General Information of Drug Off-Target (DOT) (ID: OT24UORN)

DOT Name NCK-interacting protein with SH3 domain (NCKIPSD)
Synonyms
54 kDa VacA-interacting protein; 54 kDa vimentin-interacting protein; VIP54; 90 kDa SH3 protein interacting with Nck; AF3p21; Dia-interacting protein 1; DIP-1; Diaphanous protein-interacting protein; SH3 adapter protein SPIN90; WASP-interacting SH3-domain protein; WISH; Wiskott-Aldrich syndrome protein-interacting protein
Gene Name NCKIPSD
Related Disease
Bladder transitional cell carcinoma ( )
Cervical cancer ( )
Cervical carcinoma ( )
Adult T-cell leukemia/lymphoma ( )
Angioimmunoblastic T-cell Lymphoma ( )
Anorexia nervosa cachexia ( )
Autosomal dominant familial periodic fever ( )
Breast cancer ( )
Breast carcinoma ( )
Classic Hodgkin lymphoma ( )
Colorectal carcinoma ( )
Fibrosarcoma ( )
Gastroenteritis ( )
Glioblastoma multiforme ( )
Hepatitis ( )
Hepatitis A virus infection ( )
Hepatitis C virus infection ( )
Hepatitis E virus infection ( )
Hepatocellular carcinoma ( )
Herpes simplex infection ( )
Huntington disease ( )
Leukemia ( )
Neoplasm ( )
Progressive multifocal leukoencephalopathy ( )
Rheumatoid arthritis ( )
Systemic lupus erythematosus ( )
T-cell leukaemia ( )
Tuberculosis ( )
Ulcerative colitis ( )
Wiskott-Aldrich syndrome ( )
Advanced cancer ( )
Human T-lymphotropic virus 1 infectious disease ( )
Spastic paralysis ( )
Childhood kidney Wilms tumor ( )
Wilms tumor ( )
UniProt ID
SPN90_HUMAN
3D Structure
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2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
PDB ID
6DEC; 6DED; 6DEE
Pfam ID
PF00018 ; PF09431
Sequence
MYRALYAFRSAEPNALAFAAGETFLVLERSSAHWWLAARARSGETGYVPPAYLRRLQGLE
QDVLQAIDRAIEAVHNTAMRDGGKYSLEQRGVLQKLIHHRKETLSRRGPSASSVAVMTSS
TSDHHLDAAAARQPNGVCRAGFERQHSLPSSEHLGADGGLYQIPLPSSQIPPQPRRAAPT
TPPPPVKRRDREALMASGSGGHNTMPSGGNSVSSGSSVSSTSLDTLYTSSSPSEPGSSCS
PTPPPVPRRGTHTTVSQVQPPPSKASAPEPPAEEEVATGTTSASDDLEALGTLSLGTTEE
KAAAEAAVPRTIGAELMELVRRNTGLSHELCRVAIGIIVGHIQASVPASSPVMEQVLLSL
VEGKDLSMALPSGQVCHDQQRLEVIFADLARRKDDAQQRSWALYEDEGVIRCYLEELLHI
LTDADPEVCKKMCKRNEFESVLALVAYYQMEHRASLRLLLLKCFGAMCSLDAAIISTLVS
SVLPVELARDMQTDTQDHQKLCYSALILAMVFSMGEAVPYAHYEHLGTPFAQFLLNIVED
GLPLDTTEQLPDLCVNLLLALNLHLPAADQNVIMAALSKHANVKIFSEKLLLLLNRGDDP
VRIFKHEPQPPHSVLKFLQDVFGSPATAAIFYHTDMMALIDITVRHIADLSPGDKLRMEY
LSLMHAIVRTTPYLQHRHRLPDLQAILRRILNEEETSPQCQMDRMIVREMCKEFLVLGEA
PS
Function
Has an important role in stress fiber formation induced by active diaphanous protein homolog 1 (DRF1). Induces microspike formation, in vivo. In vitro, stimulates N-WASP-induced ARP2/3 complex activation in the absence of CDC42. May play an important role in the maintenance of sarcomeres and/or in the assembly of myofibrils into sarcomeres. Implicated in regulation of actin polymerization and cell adhesion. Plays a role in angiogenesis.
Tissue Specificity Highest expression in heart, brain, skeletal muscle, kidney and liver. Lower levels in placenta, lung, small intestine and leukocytes. Weak expression in colon, thymus and spleen.
Reactome Pathway
RHO GTPases Activate WASPs and WAVEs (R-HSA-5663213 )
FCGR3A-mediated phagocytosis (R-HSA-9664422 )
Regulation of actin dynamics for phagocytic cup formation (R-HSA-2029482 )

Molecular Interaction Atlas (MIA) of This DOT

35 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Bladder transitional cell carcinoma DISNL46A Definitive Biomarker [1]
Cervical cancer DISFSHPF Definitive Biomarker [2]
Cervical carcinoma DIST4S00 Definitive Biomarker [2]
Adult T-cell leukemia/lymphoma DIS882XU Strong Biomarker [3]
Angioimmunoblastic T-cell Lymphoma DISZPFTL Strong Biomarker [4]
Anorexia nervosa cachexia DISFO5RQ Strong Genetic Variation [5]
Autosomal dominant familial periodic fever DISCRNV1 Strong Genetic Variation [6]
Breast cancer DIS7DPX1 Strong Biomarker [7]
Breast carcinoma DIS2UE88 Strong Biomarker [7]
Classic Hodgkin lymphoma DISV1LU6 Strong Genetic Variation [8]
Colorectal carcinoma DIS5PYL0 Strong Biomarker [9]
Fibrosarcoma DISWX7MU Strong Biomarker [4]
Gastroenteritis DISXQCG5 Strong Biomarker [10]
Glioblastoma multiforme DISK8246 Strong Biomarker [4]
Hepatitis DISXXX35 Strong Biomarker [11]
Hepatitis A virus infection DISUMFQV Strong Biomarker [11]
Hepatitis C virus infection DISQ0M8R Strong Genetic Variation [12]
Hepatitis E virus infection DIS0TXIR Strong Biomarker [13]
Hepatocellular carcinoma DIS0J828 Strong Biomarker [14]
Herpes simplex infection DISL1SAV Strong Biomarker [15]
Huntington disease DISQPLA4 Strong Genetic Variation [8]
Leukemia DISNAKFL Strong Biomarker [3]
Neoplasm DISZKGEW Strong Biomarker [16]
Progressive multifocal leukoencephalopathy DISX02WS Strong Altered Expression [17]
Rheumatoid arthritis DISTSB4J Strong Biomarker [18]
Systemic lupus erythematosus DISI1SZ7 Strong Biomarker [18]
T-cell leukaemia DISJ6YIF Strong Biomarker [19]
Tuberculosis DIS2YIMD Strong Biomarker [20]
Ulcerative colitis DIS8K27O Strong Biomarker [21]
Wiskott-Aldrich syndrome DISATMDB Strong Biomarker [22]
Advanced cancer DISAT1Z9 moderate Altered Expression [7]
Human T-lymphotropic virus 1 infectious disease DISN5C4M moderate Genetic Variation [23]
Spastic paralysis DISVQ6I2 Disputed Genetic Variation [23]
Childhood kidney Wilms tumor DIS0NMK3 Limited Biomarker [24]
Wilms tumor DISB6T16 Limited Biomarker [24]
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⏷ Show the Full List of 35 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
8 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of NCK-interacting protein with SH3 domain (NCKIPSD). [25]
Doxorubicin DMVP5YE Approved Doxorubicin decreases the expression of NCK-interacting protein with SH3 domain (NCKIPSD). [26]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of NCK-interacting protein with SH3 domain (NCKIPSD). [27]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of NCK-interacting protein with SH3 domain (NCKIPSD). [28]
Quercetin DM3NC4M Approved Quercetin increases the expression of NCK-interacting protein with SH3 domain (NCKIPSD). [29]
Arsenic trioxide DM61TA4 Approved Arsenic trioxide decreases the expression of NCK-interacting protein with SH3 domain (NCKIPSD). [30]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene increases the expression of NCK-interacting protein with SH3 domain (NCKIPSD). [31]
Bisphenol A DM2ZLD7 Investigative Bisphenol A increases the expression of NCK-interacting protein with SH3 domain (NCKIPSD). [33]
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⏷ Show the Full List of 8 Drug(s)
1 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
PMID28870136-Compound-52 DMFDERP Patented PMID28870136-Compound-52 decreases the phosphorylation of NCK-interacting protein with SH3 domain (NCKIPSD). [32]
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References

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3 Palmitoylation and p8-mediated human T-cell leukemia virus type 1 transmission.J Virol. 2014 Feb;88(4):2319-22. doi: 10.1128/JVI.03444-13. Epub 2013 Nov 27.
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5 Genome-wide association study identifies eight risk loci and implicates metabo-psychiatric origins for anorexia nervosa.Nat Genet. 2019 Aug;51(8):1207-1214. doi: 10.1038/s41588-019-0439-2. Epub 2019 Jul 15.
6 Hepatitis E virus from India exhibits significant amino acid mutations in fulminant hepatic failure patients.Virus Genes. 2013 Feb;46(1):47-53. doi: 10.1007/s11262-012-0833-7. Epub 2012 Oct 10.
7 Extra domain A-containing fibronectin expression in Spin90-deficient fibroblasts mediates cancer-stroma interaction and promotes breast cancer progression.J Cell Physiol. 2020 May;235(5):4494-4507. doi: 10.1002/jcp.29326. Epub 2019 Oct 21.
8 TT virus infection and genotype distribution in blood donors and a group of patients from Turkey.Infection. 2002 Oct;30(5):299-302. doi: 10.1007/s15010-002-2185-z.
9 Long interspersed nucleotide acid element-1 ORF-1 protein promotes proliferation and invasion of human colorectal cancer LoVo cells through enhancing ETS-1 activity.Genet Mol Res. 2014 Apr 14;13(3):6981-94. doi: 10.4238/2014.April.14.13.
10 Recombinant norovirus implicated in gastroenteritis outbreaks in Hiroshima Prefecture, Japan.J Med Virol. 2008 May;80(5):921-8. doi: 10.1002/jmv.21151.
11 Transfusion-transmitted virus co-infection in other types of hepatitis and its genotypes.Hepatobiliary Pancreat Dis Int. 2003 Feb;2(1):90-3.
12 Etiological role of hepatitis E virus in sporadic fulminant hepatitis.J Med Virol. 1994 Feb;42(2):133-7. doi: 10.1002/jmv.1890420207.
13 First Crystal Structure of a Nonstructural Hepatitis E Viral Protein Identifies a Putative Novel Zinc-Binding Protein.J Virol. 2019 Jun 14;93(13):e00170-19. doi: 10.1128/JVI.00170-19. Print 2019 Jul 1.
14 Long interspersed nuclear element ORF-1 protein promotes proliferation and resistance to chemotherapy in hepatocellular carcinoma.World J Gastroenterol. 2013 Feb 21;19(7):1068-78. doi: 10.3748/wjg.v19.i7.1068.
15 Equine herpesvirus type 4 UL56 and UL49.5 proteins downregulate cell surface major histocompatibility complex class I expression independently of each other.J Virol. 2012 Aug;86(15):8059-71. doi: 10.1128/JVI.00891-12. Epub 2012 May 23.
16 SPIN90 Depletion and Microtubule Acetylation Mediate Stromal Fibroblast Activation in Breast Cancer Progression.Cancer Res. 2017 Sep 1;77(17):4710-4722. doi: 10.1158/0008-5472.CAN-17-0657. Epub 2017 Jun 26.
17 Discovery and characterization of novel trans-spliced products of human polyoma JC virus late transcripts from PML patients.J Cell Physiol. 2018 May;233(5):4137-4155. doi: 10.1002/jcp.26219. Epub 2017 Dec 18.
18 Functional assay of type I interferon in systemic lupus erythematosus plasma and association with anti-RNA binding protein autoantibodies.Arthritis Rheum. 2006 Jun;54(6):1906-16. doi: 10.1002/art.21890.
19 Simian T cell leukemia virus type I from naturally infected feral monkeys from central and west Africa encodes a 91-amino acid p12 (ORF-I) protein as opposed to a 99-amino acid protein encoded by HTLV type I from humans.AIDS Res Hum Retroviruses. 1997 Mar 20;13(5):425-32. doi: 10.1089/aid.1997.13.425.
20 Identification of 9-oxo-1,2,3,4,5,6,10,19-octanor-13,17-secoandrost-8(14)-ene-7,17-dioic acid as a metabolite of steroid degradation in Comamonas testosteroni TA441 and the genes involved in the conversion.J Steroid Biochem Mol Biol. 2019 Jan;185:268-276. doi: 10.1016/j.jsbmb.2018.07.009. Epub 2018 Jul 17.
21 miRNA-26b Overexpression in Ulcerative Colitis-associated Carcinogenesis.Inflamm Bowel Dis. 2015 Sep;21(9):2039-51. doi: 10.1097/MIB.0000000000000453.
22 Single-Turnover Activation of Arp2/3 Complex by Dip1 May Balance Nucleation of Linear versus Branched Actin Filaments.Curr Biol. 2019 Oct 7;29(19):3331-3338.e7. doi: 10.1016/j.cub.2019.08.023. Epub 2019 Sep 26.
23 Analyses of HTLV-1 sequences suggest interaction between ORF-I mutations and HAM/TSP outcome.Infect Genet Evol. 2016 Nov;45:420-425. doi: 10.1016/j.meegid.2016.08.020. Epub 2016 Aug 21.
24 Multiple imprinted and stemness genes provide a link between normal and tumor progenitor cells of the developing human kidney.Cancer Res. 2006 Jun 15;66(12):6040-9. doi: 10.1158/0008-5472.CAN-05-4528.
25 Comparison of HepG2 and HepaRG by whole-genome gene expression analysis for the purpose of chemical hazard identification. Toxicol Sci. 2010 May;115(1):66-79.
26 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
27 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
28 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
29 Comparison of phenotypic and transcriptomic effects of false-positive genotoxins, true genotoxins and non-genotoxins using HepG2 cells. Mutagenesis. 2011 Sep;26(5):593-604.
30 Gene expression profile induced by arsenic trioxide in chronic lymphocytic leukemia cells reveals a central role for heme oxygenase-1 in apoptosis and regulation of matrix metalloproteinase-9. Oncotarget. 2016 Dec 13;7(50):83359-83377.
31 Identification of a transcriptomic signature of food-relevant genotoxins in human HepaRG hepatocarcinoma cells. Food Chem Toxicol. 2020 Jun;140:111297. doi: 10.1016/j.fct.2020.111297. Epub 2020 Mar 28.
32 Quantitative phosphoproteomics reveal cellular responses from caffeine, coumarin and quercetin in treated HepG2 cells. Toxicol Appl Pharmacol. 2022 Aug 15;449:116110. doi: 10.1016/j.taap.2022.116110. Epub 2022 Jun 7.
33 Characterization of the Molecular Alterations Induced by the Prolonged Exposure of Normal Colon Mucosa and Colon Cancer Cells to Low-Dose Bisphenol A. Int J Mol Sci. 2022 Oct 1;23(19):11620. doi: 10.3390/ijms231911620.