General Information of Drug Off-Target (DOT) (ID: OT4DQ8F2)

DOT Name Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1)
Synonyms RAB3 GTPase-activating protein 130 kDa subunit; Rab3-GAP p130; Rab3-GAP
Gene Name RAB3GAP1
Related Disease
Advanced cancer ( )
Retinoblastoma ( )
Warburg micro syndrome ( )
Warburg micro syndrome 1 ( )
Alzheimer disease ( )
Breast carcinoma ( )
Carcinoma ( )
Cardiomyopathy ( )
Colorectal carcinoma ( )
Hepatocellular carcinoma ( )
Herpes simplex infection ( )
Hypogonadism ( )
Intellectual disability ( )
Keratoconus ( )
Lung adenocarcinoma ( )
Multiple sclerosis ( )
Neoplasm ( )
Non-insulin dependent diabetes ( )
Peripheral neuropathy ( )
Precancerous condition ( )
Schizophrenia ( )
Small-cell lung cancer ( )
Squamous cell carcinoma ( )
Acute myelogenous leukaemia ( )
Cataract ( )
Martsolf syndrome ( )
Obsolete cataract-intellectual disability-hypogonadism syndrome ( )
Prostate cancer ( )
Prostate carcinoma ( )
Axonal neuropathy ( )
Epithelial ovarian cancer ( )
Melanoma ( )
Nervous system disease ( )
Ovarian cancer ( )
UniProt ID
RB3GP_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
Pfam ID
PF19533 ; PF13890
Sequence
MAADSEPESEVFEITDFTTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIFTSGTWEE
KSDEISFADFKFSVTHHYLVQESTDKEGKDELLEDVVPQSMQDLLGMNNDFPPRAHCLVR
WYGLREFVVIAPAAHSDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRRMYVGE
CQGPGVRTDFEMVHLRKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFTYVLQDWQ
QYFWPQQPPDIDALVGGEVGGLEFGKLPFGACEDPISELHLATTWPHLTEGIIVDNDVYS
DLDPIQAPHWSVRVRKAENPQCLLGDFVTEFFKICRRKESTDEILGRSAFEEEGKETADI
THALSKLTEPASVPIHKLSVSNMVHTAKKKIRKHRGVEESPLNNDVLNTILLFLFPDAVS
EKPLDGTTSTDNNNPPSESEDYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHL
WQEFVLEMRFRWENNFLIPGLASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSASD
VTNIYPGDAGKAGDQLVPDNLKETDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGNGQ
ESGKKGGPKEMANLRPEGRLYQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAK
LGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEEVIDEKGNVV
LKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHL
LPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPEDKKLEEIIHQITNVE
ALIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLVTGAGRGHAGRIIHKLFVN
AQRAAAMTPPEEELKRMGSPEERRQNSVSDFPPPAGREFILRTTVPRPAPYSKALPQRMY
SVLTKEDFRLAGAFSSDTSFF
Function
Catalytic subunit of the Rab3 GTPase-activating (Rab3GAP) complex composed of RAB3GAP1 and RAB3GAP2, which has GTPase-activating protein (GAP) activity towards various Rab3 subfamily members (RAB3A, RAB3B, RAB3C and RAB3D), RAB5A and RAB43, and guanine nucleotide exchange factor (GEF) activity towards RAB18. As part of the Rab3GAP complex, acts as a GAP for Rab3 proteins by converting active RAB3-GTP to the inactive form RAB3-GDP. Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. The Rab3GAP complex, acts as a GEF for RAB18 by promoting the conversion of inactive RAB18-GDP to the active form RAB18-GTP. Required for recruiting and activating RAB18 at the endoplasmic reticulum (ER) membrane where it maintains proper ER structure. Required for normal eye and brain development. May participate in neurodevelopmental processes such as proliferation, migration and differentiation before synapse formation, and non-synaptic vesicular release of neurotransmitters.
Tissue Specificity Ubiquitous.
Reactome Pathway
RAB GEFs exchange GTP for GDP on RABs (R-HSA-8876198 )
COPI-independent Golgi-to-ER retrograde traffic (R-HSA-6811436 )

Molecular Interaction Atlas (MIA) of This DOT

34 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Advanced cancer DISAT1Z9 Definitive Biomarker [1]
Retinoblastoma DISVPNPB Definitive Altered Expression [2]
Warburg micro syndrome DISSEZ2V Definitive Autosomal recessive [3]
Warburg micro syndrome 1 DIS90EI2 Definitive Autosomal recessive [4]
Alzheimer disease DISF8S70 Strong Biomarker [5]
Breast carcinoma DIS2UE88 Strong Biomarker [6]
Carcinoma DISH9F1N Strong Biomarker [7]
Cardiomyopathy DISUPZRG Strong Genetic Variation [8]
Colorectal carcinoma DIS5PYL0 Strong Posttranslational Modification [9]
Hepatocellular carcinoma DIS0J828 Strong Biomarker [10]
Herpes simplex infection DISL1SAV Strong Biomarker [11]
Hypogonadism DISICMNI Strong Biomarker [12]
Intellectual disability DISMBNXP Strong Genetic Variation [13]
Keratoconus DISOONXH Strong Genetic Variation [14]
Lung adenocarcinoma DISD51WR Strong Biomarker [15]
Multiple sclerosis DISB2WZI Strong Genetic Variation [16]
Neoplasm DISZKGEW Strong Biomarker [17]
Non-insulin dependent diabetes DISK1O5Z Strong Genetic Variation [18]
Peripheral neuropathy DIS7KN5G Strong Genetic Variation [8]
Precancerous condition DISV06FL Strong Altered Expression [2]
Schizophrenia DISSRV2N Strong Biomarker [19]
Small-cell lung cancer DISK3LZD Strong Biomarker [20]
Squamous cell carcinoma DISQVIFL Strong Altered Expression [7]
Acute myelogenous leukaemia DISCSPTN moderate Genetic Variation [21]
Cataract DISUD7SL moderate Genetic Variation [22]
Martsolf syndrome DISF77WN moderate GermlineCausalMutation [23]
Obsolete cataract-intellectual disability-hypogonadism syndrome DISBWVTW Supportive Autosomal recessive [23]
Prostate cancer DISF190Y Disputed Biomarker [24]
Prostate carcinoma DISMJPLE Disputed Biomarker [24]
Axonal neuropathy DIS5S2BC Limited Genetic Variation [25]
Epithelial ovarian cancer DIS56MH2 Limited Biomarker [26]
Melanoma DIS1RRCY Limited Genetic Variation [27]
Nervous system disease DISJ7GGT Limited Biomarker [18]
Ovarian cancer DISZJHAP Limited Biomarker [26]
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⏷ Show the Full List of 34 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
8 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Tretinoin DM49DUI Approved Tretinoin decreases the expression of Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1). [28]
Doxorubicin DMVP5YE Approved Doxorubicin increases the expression of Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1). [29]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate increases the expression of Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1). [30]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1). [31]
Menadione DMSJDTY Approved Menadione affects the expression of Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1). [32]
Tamibarotene DM3G74J Phase 3 Tamibarotene decreases the expression of Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1). [28]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the expression of Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1). [34]
KOJIC ACID DMP84CS Investigative KOJIC ACID increases the expression of Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1). [35]
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⏷ Show the Full List of 8 Drug(s)
1 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
PMID28870136-Compound-52 DMFDERP Patented PMID28870136-Compound-52 decreases the phosphorylation of Rab3 GTPase-activating protein catalytic subunit (RAB3GAP1). [33]
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References

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2 Developmental stage-specific proliferation and retinoblastoma genesis in RB-deficient human but not mouse cone precursors.Proc Natl Acad Sci U S A. 2018 Oct 2;115(40):E9391-E9400. doi: 10.1073/pnas.1808903115. Epub 2018 Sep 13.
3 Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020 Feb;22(2):245-257. doi: 10.1038/s41436-019-0686-8. Epub 2019 Nov 6.
4 Novel RAB3GAP1 Mutations Causing Warburg Micro Syndrome in Two Italian Sisters. J Pediatr Neurosci. 2017 Oct-Dec;12(4):360-362. doi: 10.4103/jpn.JPN_45_17.
5 Increased expression of p130 in Alzheimer disease.Neurochem Res. 2007 Apr-May;32(4-5):639-44. doi: 10.1007/s11064-006-9146-3. Epub 2006 Sep 28.
6 Expression of Rb2/p130 in breast and endometrial cancer: correlations with hormone receptor status.Br J Cancer. 2001 Aug 17;85(4):546-51. doi: 10.1054/bjoc.2001.1923.
7 Immunohistochemical investigation of new suppressor oncogene p130 in oral squamous cell carcinoma.Oral Oncol. 1999 May;35(3):321-5. doi: 10.1016/s1368-8375(98)00089-x.
8 Warburg micro syndrome type 1 associated with peripheral neuropathy and cardiomyopathy.Folia Neuropathol. 2016;54(3):273-281. doi: 10.5114/fn.2016.62537.
9 Identification and functional characterization of p130Cas as a substrate of protein tyrosine phosphatase nonreceptor 14.Oncogene. 2013 Apr 18;32(16):2087-95. doi: 10.1038/onc.2012.220. Epub 2012 Jun 18.
10 The degradation of cell cycle regulators by SKP2/CKS1 ubiquitin ligase is genetically controlled in rodent liver cancer and contributes to determine the susceptibility to the disease.Int J Cancer. 2010 Mar 1;126(5):1275-81. doi: 10.1002/ijc.24650.
11 The human cytomegalovirus glycoprotein B gene (ORF UL55) is expressed early in the infectious cycle.J Gen Virol. 1997 Aug;78 ( Pt 8):1981-92. doi: 10.1099/0022-1317-78-8-1981.
12 Gene screening facilitates diagnosis of complicated symptoms: A case report.Mol Med Rep. 2017 Dec;16(6):7915-7922. doi: 10.3892/mmr.2017.7590. Epub 2017 Sep 22.
13 Analysis on the emerging role of Rab3 GTPase-activating protein in Warburg Micro and Martsolf syndrome.Methods Enzymol. 2008;438:131-9. doi: 10.1016/S0076-6879(07)38009-9.
14 Evaluating the Association between Keratoconus and Reported Genetic Loci in a Han Chinese Population.Ophthalmic Genet. 2015 Jun;36(2):132-6. doi: 10.3109/13816810.2015.1005317. Epub 2015 Feb 12.
15 Reduced angiomotin p130 expression correlates with poor prognosis in lung adenocarcinoma.J Clin Pathol. 2017 Jul;70(7):625-630. doi: 10.1136/jclinpath-2016-204071. Epub 2016 Dec 15.
16 Revealing the functions of novel mutations in RAB3GAP1 in Martsolf and Warburg micro syndromes.Am J Med Genet A. 2019 Apr;179(4):579-587. doi: 10.1002/ajmg.a.61065. Epub 2019 Feb 7.
17 Ablating all three retinoblastoma family members in mouse lung leads to neuroendocrine tumor formation.Oncotarget. 2017 Jan 17;8(3):4373-4386. doi: 10.18632/oncotarget.13875.
18 Genome-wide association study for type 2 diabetes in Indians identifies a new susceptibility locus at 2q21.Diabetes. 2013 Mar;62(3):977-86. doi: 10.2337/db12-0406. Epub 2012 Dec 3.
19 Proteomics in Schizophrenia: A Gateway to Discover Potential Biomarkers of Psychoneuroimmune Pathways.Front Psychiatry. 2019 Nov 29;10:885. doi: 10.3389/fpsyt.2019.00885. eCollection 2019.
20 Loss of p130 accelerates tumor development in a mouse model for human small-cell lung carcinoma.Cancer Res. 2010 May 15;70(10):3877-83. doi: 10.1158/0008-5472.CAN-09-4228. Epub 2010 Apr 20.
21 Genome-wide haplotype association study identify the FGFR2 gene as a risk gene for acute myeloid leukemia.Oncotarget. 2017 Jan 31;8(5):7891-7899. doi: 10.18632/oncotarget.13631.
22 Loss-of-function mutations in TBC1D20 cause cataracts and male infertility in blind sterile mice and Warburg micro syndrome in humans. Am J Hum Genet. 2013 Dec 5;93(6):1001-14. doi: 10.1016/j.ajhg.2013.10.011. Epub 2013 Nov 14.
23 Mutation spectrum in RAB3GAP1, RAB3GAP2, and RAB18 and genotype-phenotype correlations in warburg micro syndrome and Martsolf syndrome. Hum Mutat. 2013 May;34(5):686-96. doi: 10.1002/humu.22296.
24 Microbubble-assisted p53, RB, and p130 gene transfer in combination with radiation therapy in prostate cancer.Curr Gene Ther. 2013 Jun 1;13(3):163-74. doi: 10.2174/1566523211313030001.
25 Neuronal vacuolation and spinocerebellar degeneration associated with altered neurotransmission.Folia Neuropathol. 2017;55(2):132-145. doi: 10.5114/fn.2017.68580.
26 miR-106a represses the Rb tumor suppressor p130 to regulate cellular proliferation and differentiation in high-grade serous ovarian carcinoma.Mol Cancer Res. 2013 Nov;11(11):1314-25. doi: 10.1158/1541-7786.MCR-13-0131. Epub 2013 Sep 17.
27 Melanocyte transformation requires complete loss of all pocket protein function via a mechanism that mitigates the need for MAPK pathway activation.Oncogene. 2017 Jun 29;36(26):3789-3795. doi: 10.1038/onc.2016.511. Epub 2017 Feb 13.
28 Differential modulation of PI3-kinase/Akt pathway during all-trans retinoic acid- and Am80-induced HL-60 cell differentiation revealed by DNA microarray analysis. Biochem Pharmacol. 2004 Dec 1;68(11):2177-86.
29 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
30 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
31 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
32 Global gene expression analysis reveals differences in cellular responses to hydroxyl- and superoxide anion radical-induced oxidative stress in caco-2 cells. Toxicol Sci. 2010 Apr;114(2):193-203. doi: 10.1093/toxsci/kfp309. Epub 2009 Dec 31.
33 Quantitative phosphoproteomics reveal cellular responses from caffeine, coumarin and quercetin in treated HepG2 cells. Toxicol Appl Pharmacol. 2022 Aug 15;449:116110. doi: 10.1016/j.taap.2022.116110. Epub 2022 Jun 7.
34 Identification of mechanisms of action of bisphenol a-induced human preadipocyte differentiation by transcriptional profiling. Obesity (Silver Spring). 2014 Nov;22(11):2333-43.
35 Toxicogenomics of kojic acid on gene expression profiling of a375 human malignant melanoma cells. Biol Pharm Bull. 2006 Apr;29(4):655-69.