General Information of Drug Off-Target (DOT) (ID: OTMG07H5)

DOT Name Protein patched homolog 1 (PTCH1)
Synonyms PTC; PTC1
Gene Name PTCH1
Related Disease
Basal cell neoplasm ( )
Basal cell nevus syndrome ( )
Hereditary hemochromatosis ( )
Holoprosencephaly 7 ( )
Rhabdomyosarcoma ( )
Advanced cancer ( )
Anterior segment dysgenesis 7 ( )
Anxiety ( )
Basal cell carcinoma ( )
Brachydactyly ( )
Brain neoplasm ( )
Breast carcinoma ( )
Epithelial ovarian cancer ( )
Gastrointestinal stromal tumour ( )
HIV infectious disease ( )
Isolated cleft palate ( )
Oculodentodigital dysplasia ( )
Ovarian cancer ( )
Pancreatic tumour ( )
Primitive neuroectodermal tumor ( )
Retinopathy ( )
Squamous cell carcinoma ( )
Subarachnoid hemorrhage ( )
Wilms tumor ( )
Asthma ( )
Brain cancer ( )
Isolated cleft lip ( )
Isolated congenital microcephaly ( )
Megalencephaly ( )
Melanocytic nevus ( )
Hereditary neoplastic syndrome ( )
Carcinoma ( )
Holoprosencephaly ( )
Rieger anomaly ( )
UniProt ID
PTC1_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
PDB ID
6DMB; 6DMO; 6DMY; 6E1H; 6N7G; 6N7H; 6N7K; 6OEU; 6OEV; 6RMG; 6RTW; 6RTX; 6RTY; 6RVC; 6RVD
Pfam ID
PF02460
Sequence
MASAGNAAEPQDRGGGGSGCIGAPGRPAGGGRRRRTGGLRRAAAPDRDYLHRPSYCDAAF
ALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAAN
LETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLD
SALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAK
LQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPA
DPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHAL
QTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVL
SFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALS
VAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGEC
LKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDL
YRREDRRLDIFCCFTSPCVSRVIQVEPQAYTDTHDNTRYSPPPPYSSHSFAHETQITMQS
TVQLRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSL
HCLEPPCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDI
VPRETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQL
PKMWLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDIS
QLTKQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETR
LRIPAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQ
YIGLRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSA
VPVVILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLML
AGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEP
PPSVVRFAMPPGHTHSGSDSSDSEYSSQTTVSGLSEELRHYEAQQGAGGPAHQVIVEATE
NPVFAHSTVVHPESRHHPPSNPRQQPHLDSGSLPPGRQGQQPRRDPPREGLWPPPYRPRR
DAFEISTEGHSGPSNRARWGPRGARSHNPRNPASTAMGSSVPGYCQPITTVTASASVTVA
VHPPPVPGPGRNPRGGLCPGYPETDHGLFEDPHVPFHVRCERRDSKVEVIELQDVECEER
PRGSSSN
Function
Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal. Seems to have a tumor suppressor function, as inactivation of this protein is probably a necessary, if not sufficient step for tumorigenesis.
Tissue Specificity In the adult, expressed in brain, lung, liver, heart, placenta, skeletal muscle, pancreas and kidney. Expressed in tumor cells but not in normal skin.
KEGG Pathway
cAMP sig.ling pathway (hsa04024 )
Hedgehog sig.ling pathway (hsa04340 )
Axon guidance (hsa04360 )
Pathways in cancer (hsa05200 )
Proteoglycans in cancer (hsa05205 )
Basal cell carcinoma (hsa05217 )
Reactome Pathway
Hedgehog 'off' state (R-HSA-5610787 )
Ligand-receptor interactions (R-HSA-5632681 )
Hedgehog 'on' state (R-HSA-5632684 )
Activation of SMO (R-HSA-5635838 )
Class B/2 (Secretin family receptors) (R-HSA-373080 )

Molecular Interaction Atlas (MIA) of This DOT

34 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Basal cell neoplasm DIS37IXW Definitive Biomarker [1]
Basal cell nevus syndrome DIST8BC2 Definitive Autosomal dominant [2]
Hereditary hemochromatosis DISVG5MT Definitive Genetic Variation [3]
Holoprosencephaly 7 DISU3FEX Definitive Autosomal dominant [4]
Rhabdomyosarcoma DISNR7MS Definitive Genetic Variation [5]
Advanced cancer DISAT1Z9 Strong Genetic Variation [6]
Anterior segment dysgenesis 7 DISP6CEE Strong Biomarker [7]
Anxiety DISIJDBA Strong Genetic Variation [8]
Basal cell carcinoma DIS7PYN3 Strong Genetic Variation [9]
Brachydactyly DIS2533F Strong Genetic Variation [10]
Brain neoplasm DISY3EKS Strong Altered Expression [11]
Breast carcinoma DIS2UE88 Strong Genetic Variation [12]
Epithelial ovarian cancer DIS56MH2 Strong Altered Expression [13]
Gastrointestinal stromal tumour DIS6TJYS Strong Biomarker [14]
HIV infectious disease DISO97HC Strong Biomarker [15]
Isolated cleft palate DISV80CD Strong Biomarker [16]
Oculodentodigital dysplasia DISSWR9C Strong GermlineCausalMutation [17]
Ovarian cancer DISZJHAP Strong Altered Expression [13]
Pancreatic tumour DIS3U0LK Strong Biomarker [18]
Primitive neuroectodermal tumor DISFHXHA Strong Biomarker [19]
Retinopathy DISB4B0F Strong Biomarker [20]
Squamous cell carcinoma DISQVIFL Strong Genetic Variation [21]
Subarachnoid hemorrhage DISI7I8Y Strong Biomarker [22]
Wilms tumor DISB6T16 Strong Genetic Variation [23]
Asthma DISW9QNS moderate Biomarker [24]
Brain cancer DISBKFB7 moderate Biomarker [25]
Isolated cleft lip DIS2O2JV moderate Genetic Variation [26]
Isolated congenital microcephaly DISUXHZ6 moderate Genetic Variation [27]
Megalencephaly DISYW5SV moderate Genetic Variation [28]
Melanocytic nevus DISYS32D moderate Genetic Variation [29]
Hereditary neoplastic syndrome DISGXLG5 Disputed CausalMutation [30]
Carcinoma DISH9F1N Limited Altered Expression [31]
Holoprosencephaly DISR35EC Limited Autosomal dominant [32]
Rieger anomaly DISNBLZ5 Limited Genetic Variation [7]
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⏷ Show the Full List of 34 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
21 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the expression of Protein patched homolog 1 (PTCH1). [33]
Cisplatin DMRHGI9 Approved Cisplatin decreases the expression of Protein patched homolog 1 (PTCH1). [34]
Estradiol DMUNTE3 Approved Estradiol increases the expression of Protein patched homolog 1 (PTCH1). [35]
Quercetin DM3NC4M Approved Quercetin decreases the expression of Protein patched homolog 1 (PTCH1). [37]
Arsenic trioxide DM61TA4 Approved Arsenic trioxide decreases the expression of Protein patched homolog 1 (PTCH1). [38]
Vorinostat DMWMPD4 Approved Vorinostat decreases the expression of Protein patched homolog 1 (PTCH1). [39]
Marinol DM70IK5 Approved Marinol increases the expression of Protein patched homolog 1 (PTCH1). [40]
Fluorouracil DMUM7HZ Approved Fluorouracil decreases the expression of Protein patched homolog 1 (PTCH1). [41]
Fulvestrant DM0YZC6 Approved Fulvestrant increases the expression of Protein patched homolog 1 (PTCH1). [35]
Azathioprine DMMZSXQ Approved Azathioprine affects the mutagenesis of Protein patched homolog 1 (PTCH1). [42]
Ethanol DMDRQZU Approved Ethanol increases the expression of Protein patched homolog 1 (PTCH1). [43]
Gemcitabine DMSE3I7 Approved Gemcitabine affects the expression of Protein patched homolog 1 (PTCH1). [44]
Vismodegib DM5IXKQ Approved Vismodegib decreases the expression of Protein patched homolog 1 (PTCH1). [45]
SNDX-275 DMH7W9X Phase 3 SNDX-275 decreases the expression of Protein patched homolog 1 (PTCH1). [46]
Resveratrol DM3RWXL Phase 3 Resveratrol increases the expression of Protein patched homolog 1 (PTCH1). [47]
APR-246 DMNFADH Phase 2 APR-246 decreases the expression of Protein patched homolog 1 (PTCH1). [48]
(+)-JQ1 DM1CZSJ Phase 1 (+)-JQ1 decreases the expression of Protein patched homolog 1 (PTCH1). [50]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 increases the expression of Protein patched homolog 1 (PTCH1). [51]
Trichostatin A DM9C8NX Investigative Trichostatin A decreases the expression of Protein patched homolog 1 (PTCH1). [52]
Formaldehyde DM7Q6M0 Investigative Formaldehyde decreases the expression of Protein patched homolog 1 (PTCH1). [53]
CYCLOPAMINE DMEM2SW Investigative CYCLOPAMINE decreases the expression of Protein patched homolog 1 (PTCH1). [54]
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⏷ Show the Full List of 21 Drug(s)
2 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Arsenic DMTL2Y1 Approved Arsenic affects the methylation of Protein patched homolog 1 (PTCH1). [36]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene decreases the methylation of Protein patched homolog 1 (PTCH1). [49]
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References

1 Ultraviolet and ionizing radiation enhance the growth of BCCs and trichoblastomas in patched heterozygous knockout mice.Nat Med. 1999 Nov;5(11):1285-91. doi: 10.1038/15242.
2 Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020 Feb;22(2):245-257. doi: 10.1038/s41436-019-0686-8. Epub 2019 Nov 6.
3 Expression profile of sonic hedgehog signaling-related molecules in basal cell carcinoma.PLoS One. 2019 Nov 22;14(11):e0225511. doi: 10.1371/journal.pone.0225511. eCollection 2019.
4 PTCH mutations in four Brazilian patients with holoprosencephaly and in one with holoprosencephaly-like features and normal MRI. Am J Med Genet A. 2006 Dec 1;140(23):2584-6. doi: 10.1002/ajmg.a.31369.
5 Non-canonical Hedgehog Signaling Pathway in Cancer: Activation of GLI Transcription Factors Beyond Smoothened.Front Genet. 2019 Jun 12;10:556. doi: 10.3389/fgene.2019.00556. eCollection 2019.
6 Aggressive variants of papillary thyroid microcarcinoma are associated with high-risk features, but not decreased survival.Surgery. 2020 Jan;167(1):19-27. doi: 10.1016/j.surg.2019.03.030. Epub 2019 Oct 16.
7 Targeted resequencing identifies PTCH1 as a major contributor to ocular developmental anomalies and extends the SOX2 regulatory network.Genome Res. 2016 Apr;26(4):474-85. doi: 10.1101/gr.196048.115. Epub 2016 Feb 18.
8 Meta-analysis of genome-wide association studies for neuroticism in 449,484 individuals identifies novel genetic loci and pathways.Nat Genet. 2018 Jul;50(7):920-927. doi: 10.1038/s41588-018-0151-7. Epub 2018 Jun 25.
9 PTCH1 and SMO gene alterations in keratocystic odontogenic tumors.J Dent Res. 2008 Jun;87(6):575-9. doi: 10.1177/154405910808700616.
10 A girl with deletion 9q22.1-q22.32 including the PTCH and ROR2 genes identified by genome-wide array-CGH.Am J Med Genet A. 2007 Aug 15;143A(16):1885-9. doi: 10.1002/ajmg.a.31845.
11 A rapid and sensitive protocol for competitive reverse transcriptase (cRT) PCR analysis of cellular genes.Brain Pathol. 1998 Jan;8(1):13-8. doi: 10.1111/j.1750-3639.1998.tb00129.x.
12 Mutation of the PTCH1 gene predicts recurrence of breast cancer.Sci Rep. 2019 Nov 8;9(1):16359. doi: 10.1038/s41598-019-52617-4.
13 The Effect of PTCH1 on Ovarian Cancer Cell Proliferation and Apoptosis.Cancer Biother Radiopharm. 2019 Mar;34(2):103-109. doi: 10.1089/cbr.2018.2626. Epub 2018 Dec 6.
14 Hedgehog pathway dysregulation contributes to the pathogenesis of human gastrointestinal stromal tumors via GLI-mediated activation of KIT expression. Oncotarget. 2016 Nov 29;7(48):78226-78241. doi: 10.18632/oncotarget.12909.
15 Anti-HIV activity of olive leaf extract (OLE) and modulation of host cell gene expression by HIV-1 infection and OLE treatment.Biochem Biophys Res Commun. 2003 Aug 8;307(4):1029-37. doi: 10.1016/s0006-291x(03)01292-0.
16 Contributions of PTCH gene variants to isolated cleft lip and palate.Cleft Palate Craniofac J. 2006 Jan;43(1):21-9. doi: 10.1597/04-169r.1.
17 Nevoid basal cell carcinoma syndrome (Gorlin syndrome).Orphanet J Rare Dis. 2008 Nov 25;3:32. doi: 10.1186/1750-1172-3-32.
18 Combination of hedgehog signaling blockage and chemotherapy leads to tumor reduction in pancreatic adenocarcinomas.Pancreas. 2012 Mar;41(2):222-9. doi: 10.1097/MPA.0b013e31822896dd.
19 Protective role of 17 -estradiol on medulloblastoma development in Patched 1 heterozygous mice.Int J Cancer. 2010 Dec 15;127(12):2749-57. doi: 10.1002/ijc.25293.
20 Functional rescue of REP1 following treatment with PTC124 and novel derivative PTC-414 in human choroideremia fibroblasts and the nonsense-mediated zebrafish model.Hum Mol Genet. 2016 Aug 15;25(16):3416-3431. doi: 10.1093/hmg/ddw184. Epub 2016 Jun 21.
21 Genetic Mutations Underlying Phenotypic Plasticity in Basosquamous Carcinoma.J Invest Dermatol. 2019 Nov;139(11):2263-2271.e5. doi: 10.1016/j.jid.2019.03.1163. Epub 2019 Jun 15.
22 The role of the sonic hedgehog signaling pathway in early brain injury after experimental subarachnoid hemorrhage in rats.Neurosci Lett. 2013 Sep 27;552:81-6. doi: 10.1016/j.neulet.2013.07.042. Epub 2013 Aug 7.
23 Wilms Tumor Associated With the 9q22.3 Microdeletion Syndrome: 2 New Case Reports and a Review of The Literature.J Pediatr Hematol Oncol. 2019 Nov;41(8):e517-e520. doi: 10.1097/MPH.0000000000001322.
24 Importance of hedgehog interacting protein and other lung function genes in asthma.J Allergy Clin Immunol. 2011 Jun;127(6):1457-65. doi: 10.1016/j.jaci.2011.01.056. Epub 2011 Mar 12.
25 Missense mutations in SMOH in sporadic basal cell carcinomas of the skin and primitive neuroectodermal tumors of the central nervous system.Cancer Res. 1998 May 1;58(9):1798-803.
26 A novel PTCH1 mutation underlies nonsyndromic cleft lip and/or palate in a Han Chinese family.Oral Dis. 2018 Oct;24(7):1318-1325. doi: 10.1111/odi.12915. Epub 2018 Jul 9.
27 PTCH1 duplication in a family with microcephaly and mild developmental delay.Eur J Hum Genet. 2009 Feb;17(2):267-71. doi: 10.1038/ejhg.2008.176. Epub 2008 Oct 1.
28 Co-occurrence of mutations in FOXP1 and PTCH1 in a girl with extreme megalencephaly, callosal dysgenesis and profound intellectual disability.J Hum Genet. 2018 Nov;63(11):1189-1193. doi: 10.1038/s10038-018-0508-x. Epub 2018 Sep 4.
29 The sebaceous nevus: a nevus with deletions of the PTCH gene.Cancer Res. 1999 Apr 15;59(8):1834-6.
30 Manifestations of Gorlin-Goltz syndrome.Dan Med J. 2014 May;61(5):A4829.
31 Aberrant expression of Sonic hedgehog signaling in Peutz-Jeghers syndrome.Hum Pathol. 2016 Apr;50:153-61. doi: 10.1016/j.humpath.2015.09.044. Epub 2015 Dec 29.
32 Mutations in PATCHED-1, the receptor for SONIC HEDGEHOG, are associated with holoprosencephaly. Hum Genet. 2002 Apr;110(4):297-301. doi: 10.1007/s00439-002-0695-5. Epub 2002 Mar 2.
33 Human embryonic stem cell-derived test systems for developmental neurotoxicity: a transcriptomics approach. Arch Toxicol. 2013 Jan;87(1):123-43.
34 Activation of AIFM2 enhances apoptosis of human lung cancer cells undergoing toxicological stress. Toxicol Lett. 2016 Sep 6;258:227-236.
35 Arsenite and cadmium promote the development of mammary tumors. Carcinogenesis. 2020 Jul 14;41(7):1005-1014. doi: 10.1093/carcin/bgz176.
36 Prenatal arsenic exposure and the epigenome: identifying sites of 5-methylcytosine alterations that predict functional changes in gene expression in newborn cord blood and subsequent birth outcomes. Toxicol Sci. 2015 Jan;143(1):97-106. doi: 10.1093/toxsci/kfu210. Epub 2014 Oct 10.
37 Comparison of phenotypic and transcriptomic effects of false-positive genotoxins, true genotoxins and non-genotoxins using HepG2 cells. Mutagenesis. 2011 Sep;26(5):593-604.
38 Arsenic trioxide prevents osteosarcoma growth by inhibition of GLI transcription via DNA damage accumulation. PLoS One. 2013 Jul 8;8(7):e69466. doi: 10.1371/journal.pone.0069466. Print 2013.
39 Combined targeting of histone deacetylases and hedgehog signaling enhances cytoxicity in pancreatic cancer. Cancer Biol Ther. 2009 Jul;8(14):1328-39. doi: 10.4161/cbt.8.14.8633. Epub 2009 Jul 6.
40 THC exposure of human iPSC neurons impacts genes associated with neuropsychiatric disorders. Transl Psychiatry. 2018 Apr 25;8(1):89. doi: 10.1038/s41398-018-0137-3.
41 Down-regulation of Sonic hedgehog signaling pathway activity is involved in 5-fluorouracil-induced apoptosis and motility inhibition in Hep3B cells. Acta Biochim Biophys Sin (Shanghai). 2008 Sep;40(9):819-29.
42 PTCH mutations in basal cell carcinomas from azathioprine-treated organ transplant recipients. Br J Cancer. 2008 Oct 21;99(8):1276-84. doi: 10.1038/sj.bjc.6604665.
43 Chronic ethanol exposure increases goosecoid (GSC) expression in human embryonic carcinoma cell differentiation. J Appl Toxicol. 2014 Jan;34(1):66-75.
44 A fine-needle aspirate-based vulnerability assay identifies polo-like kinase 1 as a mediator of gemcitabine resistance in pancreatic cancer. Mol Cancer Ther. 2010 Feb;9(2):311-8. doi: 10.1158/1535-7163.MCT-09-0693. Epub 2010 Jan 26.
45 Hedgehog signaling antagonist GDC-0449 (Vismodegib) inhibits pancreatic cancer stem cell characteristics: molecular mechanisms. PLoS One. 2011;6(11):e27306. doi: 10.1371/journal.pone.0027306. Epub 2011 Nov 8.
46 A transcriptome-based classifier to identify developmental toxicants by stem cell testing: design, validation and optimization for histone deacetylase inhibitors. Arch Toxicol. 2015 Sep;89(9):1599-618.
47 Differential regulation of proliferation, cell cycle control and gene expression in cultured human aortic and pulmonary artery endothelial cells by resveratrol. Int J Mol Med. 2010 Nov;26(5):743-9.
48 Mutant p53 reactivation by PRIMA-1MET induces multiple signaling pathways converging on apoptosis. Oncogene. 2010 Mar 4;29(9):1329-38. doi: 10.1038/onc.2009.425. Epub 2009 Nov 30.
49 Air pollution and DNA methylation alterations in lung cancer: A systematic and comparative study. Oncotarget. 2017 Jan 3;8(1):1369-1391. doi: 10.18632/oncotarget.13622.
50 CCAT1 is an enhancer-templated RNA that predicts BET sensitivity in colorectal cancer. J Clin Invest. 2016 Feb;126(2):639-52.
51 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
52 Epigenetic changes and disturbed neural development in a human embryonic stem cell-based model relating to the fetal valproate syndrome. Hum Mol Genet. 2012 Sep 15;21(18):4104-14. doi: 10.1093/hmg/dds239. Epub 2012 Jun 20.
53 Gene expression changes in primary human nasal epithelial cells exposed to formaldehyde in vitro. Toxicol Lett. 2010 Oct 5;198(2):289-95.
54 Mono-2-ethyhexyl phthalate advancing the progression of prostate cancer through activating the hedgehog pathway in LNCaP cells. Toxicol In Vitro. 2016 Apr;32:86-91. doi: 10.1016/j.tiv.2015.12.012. Epub 2015 Dec 19.