acid and Carbamazepine Exposure in a Human Embryonic Stem Cell-Based Neurodevelopmental Toxicity Assay. Toxicol Sci. 2015 Aug;146(2):311-20. doi: 10.1093/toxsci/kfv094. Epub 2015 May 15.
25 Global molecular effects of tocilizumab therapy in rheumatoid arthritis synovium. Arthritis Rheumatol. 2014 Jan;66(1):15-23.
26 Identification of mechanisms of action of bisphenol a-induced human preadipocyte differentiation by transcriptional profiling. Obesity (Silver Spring). 2014 Nov;22(11):2333-43.
27 Keratinocyte-derived IL-36gama plays a role in hydroquinone-induced chemical leukoderma through inhibition of melanogenesis in human epidermal melanocytes. Arch Toxicol. 2019 Aug;93(8):2307-2320.
28 Proteomic analysis of human adipose tissue after rosiglitazone treatment shows coordinated changes to promote glucose uptake. Obesity (Silver Spring). 2010 Jan;18(1):27-34. doi: 10.1038/oby.2009.208. Epub 2009 Jun 25.
29 In vitro and in vivo irinotecan-induced changes in expression profiles of cell cycle and apoptosis-associated genes in acute myeloid leukemia cells. Mol Cancer Ther. 2005 Jun;4(6):885-900.
30 Definition of transcriptome-based indices for quantitative characterization of chemically disturbed stem cell development: introduction of the STOP-Toxukn and STOP-Toxukk tests. Arch Toxicol. 2017 Feb;91(2):839-864.
31 Air pollution and DNA methylation alterations in lung cancer: A systematic and comparative study. Oncotarget. 2017 Jan 3;8(1):1369-1391. doi: 10.18632/oncotarget.13622.
32 DNA methylome-wide alterations associated with estrogen receptor-dependent effects of bisphenols in breast cancer. Clin Epigenetics. 2019 Oct 10;11(1):138. doi: 10.1186/s13148-019-0725-y.
33 From transient transcriptome responses to disturbed neurodevelopment: role of histone acetylation and methylation as epigenetic switch between reversible and irreversible drug effects. Arch Toxicol. 2014 Jul;88(7):1451-68.
34 Characterization of formaldehyde's genotoxic mode of action by gene expression analysis in TK6 cells. Arch Toxicol. 2013 Nov;87(11):1999-2012.
35 Global changes in gene regulation demonstrate that unconjugated bilirubin is able to upregulate and activate select components of the endoplasmic reticulum stress response pathway. J Biochem Mol Toxicol. 2010 Mar-Apr;24(2):73-88.
36 Gene expression profiling of 30 cancer cell lines predicts resistance towards 11 anticancer drugs at clinically achieved concentrations. Int J Cancer. 2006 Apr 1;118(7):1699-712. doi: 10.1002/ijc.21570.