General Information of Drug Off-Target (DOT) (ID: OTFTNFHW)

DOT Name SOSS complex subunit B2 (NABP1)
Synonyms
Nucleic acid-binding protein 1; Oligonucleotide/oligosaccharide-binding fold-containing protein 2A; Sensor of single-strand DNA complex subunit B2; Sensor of ssDNA subunit B2; SOSS-B2; Single-stranded DNA-binding protein 2; hSSB2
Gene Name NABP1
Related Disease
Breast cancer ( )
Breast carcinoma ( )
Colorectal neoplasm ( )
Esophageal squamous cell carcinoma ( )
Neoplasm ( )
Promyelocytic leukaemia ( )
Laryngeal squamous cell carcinoma ( )
Hepatocellular carcinoma ( )
UniProt ID
SOSB2_HUMAN
3D Structure
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2D Sequence (FASTA)
Download
3D Structure (PDB)
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Pfam ID
PF21473
Sequence
MNRVNDPLIFIRDIKPGLKNLNVVFIVLEIGRVTKTKDGHEVRSCKVADKTGSITISVWD
EIGGLIQPGDIIRLTRGYASMWKGCLTLYTGRGGELQKIGEFCMVYSEVPNFSEPNPDYR
GQQNKGAQSEQKNNSMNSNMGTGTFGPVGNGVHTGPESREHQFSHAGRSNGRGLINPQLQ
GTASNQTVMTTISNGRDPRRAFKR
Function
Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. In the SOSS complex, acts as a sensor of single-stranded DNA that binds to single-stranded DNA, in particular to polypyrimidines. The SOSS complex associates with DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs) and ATM-dependent signaling pathways.
Reactome Pathway
RNA polymerase II transcribes snRNA genes (R-HSA-6807505 )

Molecular Interaction Atlas (MIA) of This DOT

8 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Breast cancer DIS7DPX1 Strong Biomarker [1]
Breast carcinoma DIS2UE88 Strong Biomarker [1]
Colorectal neoplasm DISR1UCN Strong Genetic Variation [2]
Esophageal squamous cell carcinoma DIS5N2GV Strong Posttranslational Modification [3]
Neoplasm DISZKGEW Strong Biomarker [4]
Promyelocytic leukaemia DISYGG13 Strong FusionGene [5]
Laryngeal squamous cell carcinoma DIS9UUVF moderate Genetic Variation [6]
Hepatocellular carcinoma DIS0J828 Limited Altered Expression [7]
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⏷ Show the Full List of 8 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
This DOT Affected the Drug Response of 1 Drug(s)
Drug Name Drug ID Highest Status Interaction REF
Fluorouracil DMUM7HZ Approved SOSS complex subunit B2 (NABP1) increases the Neutropenia ADR of Fluorouracil. [37]
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1 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the methylation of SOSS complex subunit B2 (NABP1). [8]
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30 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of SOSS complex subunit B2 (NABP1). [9]
Tretinoin DM49DUI Approved Tretinoin increases the expression of SOSS complex subunit B2 (NABP1). [10]
Acetaminophen DMUIE76 Approved Acetaminophen decreases the expression of SOSS complex subunit B2 (NABP1). [11]
Doxorubicin DMVP5YE Approved Doxorubicin decreases the expression of SOSS complex subunit B2 (NABP1). [12]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate increases the expression of SOSS complex subunit B2 (NABP1). [13]
Cisplatin DMRHGI9 Approved Cisplatin increases the expression of SOSS complex subunit B2 (NABP1). [14]
Estradiol DMUNTE3 Approved Estradiol affects the expression of SOSS complex subunit B2 (NABP1). [15]
Quercetin DM3NC4M Approved Quercetin increases the expression of SOSS complex subunit B2 (NABP1). [16]
Temozolomide DMKECZD Approved Temozolomide decreases the expression of SOSS complex subunit B2 (NABP1). [17]
Hydrogen peroxide DM1NG5W Approved Hydrogen peroxide affects the expression of SOSS complex subunit B2 (NABP1). [18]
Vorinostat DMWMPD4 Approved Vorinostat increases the expression of SOSS complex subunit B2 (NABP1). [19]
Testosterone DM7HUNW Approved Testosterone decreases the expression of SOSS complex subunit B2 (NABP1). [20]
Carbamazepine DMZOLBI Approved Carbamazepine affects the expression of SOSS complex subunit B2 (NABP1). [21]
Marinol DM70IK5 Approved Marinol decreases the expression of SOSS complex subunit B2 (NABP1). [22]
Menadione DMSJDTY Approved Menadione affects the expression of SOSS complex subunit B2 (NABP1). [18]
Panobinostat DM58WKG Approved Panobinostat increases the expression of SOSS complex subunit B2 (NABP1). [19]
Dexamethasone DMMWZET Approved Dexamethasone increases the expression of SOSS complex subunit B2 (NABP1). [23]
Demecolcine DMCZQGK Approved Demecolcine increases the expression of SOSS complex subunit B2 (NABP1). [24]
Bortezomib DMNO38U Approved Bortezomib increases the expression of SOSS complex subunit B2 (NABP1). [25]
Azathioprine DMMZSXQ Approved Azathioprine increases the expression of SOSS complex subunit B2 (NABP1). [26]
Indomethacin DMSC4A7 Approved Indomethacin increases the expression of SOSS complex subunit B2 (NABP1). [27]
SNDX-275 DMH7W9X Phase 3 SNDX-275 increases the expression of SOSS complex subunit B2 (NABP1). [28]
Resveratrol DM3RWXL Phase 3 Resveratrol increases the expression of SOSS complex subunit B2 (NABP1). [29]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene decreases the expression of SOSS complex subunit B2 (NABP1). [30]
Leflunomide DMR8ONJ Phase 1 Trial Leflunomide increases the expression of SOSS complex subunit B2 (NABP1). [31]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 increases the expression of SOSS complex subunit B2 (NABP1). [32]
Trichostatin A DM9C8NX Investigative Trichostatin A increases the expression of SOSS complex subunit B2 (NABP1). [33]
Formaldehyde DM7Q6M0 Investigative Formaldehyde decreases the expression of SOSS complex subunit B2 (NABP1). [34]
Acetaldehyde DMJFKG4 Investigative Acetaldehyde decreases the expression of SOSS complex subunit B2 (NABP1). [35]
Paraquat DMR8O3X Investigative Paraquat increases the expression of SOSS complex subunit B2 (NABP1). [36]
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⏷ Show the Full List of 30 Drug(s)

References

1 Antitumor effects of saikosaponin b2 on breast cancer cell proliferation and migration.Mol Med Rep. 2019 Aug;20(2):1943-1951. doi: 10.3892/mmr.2019.10385. Epub 2019 Jun 13.
2 Identification of Genetic Susceptibility Loci for Colorectal Tumors in a Genome-Wide Meta-analysis.Gastroenterology. 2013 Apr;144(4):799-807.e24. doi: 10.1053/j.gastro.2012.12.020. Epub 2012 Dec 22.
3 Cigarette smoke induces promoter methylation of single-stranded DNA-binding protein 2 in human esophageal squamous cell carcinoma.Int J Cancer. 2011 May 15;128(10):2261-73. doi: 10.1002/ijc.25569.
4 Crystal structure of the LUFS domain of human single-stranded DNA binding Protein 2 (SSBP2).Protein Sci. 2019 Apr;28(4):788-793. doi: 10.1002/pro.3581. Epub 2019 Feb 12.
5 OBFC2A/RARA: a novel fusion gene in variant acute promyelocytic leukemia.Blood. 2013 Feb 21;121(8):1432-5. doi: 10.1182/blood-2012-04-423129. Epub 2013 Jan 3.
6 DIRC3 and near NABP1 genetic polymorphisms are associated laryngeal squamous cell carcinoma patient survival.Oncotarget. 2016 Nov 29;7(48):79596-79604. doi: 10.18632/oncotarget.12865.
7 Single-stranded DNA binding protein 2 expression is associated with patient survival in hepatocellular carcinoma.BMC Cancer. 2018 Dec 12;18(1):1244. doi: 10.1186/s12885-018-5158-z.
8 Integrative omics data analyses of repeated dose toxicity of valproic acid in vitro reveal new mechanisms of steatosis induction. Toxicology. 2018 Jan 15;393:160-170.
9 Integrative "-Omics" analysis in primary human hepatocytes unravels persistent mechanisms of cyclosporine A-induced cholestasis. Chem Res Toxicol. 2016 Dec 19;29(12):2164-2174.
10 Transcriptional and Metabolic Dissection of ATRA-Induced Granulocytic Differentiation in NB4 Acute Promyelocytic Leukemia Cells. Cells. 2020 Nov 5;9(11):2423. doi: 10.3390/cells9112423.
11 Gene expression analysis of precision-cut human liver slices indicates stable expression of ADME-Tox related genes. Toxicol Appl Pharmacol. 2011 May 15;253(1):57-69.
12 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
13 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
14 Low doses of cisplatin induce gene alterations, cell cycle arrest, and apoptosis in human promyelocytic leukemia cells. Biomark Insights. 2016 Aug 24;11:113-21.
15 Identification of novel low-dose bisphenol a targets in human foreskin fibroblast cells derived from hypospadias patients. PLoS One. 2012;7(5):e36711. doi: 10.1371/journal.pone.0036711. Epub 2012 May 4.
16 Comparison of phenotypic and transcriptomic effects of false-positive genotoxins, true genotoxins and non-genotoxins using HepG2 cells. Mutagenesis. 2011 Sep;26(5):593-604.
17 Temozolomide induces activation of Wnt/-catenin signaling in glioma cells via PI3K/Akt pathway: implications in glioma therapy. Cell Biol Toxicol. 2020 Jun;36(3):273-278. doi: 10.1007/s10565-019-09502-7. Epub 2019 Nov 22.
18 Global gene expression analysis reveals differences in cellular responses to hydroxyl- and superoxide anion radical-induced oxidative stress in caco-2 cells. Toxicol Sci. 2010 Apr;114(2):193-203. doi: 10.1093/toxsci/kfp309. Epub 2009 Dec 31.
19 A transcriptome-based classifier to identify developmental toxicants by stem cell testing: design, validation and optimization for histone deacetylase inhibitors. Arch Toxicol. 2015 Sep;89(9):1599-618.
20 The exosome-like vesicles derived from androgen exposed-prostate stromal cells promote epithelial cells proliferation and epithelial-mesenchymal transition. Toxicol Appl Pharmacol. 2021 Jan 15;411:115384. doi: 10.1016/j.taap.2020.115384. Epub 2020 Dec 25.
21 Gene Expression Regulation and Pathway Analysis After Valproic Acid and Carbamazepine Exposure in a Human Embryonic Stem Cell-Based Neurodevelopmental Toxicity Assay. Toxicol Sci. 2015 Aug;146(2):311-20. doi: 10.1093/toxsci/kfv094. Epub 2015 May 15.
22 THC exposure of human iPSC neurons impacts genes associated with neuropsychiatric disorders. Transl Psychiatry. 2018 Apr 25;8(1):89. doi: 10.1038/s41398-018-0137-3.
23 Identification of mechanisms of action of bisphenol a-induced human preadipocyte differentiation by transcriptional profiling. Obesity (Silver Spring). 2014 Nov;22(11):2333-43.
24 Characterization of formaldehyde's genotoxic mode of action by gene expression analysis in TK6 cells. Arch Toxicol. 2013 Nov;87(11):1999-2012.
25 The proapoptotic effect of zoledronic acid is independent of either the bone microenvironment or the intrinsic resistance to bortezomib of myeloma cells and is enhanced by the combination with arsenic trioxide. Exp Hematol. 2011 Jan;39(1):55-65.
26 A transcriptomics-based in vitro assay for predicting chemical genotoxicity in vivo. Carcinogenesis. 2012 Jul;33(7):1421-9.
27 Evaluation of developmental toxicity using undifferentiated human embryonic stem cells. J Appl Toxicol. 2015 Feb;35(2):205-18.
28 Definition of transcriptome-based indices for quantitative characterization of chemically disturbed stem cell development: introduction of the STOP-Toxukn and STOP-Toxukk tests. Arch Toxicol. 2017 Feb;91(2):839-864.
29 Resveratrol inhibits pancreatic cancer cell proliferation through transcriptional induction of macrophage inhibitory cytokine-1. J Surg Res. 2007 Apr;138(2):163-9. doi: 10.1016/j.jss.2006.05.037. Epub 2007 Jan 25.
30 Transcriptional signature of human macrophages exposed to the environmental contaminant benzo(a)pyrene. Toxicol Sci. 2010 Apr;114(2):247-59.
31 Endoplasmic reticulum stress and MAPK signaling pathway activation underlie leflunomide-induced toxicity in HepG2 Cells. Toxicology. 2017 Dec 1;392:11-21.
32 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
33 From transient transcriptome responses to disturbed neurodevelopment: role of histone acetylation and methylation as epigenetic switch between reversible and irreversible drug effects. Arch Toxicol. 2014 Jul;88(7):1451-68.
34 Gene expression changes in primary human nasal epithelial cells exposed to formaldehyde in vitro. Toxicol Lett. 2010 Oct 5;198(2):289-95.
35 In vitro effects of aldehydes present in tobacco smoke on gene expression in human lung alveolar epithelial cells. Toxicol In Vitro. 2013 Apr;27(3):1072-81.
36 Paraquat modulates alternative pre-mRNA splicing by modifying the intracellular distribution of SRPK2. PLoS One. 2013 Apr 16;8(4):e61980. doi: 10.1371/journal.pone.0061980. Print 2013.
37 Genome-wide association study of chemotherapeutic agent-induced severe neutropenia/leucopenia for patients in Biobank Japan. Cancer Sci. 2013 Aug;104(8):1074-82. doi: 10.1111/cas.12186. Epub 2013 Jun 10.