General Information of Drug Off-Target (DOT) (ID: OTS1V4XB)

DOT Name Thymidine kinase 2, mitochondrial (TK2)
Synonyms EC 2.7.1.21; 2'-deoxyuridine kinase TK2; EC 2.7.1.74; Deoxycytidine kinase TK2; EC 2.7.1.-; Mt-TK
Gene Name TK2
Related Disease
Mitochondrial disease ( )
Mitochondrial DNA depletion syndrome, myopathic form ( )
Coenzyme Q10 deficiency ( )
Dentatorubral-pallidoluysian atrophy ( )
Dilated cardiomyopathy 1A ( )
Gastrointestinal stromal tumour ( )
Germ cell tumor ( )
Hereditary cerebellar ataxia ( )
Herpes simplex infection ( )
Leber hereditary optic neuropathy ( )
Liver failure ( )
Mitochondrial DNA depletion syndrome ( )
Mitochondrial encephalomyopathy ( )
Myelodysplastic syndrome ( )
Myopathy ( )
Progressive external ophthalmoplegia ( )
Ptosis ( )
Spinal muscular atrophy ( )
Spinal muscular atrophy, type III ( )
Spinocerebellar ataxia type 3 ( )
Spinocerebellar ataxia type 6 ( )
Crouzon syndrome ( )
Fragile X-associated tremor/ataxia syndrome ( )
Huntington disease-like 2 ( )
Myotonic dystrophy type 2 ( )
Respiratory failure ( )
Sensorineural hearing loss disorder ( )
Spinocerebellar ataxia type 10 ( )
Autosomal recessive progressive external ophthalmoplegia ( )
Epilepsy ( )
Mitochondrial myopathy ( )
Sickle-cell anaemia ( )
Skeletal muscle disorder ( )
Systemic primary carnitine deficiency disease ( )
UniProt ID
KITM_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
EC Number
2.7.1.-; 2.7.1.21; 2.7.1.74
Pfam ID
PF01712
Sequence
MLLWPLRGWAARALRCFGPGSRGSPASGPGPRRVQRRAWPPDKEQEKEKKSVICVEGNIA
SGKTTCLEFFSNATDVEVLTEPVSKWRNVRGHNPLGLMYHDASRWGLTLQTYVQLTMLDR
HTRPQVSSVRLMERSIHSARYIFVENLYRSGKMPEVDYVVLSEWFDWILRNMDVSVDLIV
YLRTNPETCYQRLKKRCREEEKVIPLEYLEAIHHLHEEWLIKGSLFPMAAPVLVIEADHH
MERMLELFEQNRDRILTPENRKHCP
Function
Phosphorylates thymidine, deoxycytidine, and deoxyuridine in the mitochondrial matrix. In non-replicating cells, where cytosolic dNTP synthesis is down-regulated, mtDNA synthesis depends solely on TK2 and DGUOK. Widely used as target of antiviral and chemotherapeutic agents.
Tissue Specificity Predominantly expressed in liver, pancreas, muscle, and brain.
KEGG Pathway
Pyrimidine metabolism (hsa00240 )
Drug metabolism - other enzymes (hsa00983 )
Metabolic pathways (hsa01100 )
Nucleotide metabolism (hsa01232 )
Reactome Pathway
Pyrimidine salvage (R-HSA-73614 )
BioCyc Pathway
MetaCyc:HS09420-MONOMER

Molecular Interaction Atlas (MIA) of This DOT

34 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Mitochondrial disease DISKAHA3 Definitive Autosomal recessive [1]
Mitochondrial DNA depletion syndrome, myopathic form DIS9CBUI Definitive Autosomal recessive [2]
Coenzyme Q10 deficiency DIS1HGDF Strong Genetic Variation [3]
Dentatorubral-pallidoluysian atrophy DISHWE0K Strong Genetic Variation [4]
Dilated cardiomyopathy 1A DIS0RK9Z Strong Altered Expression [5]
Gastrointestinal stromal tumour DIS6TJYS Strong Genetic Variation [6]
Germ cell tumor DIS62070 Strong Genetic Variation [6]
Hereditary cerebellar ataxia DIS17A1W Strong Genetic Variation [4]
Herpes simplex infection DISL1SAV Strong Genetic Variation [7]
Leber hereditary optic neuropathy DIS7Y2EE Strong Genetic Variation [8]
Liver failure DISLGEL6 Strong Genetic Variation [9]
Mitochondrial DNA depletion syndrome DISIGZSM Strong Genetic Variation [10]
Mitochondrial encephalomyopathy DISA6PTN Strong Genetic Variation [11]
Myelodysplastic syndrome DISYHNUI Strong Altered Expression [12]
Myopathy DISOWG27 Strong Biomarker [13]
Progressive external ophthalmoplegia DISX4ATI Strong Genetic Variation [14]
Ptosis DISJZNIY Strong Genetic Variation [15]
Spinal muscular atrophy DISTLKOB Strong Genetic Variation [16]
Spinal muscular atrophy, type III DISNG3SD Strong Genetic Variation [17]
Spinocerebellar ataxia type 3 DISQBQID Strong Biomarker [18]
Spinocerebellar ataxia type 6 DISH7224 Strong Genetic Variation [18]
Crouzon syndrome DISIAVZU moderate Genetic Variation [19]
Fragile X-associated tremor/ataxia syndrome DISKB25R moderate Biomarker [20]
Huntington disease-like 2 DISM3G09 moderate Genetic Variation [20]
Myotonic dystrophy type 2 DIS5ZWF1 moderate Genetic Variation [20]
Respiratory failure DISVMYJO moderate Genetic Variation [21]
Sensorineural hearing loss disorder DISJV45Z moderate Genetic Variation [22]
Spinocerebellar ataxia type 10 DISEJVJK moderate Genetic Variation [20]
Autosomal recessive progressive external ophthalmoplegia DISY53WH Supportive Autosomal recessive [14]
Epilepsy DISBB28L Disputed Genetic Variation [23]
Mitochondrial myopathy DIS9SA7V Limited Genetic Variation [24]
Sickle-cell anaemia DIS5YNZB Limited Biomarker [18]
Skeletal muscle disorder DISR9DGU Limited Biomarker [25]
Systemic primary carnitine deficiency disease DIS9OPZ4 Limited Biomarker [18]
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⏷ Show the Full List of 34 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
This DOT Affected the Drug Response of 1 Drug(s)
Drug Name Drug ID Highest Status Interaction REF
Fialuridine DMCIGRB Phase 2 Thymidine kinase 2, mitochondrial (TK2) affects the response to substance of Fialuridine. [41]
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15 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the expression of Thymidine kinase 2, mitochondrial (TK2). [26]
Acetaminophen DMUIE76 Approved Acetaminophen decreases the expression of Thymidine kinase 2, mitochondrial (TK2). [27]
Doxorubicin DMVP5YE Approved Doxorubicin decreases the expression of Thymidine kinase 2, mitochondrial (TK2). [28]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of Thymidine kinase 2, mitochondrial (TK2). [29]
Ivermectin DMDBX5F Approved Ivermectin increases the expression of Thymidine kinase 2, mitochondrial (TK2). [30]
Carbamazepine DMZOLBI Approved Carbamazepine affects the expression of Thymidine kinase 2, mitochondrial (TK2). [31]
Fluorouracil DMUM7HZ Approved Fluorouracil increases the expression of Thymidine kinase 2, mitochondrial (TK2). [32]
Hydroquinone DM6AVR4 Approved Hydroquinone decreases the expression of Thymidine kinase 2, mitochondrial (TK2). [33]
Cytarabine DMZD5QR Approved Cytarabine decreases the expression of Thymidine kinase 2, mitochondrial (TK2). [34]
Diclofenac DMPIHLS Approved Diclofenac affects the expression of Thymidine kinase 2, mitochondrial (TK2). [31]
Zidovudine DM4KI7O Approved Zidovudine increases the expression of Thymidine kinase 2, mitochondrial (TK2). [35]
Zalcitabine DMH7MUV Approved Zalcitabine decreases the expression of Thymidine kinase 2, mitochondrial (TK2). [36]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene decreases the expression of Thymidine kinase 2, mitochondrial (TK2). [37]
Trichostatin A DM9C8NX Investigative Trichostatin A decreases the expression of Thymidine kinase 2, mitochondrial (TK2). [39]
GALLICACID DM6Y3A0 Investigative GALLICACID decreases the expression of Thymidine kinase 2, mitochondrial (TK2). [40]
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⏷ Show the Full List of 15 Drug(s)
1 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the methylation of Thymidine kinase 2, mitochondrial (TK2). [38]
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References

1 Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020 Feb;22(2):245-257. doi: 10.1038/s41436-019-0686-8. Epub 2019 Nov 6.
2 Flexible and scalable diagnostic filtering of genomic variants using G2P with Ensembl VEP. Nat Commun. 2019 May 30;10(1):2373. doi: 10.1038/s41467-019-10016-3.
3 A defect in the thymidine kinase 2 gene causing isolated mitochondrial myopathy without mtDNA depletion.Eur J Paediatr Neurol. 2008 Jul;12(4):309-13. doi: 10.1016/j.ejpn.2007.09.005. Epub 2007 Oct 22.
4 SCA31 is rare in the Chinese population on Taiwan.Neurobiol Aging. 2012 Feb;33(2):426.e23-4. doi: 10.1016/j.neurobiolaging.2010.10.012. Epub 2010 Dec 15.
5 Thymidine kinase and mtDNA depletion in human cardiomyopathy: epigenetic and translational evidence for energy starvation.Physiol Genomics. 2013 Jul 15;45(14):590-6. doi: 10.1152/physiolgenomics.00014.2013. Epub 2013 May 21.
6 Familial gastrointestinal stromal tumors associated with dysphagia and novel type germline mutation of KIT gene.Gastroenterology. 2002 May;122(5):1493-9. doi: 10.1053/gast.2002.33024.
7 CRISPR/Cas9-Mediated Knockin Application in Cell Therapy: A Non-viral Procedure for Bystander Treatment of Glioma in Mice.Mol Ther Nucleic Acids. 2017 Sep 15;8:395-403. doi: 10.1016/j.omtn.2017.07.012. Epub 2017 Jul 18.
8 Beyond cervical lipomas: myoclonus, gait disorder and multisystem involvement leading to mitochondrial disease.BMJ Case Rep. 2017 Jun 19;2017:bcr2016218861. doi: 10.1136/bcr-2016-218861.
9 Depletion of the other genome-mitochondrial DNA depletion syndromes in humans.J Mol Med (Berl). 2002 Jul;80(7):389-96. doi: 10.1007/s00109-002-0343-5. Epub 2002 May 24.
10 Clinical application of whole exome sequencing reveals a novel compound heterozygous TK2-mutation in two brothers with rapidly progressive combined muscle-brain atrophy, axonal neuropathy, and status epilepticus.Mitochondrion. 2015 Jan;20:1-6. doi: 10.1016/j.mito.2014.10.007. Epub 2014 Nov 4.
11 Transcriptomic profiling of TK2 deficient human skeletal muscle suggests a role for the p53 signalling pathway and identifies growth and differentiation factor-15 as a potential novel biomarker for mitochondrial myopathies.BMC Genomics. 2014 Feb 1;15:91. doi: 10.1186/1471-2164-15-91.
12 Reversion of mtDNA depletion in a patient with TK2 deficiency.Neurology. 2003 Apr 8;60(7):1203-5. doi: 10.1212/01.wnl.0000055928.58122.47.
13 Advances in primary mitochondrial myopathies.Curr Opin Neurol. 2019 Oct;32(5):715-721. doi: 10.1097/WCO.0000000000000743.
14 Thymidine kinase 2 mutations in autosomal recessive progressive external ophthalmoplegia with multiple mitochondrial DNA deletions. Hum Mol Genet. 2012 Jan 1;21(1):66-75. doi: 10.1093/hmg/ddr438. Epub 2011 Sep 21.
15 Identification and characterization of the novel m.8305C>T MTTK and m.4440G>A MTTM gene mutations causing mitochondrial myopathies.Neuromuscul Disord. 2018 Feb;28(2):137-143. doi: 10.1016/j.nmd.2017.10.006. Epub 2017 Oct 31.
16 Mitochondrial DNA depletion: mutations in thymidine kinase gene with myopathy and SMA.Neurology. 2002 Oct 22;59(8):1197-202. doi: 10.1212/01.wnl.0000028689.93049.9a.
17 Clinical spectrum of mitochondrial DNA depletion due to mutations in the thymidine kinase 2 gene.Arch Neurol. 2006 Aug;63(8):1122-6. doi: 10.1001/archneur.63.8.1122.
18 Impaired Adaptive Motor Learning Is Correlated With Cerebellar Hemispheric Gray Matter Atrophy in Spinocerebellar Ataxia Patients: A Voxel-Based Morphometry Study.Front Neurol. 2019 Nov 14;10:1183. doi: 10.3389/fneur.2019.01183. eCollection 2019.
19 A novel FGFR2 mutation in tyrosine kinase II domain, L617F, in Crouzon syndrome.J Cell Biochem. 2014 Jan;115(1):102-10. doi: 10.1002/jcb.24637.
20 CAG repeat RNA as an auxiliary toxic agent in polyglutamine disorders.RNA Biol. 2011 Jul-Aug;8(4):565-71. doi: 10.4161/rna.8.4.15397. Epub 2011 Jul 1.
21 Age-related metabolic changes limit efficacy of deoxynucleoside-based therapy in thymidine kinase 2-deficient mice.EBioMedicine. 2019 Aug;46:342-355. doi: 10.1016/j.ebiom.2019.07.042. Epub 2019 Jul 24.
22 Hearing loss in a patient with the myopathic form of mitochondrial DNA depletion syndrome and a novel mutation in the TK2 gene.Pediatr Res. 2010 Aug;68(2):151-4. doi: 10.1203/PDR.0b013e3181e33bbe.
23 "Drop attacks" as first clinical symptoms in a child carrying MTTK m.8344A>G mutation.Folia Neuropathol. 2013;51(4):347-54. doi: 10.5114/fn.2013.39726.
24 Late-onset thymidine kinase 2 deficiency: a review of 18 cases.Orphanet J Rare Dis. 2019 May 6;14(1):100. doi: 10.1186/s13023-019-1071-z.
25 Two novel mutations in thymidine kinase-2 cause early onset fatal encephalomyopathy and severe mtDNA depletion.Neuromuscul Disord. 2010 Mar;20(3):198-203. doi: 10.1016/j.nmd.2009.11.013. Epub 2010 Jan 18.
26 Human embryonic stem cell-derived test systems for developmental neurotoxicity: a transcriptomics approach. Arch Toxicol. 2013 Jan;87(1):123-43.
27 Gene expression analysis of precision-cut human liver slices indicates stable expression of ADME-Tox related genes. Toxicol Appl Pharmacol. 2011 May 15;253(1):57-69.
28 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
29 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
30 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
31 Drug-induced endoplasmic reticulum and oxidative stress responses independently sensitize toward TNF-mediated hepatotoxicity. Toxicol Sci. 2014 Jul;140(1):144-59. doi: 10.1093/toxsci/kfu072. Epub 2014 Apr 20.
32 Expression profiling of nucleotide metabolism-related genes in human breast cancer cells after treatment with 5-fluorouracil. Cancer Invest. 2009 Jun;27(5):561-7.
33 Keratinocyte-derived IL-36gama plays a role in hydroquinone-induced chemical leukoderma through inhibition of melanogenesis in human epidermal melanocytes. Arch Toxicol. 2019 Aug;93(8):2307-2320.
34 Arabinosylcytosine downregulates thymidine kinase and induces cross-resistance to zidovudine in T-lymphoid cells. Biochem Biophys Res Commun. 2003 Aug 1;307(3):564-8. doi: 10.1016/s0006-291x(03)01232-4.
35 Differential gene expression in human hepatocyte cell lines exposed to the antiretroviral agent zidovudine. Arch Toxicol. 2014 Mar;88(3):609-23. doi: 10.1007/s00204-013-1169-3. Epub 2013 Nov 30.
36 2', 3'-Dideoxycytidine represses thymidine kinases 1 and 2 expression in T-lymphoid cells. Life Sci. 2004 Jan 2;74(7):835-42. doi: 10.1016/j.lfs.2003.07.023.
37 Identification of a transcriptomic signature of food-relevant genotoxins in human HepaRG hepatocarcinoma cells. Food Chem Toxicol. 2020 Jun;140:111297. doi: 10.1016/j.fct.2020.111297. Epub 2020 Mar 28.
38 DNA methylome-wide alterations associated with estrogen receptor-dependent effects of bisphenols in breast cancer. Clin Epigenetics. 2019 Oct 10;11(1):138. doi: 10.1186/s13148-019-0725-y.
39 A transcriptome-based classifier to identify developmental toxicants by stem cell testing: design, validation and optimization for histone deacetylase inhibitors. Arch Toxicol. 2015 Sep;89(9):1599-618.
40 Gene expression profile analysis of gallic acid-induced cell death process. Sci Rep. 2021 Aug 18;11(1):16743. doi: 10.1038/s41598-021-96174-1.
41 Mechanisms of Chronic Fialuridine Hepatotoxicity as Revealed in Primary Human Hepatocyte Spheroids. Toxicol Sci. 2019 Oct 1;171(2):385-395. doi: 10.1093/toxsci/kfz195.