General Information of Drug Off-Target (DOT) (ID: OTVY53VG)

DOT Name DNA replication factor Cdt1 (CDT1)
Synonyms Double parked homolog; DUP
Gene Name CDT1
Related Disease
B-cell neoplasm ( )
Hepatocellular carcinoma ( )
Meier-Gorlin syndrome 4 ( )
Advanced cancer ( )
Breast cancer ( )
Breast carcinoma ( )
Breast neoplasm ( )
Campylobacteriosis ( )
Chromosomal disorder ( )
Isolated growth hormone deficiency type IA ( )
Lymphoblastic lymphoma ( )
Mantle cell lymphoma ( )
Myeloproliferative neoplasm ( )
Pelizeaus-Merzbacher spectrum disorder ( )
Prostate carcinoma ( )
Retinoblastoma ( )
Seckel syndrome ( )
Syndromic X-linked intellectual disability Lubs type ( )
Meier-Gorlin syndrome ( )
Melanoma ( )
Neoplasm ( )
Psychotic disorder ( )
Pulmonary emphysema ( )
UniProt ID
CDT1_HUMAN
3D Structure
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2D Sequence (FASTA)
Download
3D Structure (PDB)
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PDB ID
2LE8; 2WVR; 6QCG
Pfam ID
PF08839 ; PF16679
Sequence
MEQRRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRKRARPPAAPGRD
QARPPARRRLRLSVDEVSSPSTPEAPDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTI
SELASCLQRARELGARVRALKASAQDAGESCTPEAEGRPEEPCGEKAPAYQRFHALAQPG
LPGLVLPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEECNVGQIK
TVYPASYRFRQERSVPTFKDGTRRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQ
KLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEPAALPQPPATEKLTTA
QEVLARARNLISPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSALKGVSQ
DLLERIRAKEAQKQLAQMTRCPEQEQRLQRLERLPELARVLRSVFVSERKPALSMEVACA
RMVGSCCTIMSPGEMEKHLLLLSELLPDWLSLHRIRTDTYVKLDKAADLAHITARLAHQT
RAEEGL
Function
Required for both DNA replication and mitosis. DNA replication licensing factor, required for pre-replication complex assembly. Cooperates with CDC6 and the origin recognition complex (ORC) during G1 phase of the cell cycle to promote the loading of the mini-chromosome maintenance (MCM) complex onto DNA to generate pre-replication complexes (pre-RC). Required also for mitosis by promoting stable kinetochore-microtubule attachments. Potential oncogene.
KEGG Pathway
Cell cycle (hsa04110 )
Reactome Pathway
Orc1 removal from chromatin (R-HSA-68949 )
Activation of the pre-replicative complex (R-HSA-68962 )
Switching of origins to a post-replicative state (R-HSA-69052 )
G1/S-Specific Transcription (R-HSA-69205 )
Assembly of the pre-replicative complex (R-HSA-68867 )

Molecular Interaction Atlas (MIA) of This DOT

23 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
B-cell neoplasm DISVY326 Definitive Genetic Variation [1]
Hepatocellular carcinoma DIS0J828 Definitive Biomarker [2]
Meier-Gorlin syndrome 4 DIS8W3JZ Definitive Autosomal recessive [3]
Advanced cancer DISAT1Z9 Strong Biomarker [4]
Breast cancer DIS7DPX1 Strong Altered Expression [5]
Breast carcinoma DIS2UE88 Strong Altered Expression [5]
Breast neoplasm DISNGJLM Strong Genetic Variation [6]
Campylobacteriosis DISF18CN Strong Biomarker [7]
Chromosomal disorder DISM5BB5 Strong Biomarker [8]
Isolated growth hormone deficiency type IA DISLPIAM Strong Genetic Variation [9]
Lymphoblastic lymphoma DISB9ZYC Strong Biomarker [8]
Mantle cell lymphoma DISFREOV Strong Altered Expression [10]
Myeloproliferative neoplasm DIS5KAPA Strong Biomarker [11]
Pelizeaus-Merzbacher spectrum disorder DIS1ODJO Strong Genetic Variation [12]
Prostate carcinoma DISMJPLE Strong Biomarker [13]
Retinoblastoma DISVPNPB Strong Biomarker [14]
Seckel syndrome DISEVUBA Strong Biomarker [11]
Syndromic X-linked intellectual disability Lubs type DISJ54F6 Strong Genetic Variation [12]
Meier-Gorlin syndrome DISCFIU3 Supportive Autosomal dominant [15]
Melanoma DIS1RRCY Limited Biomarker [16]
Neoplasm DISZKGEW Limited Biomarker [17]
Psychotic disorder DIS4UQOT Limited Biomarker [18]
Pulmonary emphysema DIS5M7HZ Limited Genetic Variation [19]
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⏷ Show the Full List of 23 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
4 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate increases the methylation of DNA replication factor Cdt1 (CDT1). [20]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene increases the methylation of DNA replication factor Cdt1 (CDT1). [41]
TAK-243 DM4GKV2 Phase 1 TAK-243 increases the sumoylation of DNA replication factor Cdt1 (CDT1). [42]
PMID28870136-Compound-52 DMFDERP Patented PMID28870136-Compound-52 increases the phosphorylation of DNA replication factor Cdt1 (CDT1). [44]
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28 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of DNA replication factor Cdt1 (CDT1). [21]
Tretinoin DM49DUI Approved Tretinoin decreases the expression of DNA replication factor Cdt1 (CDT1). [22]
Acetaminophen DMUIE76 Approved Acetaminophen increases the expression of DNA replication factor Cdt1 (CDT1). [23]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of DNA replication factor Cdt1 (CDT1). [24]
Cisplatin DMRHGI9 Approved Cisplatin increases the expression of DNA replication factor Cdt1 (CDT1). [25]
Estradiol DMUNTE3 Approved Estradiol increases the expression of DNA replication factor Cdt1 (CDT1). [26]
Quercetin DM3NC4M Approved Quercetin increases the expression of DNA replication factor Cdt1 (CDT1). [27]
Calcitriol DM8ZVJ7 Approved Calcitriol decreases the expression of DNA replication factor Cdt1 (CDT1). [28]
Testosterone DM7HUNW Approved Testosterone decreases the expression of DNA replication factor Cdt1 (CDT1). [28]
Triclosan DMZUR4N Approved Triclosan decreases the expression of DNA replication factor Cdt1 (CDT1). [29]
Carbamazepine DMZOLBI Approved Carbamazepine affects the expression of DNA replication factor Cdt1 (CDT1). [30]
Zoledronate DMIXC7G Approved Zoledronate decreases the expression of DNA replication factor Cdt1 (CDT1). [31]
Phenobarbital DMXZOCG Approved Phenobarbital affects the expression of DNA replication factor Cdt1 (CDT1). [32]
Menadione DMSJDTY Approved Menadione affects the expression of DNA replication factor Cdt1 (CDT1). [33]
Demecolcine DMCZQGK Approved Demecolcine decreases the expression of DNA replication factor Cdt1 (CDT1). [34]
Cannabidiol DM0659E Approved Cannabidiol decreases the expression of DNA replication factor Cdt1 (CDT1). [35]
Bortezomib DMNO38U Approved Bortezomib decreases the expression of DNA replication factor Cdt1 (CDT1). [36]
Troglitazone DM3VFPD Approved Troglitazone decreases the expression of DNA replication factor Cdt1 (CDT1). [37]
Diclofenac DMPIHLS Approved Diclofenac affects the expression of DNA replication factor Cdt1 (CDT1). [30]
Simvastatin DM30SGU Approved Simvastatin decreases the expression of DNA replication factor Cdt1 (CDT1). [38]
Palbociclib DMD7L94 Approved Palbociclib decreases the expression of DNA replication factor Cdt1 (CDT1). [39]
Genistein DM0JETC Phase 2/3 Genistein increases the expression of DNA replication factor Cdt1 (CDT1). [26]
PEITC DMOMN31 Phase 2 PEITC decreases the expression of DNA replication factor Cdt1 (CDT1). [40]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 decreases the expression of DNA replication factor Cdt1 (CDT1). [43]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the expression of DNA replication factor Cdt1 (CDT1). [45]
Coumestrol DM40TBU Investigative Coumestrol increases the expression of DNA replication factor Cdt1 (CDT1). [46]
Deguelin DMXT7WG Investigative Deguelin increases the expression of DNA replication factor Cdt1 (CDT1). [47]
geraniol DMS3CBD Investigative geraniol decreases the expression of DNA replication factor Cdt1 (CDT1). [48]
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⏷ Show the Full List of 28 Drug(s)

References

1 Comparative genome profiling across subtypes of low-grade B-cell lymphoma identifies type-specific and common aberrations that target genes with a role in B-cell neoplasia.Haematologica. 2008 May;93(5):670-9. doi: 10.3324/haematol.12221. Epub 2008 Mar 26.
2 Computational discovery of niclosamide ethanolamine, a repurposed drug candidate that reduces growth of hepatocellular carcinoma cells initro and in mice by inhibiting cell division cycle 37 signaling. Gastroenterology. 2017 Jun;152(8):2022-2036.
3 Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020 Feb;22(2):245-257. doi: 10.1038/s41436-019-0686-8. Epub 2019 Nov 6.
4 Cdt1 and Geminin in cancer: markers or triggers of malignant transformation?.Front Biosci. 2008 May 1;13:4485-94. doi: 10.2741/3018.
5 The prognostic significance of Cdc6 and Cdt1 in breast cancer.Sci Rep. 2017 Apr 20;7(1):985. doi: 10.1038/s41598-017-00998-9.
6 The association of polymorphisms of CDT1 and GMNN gene with the risk of breast cancer in Chinese women: a case-control analysis.Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2006 Oct;23(5):544-7.
7 Similarity of Campylobacter coli from pigs, poultry and man.Int J Environ Health Res. 2009 Dec;19(6):445-52. doi: 10.1080/09603120903254041.
8 Cdt1 transgenic mice develop lymphoblastic lymphoma in the absence of p53.Oncogene. 2005 Dec 8;24(55):8176-86. doi: 10.1038/sj.onc.1208881.
9 Cdt1 variants reveal unanticipated aspects of interactions with cyclin/CDK and MCM important for normal genome replication.Mol Biol Cell. 2018 Dec 1;29(25):2989-3002. doi: 10.1091/mbc.E18-04-0242. Epub 2018 Oct 3.
10 Unbalanced expression of licensing DNA replication factors occurs in a subset of mantle cell lymphomas with genomic instability.Int J Cancer. 2006 Dec 15;119(12):2768-74. doi: 10.1002/ijc.22146.
11 Mutations in the pre-replication complex cause Meier-Gorlin syndrome. Nat Genet. 2011 Feb 27;43(4):356-9. doi: 10.1038/ng.775.
12 Complex genomic rearrangements at the PLP1 locus include triplication and quadruplication.PLoS Genet. 2015 Mar 6;11(3):e1005050. doi: 10.1371/journal.pgen.1005050. eCollection 2015 Mar.
13 Challenges in optimizing a prostate carcinoma binding peptide, identified through the phage display technology.Molecules. 2011 Feb 14;16(2):1559-78. doi: 10.3390/molecules16021559.
14 TGF1 Cell Cycle Arrest Is Mediated by Inhibition of MCM Assembly in Rb-Deficient Conditions.Mol Cancer Res. 2019 Jan;17(1):277-288. doi: 10.1158/1541-7786.MCR-18-0558. Epub 2018 Sep 26.
15 Deficiency in origin licensing proteins impairs cilia formation: implications for the aetiology of Meier-Gorlin syndrome. PLoS Genet. 2013;9(3):e1003360. doi: 10.1371/journal.pgen.1003360. Epub 2013 Mar 14.
16 The protein phosphatase 2A regulatory subunit PR70 is a gonosomal melanoma tumor suppressor gene.Sci Transl Med. 2016 Dec 14;8(369):369ra177. doi: 10.1126/scitranslmed.aai9188.
17 Targeting the protein ubiquitination machinery in melanoma by the NEDD8-activating enzyme inhibitor pevonedistat (MLN4924).Invest New Drugs. 2017 Feb;35(1):11-25. doi: 10.1007/s10637-016-0398-8. Epub 2016 Oct 25.
18 Early interventions in a US military FIRST episode psychosis program.Early Interv Psychiatry. 2018 Dec;12(6):1243-1249. doi: 10.1111/eip.12709. Epub 2018 Jul 3.
19 Meier-Gorlin syndrome genotype-phenotype studies: 35 individuals with pre-replication complex gene mutations and 10 without molecular diagnosis.Eur J Hum Genet. 2012 Jun;20(6):598-606. doi: 10.1038/ejhg.2011.269. Epub 2012 Feb 15.
20 Integrative omics data analyses of repeated dose toxicity of valproic acid in vitro reveal new mechanisms of steatosis induction. Toxicology. 2018 Jan 15;393:160-170.
21 Comparison of HepG2 and HepaRG by whole-genome gene expression analysis for the purpose of chemical hazard identification. Toxicol Sci. 2010 May;115(1):66-79.
22 Effect of retinoic acid on gene expression in human conjunctival epithelium: secretory phospholipase A2 mediates retinoic acid induction of MUC16. Invest Ophthalmol Vis Sci. 2005 Nov;46(11):4050-61.
23 Predictive toxicology using systemic biology and liver microfluidic "on chip" approaches: application to acetaminophen injury. Toxicol Appl Pharmacol. 2012 Mar 15;259(3):270-80.
24 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
25 Low doses of cisplatin induce gene alterations, cell cycle arrest, and apoptosis in human promyelocytic leukemia cells. Biomark Insights. 2016 Aug 24;11:113-21.
26 Convergent transcriptional profiles induced by endogenous estrogen and distinct xenoestrogens in breast cancer cells. Carcinogenesis. 2006 Aug;27(8):1567-78.
27 Comparison of phenotypic and transcriptomic effects of false-positive genotoxins, true genotoxins and non-genotoxins using HepG2 cells. Mutagenesis. 2011 Sep;26(5):593-604.
28 Effects of 1alpha,25 dihydroxyvitamin D3 and testosterone on miRNA and mRNA expression in LNCaP cells. Mol Cancer. 2011 May 18;10:58.
29 Transcriptome and DNA methylome dynamics during triclosan-induced cardiomyocyte differentiation toxicity. Stem Cells Int. 2018 Oct 29;2018:8608327.
30 Drug-induced endoplasmic reticulum and oxidative stress responses independently sensitize toward TNF-mediated hepatotoxicity. Toxicol Sci. 2014 Jul;140(1):144-59. doi: 10.1093/toxsci/kfu072. Epub 2014 Apr 20.
31 Interleukin-19 as a translational indicator of renal injury. Arch Toxicol. 2015 Jan;89(1):101-6.
32 Reproducible chemical-induced changes in gene expression profiles in human hepatoma HepaRG cells under various experimental conditions. Toxicol In Vitro. 2009 Apr;23(3):466-75. doi: 10.1016/j.tiv.2008.12.018. Epub 2008 Dec 30.
33 Global gene expression analysis reveals differences in cellular responses to hydroxyl- and superoxide anion radical-induced oxidative stress in caco-2 cells. Toxicol Sci. 2010 Apr;114(2):193-203. doi: 10.1093/toxsci/kfp309. Epub 2009 Dec 31.
34 Characterization of formaldehyde's genotoxic mode of action by gene expression analysis in TK6 cells. Arch Toxicol. 2013 Nov;87(11):1999-2012.
35 Cannabidiol enhances cytotoxicity of anti-cancer drugs in human head and neck squamous cell carcinoma. Sci Rep. 2020 Nov 26;10(1):20622. doi: 10.1038/s41598-020-77674-y.
36 Bortezomib induces caspase-dependent apoptosis in Hodgkin lymphoma cell lines and is associated with reduced c-FLIP expression: a gene expression profiling study with implications for potential combination therapies. Leuk Res. 2008 Feb;32(2):275-85. doi: 10.1016/j.leukres.2007.05.024. Epub 2007 Jul 19.
37 Effects of ciglitazone and troglitazone on the proliferation of human stomach cancer cells. World J Gastroenterol. 2009 Jan 21;15(3):310-20.
38 Simvastatin inactivates beta1-integrin and extracellular signal-related kinase signaling and inhibits cell proliferation in head and neck squamous cell carcinoma cells. Cancer Sci. 2007 Jun;98(6):890-9.
39 Cdk4/6 inhibition induces epithelial-mesenchymal transition and enhances invasiveness in pancreatic cancer cells. Mol Cancer Ther. 2012 Oct;11(10):2138-48. doi: 10.1158/1535-7163.MCT-12-0562. Epub 2012 Aug 6.
40 Phenethyl isothiocyanate alters the gene expression and the levels of protein associated with cell cycle regulation in human glioblastoma GBM 8401 cells. Environ Toxicol. 2017 Jan;32(1):176-187.
41 Air pollution and DNA methylation alterations in lung cancer: A systematic and comparative study. Oncotarget. 2017 Jan 3;8(1):1369-1391. doi: 10.18632/oncotarget.13622.
42 Inhibiting ubiquitination causes an accumulation of SUMOylated newly synthesized nuclear proteins at PML bodies. J Biol Chem. 2019 Oct 18;294(42):15218-15234. doi: 10.1074/jbc.RA119.009147. Epub 2019 Jul 8.
43 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
44 Quantitative phosphoproteomics reveal cellular responses from caffeine, coumarin and quercetin in treated HepG2 cells. Toxicol Appl Pharmacol. 2022 Aug 15;449:116110. doi: 10.1016/j.taap.2022.116110. Epub 2022 Jun 7.
45 Bisphenol A induces DSB-ATM-p53 signaling leading to cell cycle arrest, senescence, autophagy, stress response, and estrogen release in human fetal lung fibroblasts. Arch Toxicol. 2018 Apr;92(4):1453-1469.
46 Pleiotropic combinatorial transcriptomes of human breast cancer cells exposed to mixtures of dietary phytoestrogens. Food Chem Toxicol. 2009 Apr;47(4):787-95.
47 Neurotoxicity and underlying cellular changes of 21 mitochondrial respiratory chain inhibitors. Arch Toxicol. 2021 Feb;95(2):591-615. doi: 10.1007/s00204-020-02970-5. Epub 2021 Jan 29.
48 Geraniol suppresses prostate cancer growth through down-regulation of E2F8. Cancer Med. 2016 Oct;5(10):2899-2908.