General Information of Drug Off-Target (DOT) (ID: OTPL0AI1)

DOT Name DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C)
Synonyms A3C; EC 3.5.4.38; APOBEC1-like; Phorbolin I
Gene Name APOBEC3C
Related Disease
Asthma ( )
Anxiety ( )
Bloom syndrome ( )
Burkitt lymphoma ( )
Depression ( )
Hepatitis B virus infection ( )
Immunodeficiency ( )
Leukemia ( )
Psychotic disorder ( )
Skin disease ( )
Zika virus infection ( )
Rheumatoid arthritis ( )
Advanced cancer ( )
Anxiety disorder ( )
Invasive ductal breast carcinoma ( )
UniProt ID
ABC3C_HUMAN
3D Structure
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2D Sequence (FASTA)
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3D Structure (PDB)
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PDB ID
3VM8; 3VOW
EC Number
3.5.4.38
Pfam ID
PF18782
Sequence
MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD
SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT
ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL
LKRRLRESLQ
Function
DNA deaminase (cytidine deaminase) which acts as an inhibitor of retrovirus replication and retrotransposon mobility via deaminase-dependent and -independent mechanisms. After the penetration of retroviral nucleocapsids into target cells of infection and the initiation of reverse transcription, it can induce the conversion of cytosine to uracil in the minus-sense single-strand viral DNA, leading to G-to-A hypermutations in the subsequent plus-strand viral DNA. The resultant detrimental levels of mutations in the proviral genome, along with a deamination-independent mechanism that works prior to the proviral integration, together exert efficient antiretroviral effects in infected target cells. Selectively targets single-stranded DNA and does not deaminate double-stranded DNA or single- or double-stranded RNA. Exhibits antiviral activity against simian immunodeficiency virus (SIV), hepatitis B virus (HBV), herpes simplex virus 1 (HHV-1) and Epstein-Barr virus (EBV) and may inhibit the mobility of LTR and non-LTR retrotransposons. May also play a role in the epigenetic regulation of gene expression through the process of active DNA demethylation.
Tissue Specificity Expressed in spleen, testes, peripherical blood lymphocytes, heart, thymus, prostate and ovary.
KEGG Pathway
Viral life cycle - HIV-1 (hsa03250 )
Human immunodeficiency virus 1 infection (hsa05170 )
Reactome Pathway
Formation of the Editosome (R-HSA-75094 )
mRNA Editing (R-HSA-72200 )

Molecular Interaction Atlas (MIA) of This DOT

15 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Asthma DISW9QNS Definitive Biomarker [1]
Anxiety DISIJDBA Strong Genetic Variation [2]
Bloom syndrome DISKXQ7J Strong Genetic Variation [3]
Burkitt lymphoma DIS9D5XU Strong Genetic Variation [3]
Depression DIS3XJ69 Strong Genetic Variation [2]
Hepatitis B virus infection DISLQ2XY Strong Genetic Variation [4]
Immunodeficiency DIS093I0 Strong Genetic Variation [5]
Leukemia DISNAKFL Strong Biomarker [6]
Psychotic disorder DIS4UQOT Strong Biomarker [7]
Skin disease DISDW8R6 Strong Biomarker [8]
Zika virus infection DISQUCTY Strong Biomarker [9]
Rheumatoid arthritis DISTSB4J moderate Biomarker [10]
Advanced cancer DISAT1Z9 Limited Biomarker [11]
Anxiety disorder DISBI2BT Limited Genetic Variation [12]
Invasive ductal breast carcinoma DIS43J58 Limited Genetic Variation [13]
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⏷ Show the Full List of 15 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
This DOT Affected the Drug Response of 7 Drug(s)
Drug Name Drug ID Highest Status Interaction REF
Doxorubicin DMVP5YE Approved DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C) affects the response to substance of Doxorubicin. [33]
Etoposide DMNH3PG Approved DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C) affects the response to substance of Etoposide. [33]
Paclitaxel DMLB81S Approved DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C) affects the response to substance of Paclitaxel. [33]
Mitomycin DMH0ZJE Approved DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C) affects the response to substance of Mitomycin. [33]
Topotecan DMP6G8T Approved DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C) affects the response to substance of Topotecan. [33]
Mitoxantrone DMM39BF Approved DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C) affects the response to substance of Mitoxantrone. [33]
Vinblastine DM5TVS3 Approved DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C) affects the response to substance of Vinblastine. [33]
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⏷ Show the Full List of 7 Drug(s)
20 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate affects the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [14]
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [15]
Tretinoin DM49DUI Approved Tretinoin increases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [16]
Acetaminophen DMUIE76 Approved Acetaminophen decreases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [17]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [18]
Cisplatin DMRHGI9 Approved Cisplatin increases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [19]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [20]
Testosterone DM7HUNW Approved Testosterone decreases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [21]
Marinol DM70IK5 Approved Marinol increases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [22]
Fluorouracil DMUM7HZ Approved Fluorouracil increases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [23]
Demecolcine DMCZQGK Approved Demecolcine increases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [24]
Testosterone enanthate DMB6871 Approved Testosterone enanthate affects the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [25]
Artesunate DMR27C8 Approved Artesunate increases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [26]
Urethane DM7NSI0 Phase 4 Urethane decreases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [27]
Tocopherol DMBIJZ6 Phase 2 Tocopherol decreases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [28]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene increases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [29]
(+)-JQ1 DM1CZSJ Phase 1 (+)-JQ1 decreases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [30]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 decreases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [31]
Bisphenol A DM2ZLD7 Investigative Bisphenol A affects the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [32]
Formaldehyde DM7Q6M0 Investigative Formaldehyde increases the expression of DNA dC->dU-editing enzyme APOBEC-3C (APOBEC3C). [24]
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⏷ Show the Full List of 20 Drug(s)

References

1 Genome-wide association study of inhaled corticosteroid response in admixed children with asthma.Clin Exp Allergy. 2019 Jun;49(6):789-798. doi: 10.1111/cea.13354. Epub 2019 Feb 15.
2 Dynamic Pruritus Score: Evaluation of the Validity and Reliability of a New Instrument to Assess the Course of Pruritus.Acta Derm Venereol. 2017 Feb 8;97(2):230-234. doi: 10.2340/00015555-2494.
3 Percutaneous interventional management of biliary complications after pediatric liver transplantation: A 16-year single-institution experience.Pediatr Transplant. 2017 Feb;21(1). doi: 10.1111/petr.12837. Epub 2016 Oct 30.
4 Different antiviral activities of natural APOBEC3C, APOBEC3G, and APOBEC3H variants against hepatitis B virus.Biochem Biophys Res Commun. 2019 Oct 8;518(1):26-31. doi: 10.1016/j.bbrc.2019.08.003. Epub 2019 Aug 7.
5 Enhancing the Catalytic Deamination Activity of APOBEC3C Is Insufficient to Inhibit Vif-Deficient HIV-1.J Mol Biol. 2017 Apr 21;429(8):1171-1191. doi: 10.1016/j.jmb.2017.03.015. Epub 2017 Mar 16.
6 Species-specific restriction of apobec3-mediated hypermutation.J Virol. 2008 Feb;82(3):1305-13. doi: 10.1128/JVI.01371-07. Epub 2007 Nov 21.
7 Upregulation of TET1 and downregulation of APOBEC3A and APOBEC3C in the parietal cortex of psychotic patients.Transl Psychiatry. 2012 Sep 4;2(9):e159. doi: 10.1038/tp.2012.86.
8 Measuring Patient Needs and Benefits in Dermatology using the Patient Benefit Index 2.0: A Validation Study.Acta Derm Venereol. 2019 Feb 1;99(2):211-217. doi: 10.2340/00015555-3063.
9 Zika virus noncoding sfRNAs sequester multiple host-derived RNA-binding proteins and modulate mRNA decay and splicing during infection.J Biol Chem. 2019 Nov 1;294(44):16282-16296. doi: 10.1074/jbc.RA119.009129. Epub 2019 Sep 13.
10 Cross-Sectional Evaluation of Periodontal Status and Microbiologic and Rheumatoid Parameters in a Large Cohort of Patients With Rheumatoid Arthritis.J Periodontol. 2017 Apr;88(4):368-379. doi: 10.1902/jop.2016.160355. Epub 2016 Nov 18.
11 Integrative genomic analysis reveals functional diversification of APOBEC gene family in breast cancer.Hum Genomics. 2015 Dec 18;9:34. doi: 10.1186/s40246-015-0056-9.
12 Perceived maternal care is associated with emotional eating in young adults.Physiol Behav. 2019 Mar 15;201:91-94. doi: 10.1016/j.physbeh.2018.12.022. Epub 2018 Dec 20.
13 The Role of Partial Breast Radiation in the Previously Radiated Breast.Am J Clin Oncol. 2019 Dec;42(12):932-936. doi: 10.1097/COC.0000000000000584.
14 Gene Expression Regulation and Pathway Analysis After Valproic Acid and Carbamazepine Exposure in a Human Embryonic Stem Cell-Based Neurodevelopmental Toxicity Assay. Toxicol Sci. 2015 Aug;146(2):311-20. doi: 10.1093/toxsci/kfv094. Epub 2015 May 15.
15 Integrating multiple omics to unravel mechanisms of Cyclosporin A induced hepatotoxicity in vitro. Toxicol In Vitro. 2015 Apr;29(3):489-501.
16 Transcriptional and Metabolic Dissection of ATRA-Induced Granulocytic Differentiation in NB4 Acute Promyelocytic Leukemia Cells. Cells. 2020 Nov 5;9(11):2423. doi: 10.3390/cells9112423.
17 Multiple microRNAs function as self-protective modules in acetaminophen-induced hepatotoxicity in humans. Arch Toxicol. 2018 Feb;92(2):845-858.
18 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
19 Activation of AIFM2 enhances apoptosis of human lung cancer cells undergoing toxicological stress. Toxicol Lett. 2016 Sep 6;258:227-236.
20 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
21 The exosome-like vesicles derived from androgen exposed-prostate stromal cells promote epithelial cells proliferation and epithelial-mesenchymal transition. Toxicol Appl Pharmacol. 2021 Jan 15;411:115384. doi: 10.1016/j.taap.2020.115384. Epub 2020 Dec 25.
22 THC exposure of human iPSC neurons impacts genes associated with neuropsychiatric disorders. Transl Psychiatry. 2018 Apr 25;8(1):89. doi: 10.1038/s41398-018-0137-3.
23 Pharmacogenomic identification of novel determinants of response to chemotherapy in colon cancer. Cancer Res. 2006 Mar 1;66(5):2765-77.
24 Characterization of formaldehyde's genotoxic mode of action by gene expression analysis in TK6 cells. Arch Toxicol. 2013 Nov;87(11):1999-2012.
25 Transcriptional profiling of testosterone-regulated genes in the skeletal muscle of human immunodeficiency virus-infected men experiencing weight loss. J Clin Endocrinol Metab. 2007 Jul;92(7):2793-802. doi: 10.1210/jc.2006-2722. Epub 2007 Apr 17.
26 Induction of APOBEC3C Facilitates the Genotoxic Stress-Mediated Cytotoxicity of Artesunate. Chem Res Toxicol. 2019 Dec 16;32(12):2526-2537. doi: 10.1021/acs.chemrestox.9b00358. Epub 2019 Nov 11.
27 Ethyl carbamate induces cell death through its effects on multiple metabolic pathways. Chem Biol Interact. 2017 Nov 1;277:21-32.
28 Selenium and vitamin E: cell type- and intervention-specific tissue effects in prostate cancer. J Natl Cancer Inst. 2009 Mar 4;101(5):306-20.
29 Comparison of HepG2 and HepaRG by whole-genome gene expression analysis for the purpose of chemical hazard identification. Toxicol Sci. 2010 May;115(1):66-79.
30 Bromodomain-containing protein 4 (BRD4) regulates RNA polymerase II serine 2 phosphorylation in human CD4+ T cells. J Biol Chem. 2012 Dec 14;287(51):43137-55.
31 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
32 Comprehensive analysis of transcriptomic changes induced by low and high doses of bisphenol A in HepG2 spheroids in vitro and rat liver in vivo. Environ Res. 2019 Jun;173:124-134. doi: 10.1016/j.envres.2019.03.035. Epub 2019 Mar 18.
33 Gene expression profiling of 30 cancer cell lines predicts resistance towards 11 anticancer drugs at clinically achieved concentrations. Int J Cancer. 2006 Apr 1;118(7):1699-712. doi: 10.1002/ijc.21570.