General Information of Drug Off-Target (DOT) (ID: OTKDEEYX)

DOT Name Vigilin (HDLBP)
Synonyms High density lipoprotein-binding protein; HDL-binding protein
Gene Name HDLBP
Related Disease
Coronary heart disease ( )
Familial lipoprotein lipase deficiency ( )
Neoplasm ( )
Non-insulin dependent diabetes ( )
Small lymphocytic lymphoma ( )
2q37 microdeletion syndrome ( )
Abscess ( )
Advanced cancer ( )
Alzheimer disease ( )
Arteriosclerosis ( )
Atherosclerosis ( )
Autism ( )
Bacterial meningitis ( )
Breast cancer ( )
Breast carcinoma ( )
Cardiovascular disease ( )
Chronic obstructive pulmonary disease ( )
Congestive heart failure ( )
Diabetic kidney disease ( )
Fatty liver disease ( )
Graves disease ( )
Hepatocellular carcinoma ( )
Intrahepatic cholangiocarcinoma ( )
Liver cirrhosis ( )
Small-cell lung cancer ( )
Toxic epidermal necrolysis ( )
Bacterial infection ( )
Ductal breast carcinoma in situ ( )
Prostate cancer ( )
UniProt ID
VIGLN_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
PDB ID
1VIG; 1VIH; 2CTE; 2CTF; 2CTJ; 2CTK; 2CTL; 2CTM
Pfam ID
PF00013
Sequence
MSSVAVLTQESFAEHRSGLVPQQIKVATLNSEEESDPPTYKDAFPPLPEKAACLESAQEP
AGAWGNKIRPIKASVITQVFHVPLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLA
KDQGLSIMVSGKLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKT
ATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGP
YNRLVGEIMQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAV
EVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQALTEVYAK
ANSFTVSSVAAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVNVA
QEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNL
IRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEV
IINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKG
GANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSI
PAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLA
EEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKE
DAVREAQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRS
GTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQIT
RDFSVQIKFPDREENAVHSTEPVVQENGDEAGEGREAKDCDPGSPRRCDIIIISGRKEKC
EAAKEALEALVPVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAI
TGLAANLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRL
EHDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHA
RIIGARGKAIRKIMDEFKVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHILNLEEEYLAD
VVDSEALQVYMKPPAHEEAKAPSRGFVVRDAPWTASSSEKAPDMSSSEEFPSFGAQVAPK
TLPWGPKR
Function Appears to play a role in cell sterol metabolism. It may function to protect cells from over-accumulation of cholesterol.
Reactome Pathway
HDL clearance (R-HSA-8964011 )

Molecular Interaction Atlas (MIA) of This DOT

29 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Coronary heart disease DIS5OIP1 Definitive Biomarker [1]
Familial lipoprotein lipase deficiency DIS0M7NJ Definitive Genetic Variation [1]
Neoplasm DISZKGEW Definitive Biomarker [2]
Non-insulin dependent diabetes DISK1O5Z Definitive Biomarker [3]
Small lymphocytic lymphoma DIS30POX Definitive Genetic Variation [4]
2q37 microdeletion syndrome DISZYHCB Strong Biomarker [5]
Abscess DISAP982 Strong Biomarker [6]
Advanced cancer DISAT1Z9 Strong Biomarker [7]
Alzheimer disease DISF8S70 Strong Genetic Variation [8]
Arteriosclerosis DISK5QGC Strong Altered Expression [9]
Atherosclerosis DISMN9J3 Strong Altered Expression [9]
Autism DISV4V1Z Strong Biomarker [5]
Bacterial meningitis DISRP9SL Strong Altered Expression [10]
Breast cancer DIS7DPX1 Strong Biomarker [11]
Breast carcinoma DIS2UE88 Strong Biomarker [11]
Cardiovascular disease DIS2IQDX Strong Biomarker [12]
Chronic obstructive pulmonary disease DISQCIRF Strong Biomarker [13]
Congestive heart failure DIS32MEA Strong Biomarker [13]
Diabetic kidney disease DISJMWEY Strong Biomarker [14]
Fatty liver disease DIS485QZ Strong Biomarker [15]
Graves disease DISU4KOQ Strong Biomarker [16]
Hepatocellular carcinoma DIS0J828 Strong Biomarker [17]
Intrahepatic cholangiocarcinoma DIS6GOC8 Strong Biomarker [18]
Liver cirrhosis DIS4G1GX Strong Altered Expression [2]
Small-cell lung cancer DISK3LZD Strong Biomarker [7]
Toxic epidermal necrolysis DISIWPFR Strong Biomarker [19]
Bacterial infection DIS5QJ9S moderate Biomarker [20]
Ductal breast carcinoma in situ DISLCJY7 moderate Altered Expression [11]
Prostate cancer DISF190Y moderate Altered Expression [21]
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⏷ Show the Full List of 29 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
This DOT Affected the Drug Response of 1 Drug(s)
Drug Name Drug ID Highest Status Interaction REF
Isotretinoin DM4QTBN Approved Vigilin (HDLBP) increases the Lipids abnormal ADR of Isotretinoin. [37]
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5 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the methylation of Vigilin (HDLBP). [22]
Quercetin DM3NC4M Approved Quercetin decreases the phosphorylation of Vigilin (HDLBP). [28]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene increases the methylation of Vigilin (HDLBP). [34]
PMID28870136-Compound-52 DMFDERP Patented PMID28870136-Compound-52 affects the phosphorylation of Vigilin (HDLBP). [28]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the methylation of Vigilin (HDLBP). [36]
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10 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Ciclosporin DMAZJFX Approved Ciclosporin increases the expression of Vigilin (HDLBP). [23]
Tretinoin DM49DUI Approved Tretinoin decreases the expression of Vigilin (HDLBP). [24]
Doxorubicin DMVP5YE Approved Doxorubicin decreases the expression of Vigilin (HDLBP). [25]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of Vigilin (HDLBP). [26]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of Vigilin (HDLBP). [27]
Vorinostat DMWMPD4 Approved Vorinostat decreases the expression of Vigilin (HDLBP). [29]
Selenium DM25CGV Approved Selenium increases the expression of Vigilin (HDLBP). [30]
Zidovudine DM4KI7O Approved Zidovudine decreases the expression of Vigilin (HDLBP). [31]
PEITC DMOMN31 Phase 2 PEITC decreases the expression of Vigilin (HDLBP). [33]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 increases the expression of Vigilin (HDLBP). [35]
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⏷ Show the Full List of 10 Drug(s)
1 Drug(s) Affected the Protein Interaction/Cellular Processes of This DOT
Drug Name Drug ID Highest Status Interaction REF
DNCB DMDTVYC Phase 2 DNCB affects the binding of Vigilin (HDLBP). [32]
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References

1 Novel combined GPIHBP1 mutations in a patient with hypertriglyceridemia associated with CAD.J Atheroscler Thromb. 2013;20(10):777-84. doi: 10.5551/jat.18861. Epub 2013 Jul 8.
2 Vigilin is overexpressed in hepatocellular carcinoma and is required for HCC cell proliferation and tumor growth.Oncol Rep. 2014 May;31(5):2328-34. doi: 10.3892/or.2014.3111. Epub 2014 Mar 24.
3 Isolated high home systolic blood pressure in patients with type 2 diabetes is a prognostic factor for the development of diabetic nephropathy: KAMOGAWA-HBP study.Diabetes Res Clin Pract. 2019 Dec;158:107920. doi: 10.1016/j.diabres.2019.107920. Epub 2019 Nov 8.
4 Meta-analysis of genome-wide association studies discovers multiple loci for chronic lymphocytic leukemia.Nat Commun. 2016 Mar 9;7:10933. doi: 10.1038/ncomms10933.
5 FARP2, HDLBP and PASK are downregulated in a patient with autism and 2q37.3 deletion syndrome.Am J Med Genet A. 2009 May;149A(5):952-9. doi: 10.1002/ajmg.a.32779.
6 Escherichia coli hemoglobin protease autotransporter contributes to synergistic abscess formation and heme-dependent growth of Bacteroides fragilis.Infect Immun. 2002 Jan;70(1):5-10. doi: 10.1128/IAI.70.1.5-10.2002.
7 A new small cell lung cancer biomarker identified by Cell-SELEX generated aptamers.Exp Cell Res. 2019 Sep 15;382(2):111478. doi: 10.1016/j.yexcr.2019.06.023. Epub 2019 Jun 21.
8 The Healthy Brain Project: An Online Platform for the Recruitment, Assessment, and Monitoring of Middle-Aged Adults at Risk of Developing Alzheimer's Disease.J Alzheimers Dis. 2019;68(3):1211-1228. doi: 10.3233/JAD-181139.
9 High-density lipoprotein-binding protein (HBP)/vigilin is expressed in human atherosclerotic lesions and colocalizes with apolipoprotein E.Arterioscler Thromb Vasc Biol. 1997 Nov;17(11):2350-8. doi: 10.1161/01.atv.17.11.2350.
10 Accuracy of heparin binding protein: as a new marker in prediction of acute bacterial meningitis.Braz J Microbiol. 2018 Nov;49 Suppl 1(Suppl 1):213-219. doi: 10.1016/j.bjm.2018.05.007. Epub 2018 Aug 17.
11 Phenotype of vigilin expressing breast cancer cells binding to the 69 nt 3'UTR element in CSF-1R mRNA.Transl Oncol. 2019 Jan;12(1):106-115. doi: 10.1016/j.tranon.2018.09.012. Epub 2018 Oct 3.
12 A jack of all trades: the RNA-binding protein vigilin.Wiley Interdiscip Rev RNA. 2017 Nov;8(6). doi: 10.1002/wrna.1448. Epub 2017 Oct 4.
13 Home-based telerehabilitation in older patients with chronic obstructive pulmonary disease and heart failure: a randomised controlled trial.Age Ageing. 2018 Jan 1;47(1):82-88. doi: 10.1093/ageing/afx146.
14 Maximum morning home systolic blood pressure is an indicator of the development of diabetic nephropathy: The KAMOGAWA-HBP study.J Diabetes Investig. 2019 Nov;10(6):1543-1549. doi: 10.1111/jdi.13040. Epub 2019 May 7.
15 Iso- or hyperintensity of hepatocellular adenomas on hepatobiliary phase does not always correspond to hepatospecific contrast-agent uptake: importance for tumor subtyping.Eur Radiol. 2019 Jul;29(7):3791-3801. doi: 10.1007/s00330-019-06150-7. Epub 2019 Apr 1.
16 Follow-up of potential novel Graves' disease susceptibility loci, identified in the UK WTCCC genome-wide nonsynonymous SNP study.Eur J Hum Genet. 2010 Sep;18(9):1021-6. doi: 10.1038/ejhg.2010.55. Epub 2010 May 5.
17 LI-RADS v2014 categorization of hepatocellular carcinoma: Intraindividual comparison between gadopentetate dimeglumine-enhanced MRI and gadoxetic acid-enhanced MRI.Eur Radiol. 2019 Jan;29(1):401-410. doi: 10.1007/s00330-018-5559-z. Epub 2018 Jun 19.
18 Differentiation between inflammatory myofibroblastic tumor and cholangiocarcinoma manifesting as target appearance on gadoxetic acid-enhanced MRI.Abdom Radiol (NY). 2019 Apr;44(4):1395-1406. doi: 10.1007/s00261-018-1847-y.
19 Human somatic cell mutagenesis creates genetically tractable sarcomas.Nat Genet. 2014 Sep;46(9):964-72. doi: 10.1038/ng.3065. Epub 2014 Aug 17.
20 Heparin-binding protein: a key player in the pathophysiology of organ dysfunction in sepsis.J Intern Med. 2017 Jun;281(6):562-574. doi: 10.1111/joim.12604. Epub 2017 Mar 28.
21 O-GlcNAc transferase integrates metabolic pathways to regulate the stability of c-MYC in human prostate cancer cells.Cancer Res. 2013 Aug 15;73(16):5277-87. doi: 10.1158/0008-5472.CAN-13-0549. Epub 2013 May 29.
22 Integrative omics data analyses of repeated dose toxicity of valproic acid in vitro reveal new mechanisms of steatosis induction. Toxicology. 2018 Jan 15;393:160-170.
23 Comparison of HepG2 and HepaRG by whole-genome gene expression analysis for the purpose of chemical hazard identification. Toxicol Sci. 2010 May;115(1):66-79.
24 Development of a neural teratogenicity test based on human embryonic stem cells: response to retinoic acid exposure. Toxicol Sci. 2011 Dec;124(2):370-7.
25 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
26 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
27 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
28 Quantitative phosphoproteomics reveal cellular responses from caffeine, coumarin and quercetin in treated HepG2 cells. Toxicol Appl Pharmacol. 2022 Aug 15;449:116110. doi: 10.1016/j.taap.2022.116110. Epub 2022 Jun 7.
29 A transcriptome-based classifier to identify developmental toxicants by stem cell testing: design, validation and optimization for histone deacetylase inhibitors. Arch Toxicol. 2015 Sep;89(9):1599-618.
30 Selenium and vitamin E: cell type- and intervention-specific tissue effects in prostate cancer. J Natl Cancer Inst. 2009 Mar 4;101(5):306-20.
31 Morphological and molecular course of mitochondrial pathology in cultured human cells exposed long-term to Zidovudine. Environ Mol Mutagen. 2007 Apr-May;48(3-4):179-89. doi: 10.1002/em.20245.
32 Proteomic analysis of the cellular response to a potent sensitiser unveils the dynamics of haptenation in living cells. Toxicology. 2020 Dec 1;445:152603. doi: 10.1016/j.tox.2020.152603. Epub 2020 Sep 28.
33 Phenethyl isothiocyanate alters the gene expression and the levels of protein associated with cell cycle regulation in human glioblastoma GBM 8401 cells. Environ Toxicol. 2017 Jan;32(1):176-187.
34 Air pollution and DNA methylation alterations in lung cancer: A systematic and comparative study. Oncotarget. 2017 Jan 3;8(1):1369-1391. doi: 10.18632/oncotarget.13622.
35 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
36 DNA methylome-wide alterations associated with estrogen receptor-dependent effects of bisphenols in breast cancer. Clin Epigenetics. 2019 Oct 10;11(1):138. doi: 10.1186/s13148-019-0725-y.
37 ADReCS-Target: target profiles for aiding drug safety research and application. Nucleic Acids Res. 2018 Jan 4;46(D1):D911-D917. doi: 10.1093/nar/gkx899.