General Information of Drug Off-Target (DOT) (ID: OTQHB52T)

DOT Name Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1)
Synonyms P5C reductase 1; P5CR 1; EC 1.5.1.2
Gene Name PYCR1
Related Disease
Autosomal recessive cutis laxa type 2B ( )
PYCR1-related de Barsy syndrome ( )
Adult hepatocellular carcinoma ( )
B-cell neoplasm ( )
Benign prostatic hyperplasia ( )
Cockayne syndrome ( )
Colorectal carcinoma ( )
Congenital disorder of glycosylation ( )
Familial Alzheimer disease ( )
Hutchinson-Gilford progeria syndrome ( )
Kidney cancer ( )
Liver cancer ( )
Lung adenocarcinoma ( )
Lung cancer ( )
Lung carcinoma ( )
Measles ( )
Neoplasm ( )
Non-small-cell lung cancer ( )
Pancreatitis ( )
Papillary renal cell carcinoma ( )
Premature aging syndrome ( )
Prostate cancer ( )
Prostate carcinoma ( )
Renal carcinoma ( )
Breast cancer ( )
Breast carcinoma ( )
Castration-resistant prostate carcinoma ( )
Clear cell renal carcinoma ( )
Corpus callosum, agenesis of ( )
Renal cell carcinoma ( )
Geroderma osteodysplastica ( )
Melanoma ( )
Advanced cancer ( )
Colitis ( )
De Barsy syndrome ( )
Hepatocellular carcinoma ( )
Intellectual disability ( )
Psychotic disorder ( )
UniProt ID
P5CR1_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
PDB ID
2GER; 2GR9; 2GRA; 2IZZ; 5UAT; 5UAU; 5UAV; 5UAW; 5UAX; 6XOZ; 6XP0; 6XP1; 6XP2; 6XP3; 8DKG
EC Number
1.5.1.2
Pfam ID
PF03807 ; PF14748
Sequence
MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETV
QHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRC
MTNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAY
AFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPGGATIH
ALHVLESGGFRSLLINAVEASCIRTRELQSMADQEQVSPAAIKKTILDKVKLDSPAGTAL
SPSGHTKLLPRSLAPAGKD
Function Housekeeping enzyme that catalyzes the last step in proline biosynthesis. Can utilize both NAD and NADP, but has higher affinity for NAD. Involved in the cellular response to oxidative stress.
KEGG Pathway
Arginine and proline metabolism (hsa00330 )
Metabolic pathways (hsa01100 )
Biosynthesis of amino acids (hsa01230 )
Reactome Pathway
Glutamate and glutamine metabolism (R-HSA-8964539 )
BioCyc Pathway
MetaCyc:HS06848-MONOMER

Molecular Interaction Atlas (MIA) of This DOT

38 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Autosomal recessive cutis laxa type 2B DIS7URGV Definitive Autosomal recessive [1]
PYCR1-related de Barsy syndrome DIS9EFII Definitive Autosomal recessive [2]
Adult hepatocellular carcinoma DIS6ZPAI Strong Biomarker [3]
B-cell neoplasm DISVY326 Strong Altered Expression [4]
Benign prostatic hyperplasia DISI3CW2 Strong Genetic Variation [5]
Cockayne syndrome DISW6GL2 Strong Genetic Variation [6]
Colorectal carcinoma DIS5PYL0 Strong Altered Expression [7]
Congenital disorder of glycosylation DIS400QP Strong Biomarker [8]
Familial Alzheimer disease DISE75U4 Strong Genetic Variation [9]
Hutchinson-Gilford progeria syndrome DISY55BU Strong Genetic Variation [10]
Kidney cancer DISBIPKM Strong Biomarker [11]
Liver cancer DISDE4BI Strong Biomarker [3]
Lung adenocarcinoma DISD51WR Strong Altered Expression [12]
Lung cancer DISCM4YA Strong Biomarker [4]
Lung carcinoma DISTR26C Strong Biomarker [4]
Measles DISXSUID Strong Biomarker [13]
Neoplasm DISZKGEW Strong Biomarker [14]
Non-small-cell lung cancer DIS5Y6R9 Strong Altered Expression [15]
Pancreatitis DIS0IJEF Strong Biomarker [16]
Papillary renal cell carcinoma DIS25HBV Strong Biomarker [17]
Premature aging syndrome DIS51AGT Strong Genetic Variation [18]
Prostate cancer DISF190Y Strong Altered Expression [4]
Prostate carcinoma DISMJPLE Strong Altered Expression [4]
Renal carcinoma DISER9XT Strong Biomarker [11]
Breast cancer DIS7DPX1 moderate Biomarker [19]
Breast carcinoma DIS2UE88 moderate Biomarker [19]
Castration-resistant prostate carcinoma DISVGAE6 moderate Biomarker [20]
Clear cell renal carcinoma DISBXRFJ moderate Altered Expression [21]
Corpus callosum, agenesis of DISO9P40 moderate Genetic Variation [22]
Renal cell carcinoma DISQZ2X8 moderate Altered Expression [21]
Geroderma osteodysplastica DISFPJ78 Supportive Autosomal recessive [23]
Melanoma DIS1RRCY Disputed Altered Expression [24]
Advanced cancer DISAT1Z9 Limited Biomarker [25]
Colitis DISAF7DD Limited Altered Expression [26]
De Barsy syndrome DISUQYF3 Limited Genetic Variation [27]
Hepatocellular carcinoma DIS0J828 Limited Altered Expression [14]
Intellectual disability DISMBNXP Limited Genetic Variation [28]
Psychotic disorder DIS4UQOT Limited Genetic Variation [29]
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⏷ Show the Full List of 38 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
3 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate increases the methylation of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [30]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene increases the methylation of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [43]
PMID28870136-Compound-52 DMFDERP Patented PMID28870136-Compound-52 decreases the phosphorylation of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [46]
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20 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Tretinoin DM49DUI Approved Tretinoin decreases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [31]
Acetaminophen DMUIE76 Approved Acetaminophen decreases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [32]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [33]
Cisplatin DMRHGI9 Approved Cisplatin increases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [34]
Estradiol DMUNTE3 Approved Estradiol increases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [35]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [36]
Temozolomide DMKECZD Approved Temozolomide increases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [37]
Hydrogen peroxide DM1NG5W Approved Hydrogen peroxide affects the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [38]
Testosterone DM7HUNW Approved Testosterone increases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [39]
Dexamethasone DMMWZET Approved Dexamethasone decreases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [40]
Clozapine DMFC71L Approved Clozapine increases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [41]
Cidofovir DMA13GD Approved Cidofovir increases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [34]
Ifosfamide DMCT3I8 Approved Ifosfamide increases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [34]
Clodronate DM9Y6X7 Approved Clodronate increases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [34]
Benzatropine DMF7EXL Approved Benzatropine increases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [41]
Urethane DM7NSI0 Phase 4 Urethane decreases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [42]
(+)-JQ1 DM1CZSJ Phase 1 (+)-JQ1 decreases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [44]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 increases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [45]
THAPSIGARGIN DMDMQIE Preclinical THAPSIGARGIN increases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [47]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the expression of Pyrroline-5-carboxylate reductase 1, mitochondrial (PYCR1). [40]
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⏷ Show the Full List of 20 Drug(s)

References

1 Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020 Feb;22(2):245-257. doi: 10.1038/s41436-019-0686-8. Epub 2019 Nov 6.
2 Classification of Genes: Standardized Clinical Validity Assessment of Gene-Disease Associations Aids Diagnostic Exome Analysis and Reclassifications. Hum Mutat. 2017 May;38(5):600-608. doi: 10.1002/humu.23183. Epub 2017 Feb 13.
3 PYCR1 interference inhibits cell growth and survival via c-Jun N-terminal kinase/insulin receptor substrate 1 (JNK/IRS1) pathway in hepatocellular cancer.J Transl Med. 2019 Oct 16;17(1):343. doi: 10.1186/s12967-019-2091-0.
4 Pyrroline-5-carboxylate reductase 1 promotes proliferation and inhibits apoptosis in non-small cell lung cancer.Oncol Lett. 2018 Jan;15(1):731-740. doi: 10.3892/ol.2017.7400. Epub 2017 Nov 14.
5 MSR1 variants and the risks of prostate cancer and benign prostatic hyperplasia: a population-based study in China.Carcinogenesis. 2007 Dec;28(12):2530-6. doi: 10.1093/carcin/bgm196. Epub 2007 Sep 3.
6 A Transcriptome Study of Progeroid Neurocutaneous Syndrome Reveals POSTN As a New Element in Proline Metabolic Disorder.Aging Dis. 2018 Dec 4;9(6):1043-1057. doi: 10.14336/AD.2018.0222. eCollection 2018 Dec.
7 Knockdown of PYCR1 inhibits proliferation, drug resistance and EMT in colorectal cancer cells by regulating STAT3-Mediated p38 MAPK and NF-B signalling pathway.Biochem Biophys Res Commun. 2019 Dec 3;520(2):486-491. doi: 10.1016/j.bbrc.2019.10.059. Epub 2019 Oct 10.
8 Metabolic cutis laxa syndromes.J Inherit Metab Dis. 2011 Aug;34(4):907-16. doi: 10.1007/s10545-011-9305-9. Epub 2011 Mar 23.
9 Detailed characterization of neuroprotection by a rescue factor humanin against various Alzheimer's disease-relevant insults.J Neurosci. 2001 Dec 1;21(23):9235-45. doi: 10.1523/JNEUROSCI.21-23-09235.2001.
10 Analyses of LMNA-negative juvenile progeroid cases confirms biallelic POLR3A mutations in Wiedemann-Rautenstrauch-like syndrome and expands the phenotypic spectrum of PYCR1 mutations.Hum Genet. 2018 Dec;137(11-12):921-939. doi: 10.1007/s00439-018-1957-1. Epub 2018 Nov 19.
11 Tumour-specific proline vulnerability uncovered by differential ribosome codon reading.Nature. 2016 Feb 25;530(7591):490-4. doi: 10.1038/nature16982. Epub 2016 Feb 15.
12 Kindlin-2 links mechano-environment to proline synthesis and tumor growth.Nat Commun. 2019 Feb 19;10(1):845. doi: 10.1038/s41467-019-08772-3.
13 The phosphoprotein genes of measles viruses from subacute sclerosing panencephalitis cases encode functional as well as non-functional proteins and display reduced editing.Virus Res. 2016 Jan 4;211:29-37. doi: 10.1016/j.virusres.2015.09.016. Epub 2015 Sep 28.
14 Metabolic pathway analyses identify proline biosynthesis pathway as a promoter of liver tumorigenesis.J Hepatol. 2020 Apr;72(4):725-735. doi: 10.1016/j.jhep.2019.10.026. Epub 2019 Nov 11.
15 PYCR1 promotes the progression of non-small-cell lung cancer under the negative regulation of miR-488.Biomed Pharmacother. 2019 Mar;111:588-595. doi: 10.1016/j.biopha.2018.12.089. Epub 2018 Dec 31.
16 Clusterin and Pycr1 alterations associate with strain and model differences in susceptibility to experimental pancreatitis.Biochem Biophys Res Commun. 2017 Jan 22;482(4):1346-1352. doi: 10.1016/j.bbrc.2016.12.039. Epub 2016 Dec 7.
17 PYCR1 is Associated with Papillary Renal Cell Carcinoma Progression.Open Med (Wars). 2019 Aug 14;14:586-592. doi: 10.1515/med-2019-0066. eCollection 2019.
18 A novel mutation in PYCR1 causes an autosomal recessive cutis laxa with premature aging features in a family.Am J Med Genet A. 2011 Jun;155A(6):1285-9. doi: 10.1002/ajmg.a.33963. Epub 2011 May 12.
19 Identification of lncRNA TRPM2-AS/miR-140-3p/PYCR1 axis's proliferates and anti-apoptotic effect on breast cancer using co-expression network analysis.Cancer Biol Ther. 2019;20(6):760-773. doi: 10.1080/15384047.2018.1564563. Epub 2019 Feb 27.
20 Identification of novel androgen receptor target genes in prostate cancer.Mol Cancer. 2007 Jun 6;6:39. doi: 10.1186/1476-4598-6-39.
21 The clinical significance of PYCR1 expression in renal cell carcinoma.Medicine (Baltimore). 2019 Jul;98(28):e16384. doi: 10.1097/MD.0000000000016384.
22 Clinical and biochemical features guiding the diagnostics in neurometabolic cutis laxa. Eur J Hum Genet. 2014 Jul;22(7):888-95. doi: 10.1038/ejhg.2013.154. Epub 2013 Aug 21.
23 The phenotype caused by PYCR1 mutations corresponds to geroderma osteodysplasticum rather than autosomal recessive cutis laxa type 2. Am J Med Genet A. 2011 Jan;155A(1):134-40. doi: 10.1002/ajmg.a.33747. Epub 2010 Dec 9.
24 Pyrroline-5-carboxylate reductase 1 promotes cell proliferation via inhibiting apoptosis in human malignant melanoma.Cancer Manag Res. 2018 Nov 27;10:6399-6407. doi: 10.2147/CMAR.S166711. eCollection 2018.
25 SIRT3 regulates cancer cell proliferation through deacetylation of PYCR1 in proline metabolism.Neoplasia. 2019 Jul;21(7):665-675. doi: 10.1016/j.neo.2019.04.008. Epub 2019 May 17.
26 Pyroglutamide-Based P2X7 Receptor Antagonists Targeting Inflammatory Bowel Disease.J Med Chem. 2020 Mar 12;63(5):2074-2094. doi: 10.1021/acs.jmedchem.9b00584. Epub 2019 Sep 27.
27 Compound heterozygous mutations in PYCR1 further expand the phenotypic spectrum of De Barsy syndrome.Am J Med Genet A. 2011 Dec;155A(12):3095-9. doi: 10.1002/ajmg.a.34326. Epub 2011 Nov 3.
28 Sublethal endoplasmic reticulum stress caused by the mutation of immunoglobulin heavy chain-binding protein inducesthe synthesis of a mitochondrial protein, pyrroline-5-carboxylate reductase 1.Cell Stress Chaperones. 2017 Jan;22(1):77-85. doi: 10.1007/s12192-016-0741-1. Epub 2016 Oct 28.
29 Sedentary behaviour, physical activity, cardiorespiratory fitness and cardiometabolic risk in psychosis: The PsychiActive project.Schizophr Res. 2018 May;195:142-148. doi: 10.1016/j.schres.2017.10.012. Epub 2017 Oct 21.
30 Integrative omics data analyses of repeated dose toxicity of valproic acid in vitro reveal new mechanisms of steatosis induction. Toxicology. 2018 Jan 15;393:160-170.
31 Transcriptional and Metabolic Dissection of ATRA-Induced Granulocytic Differentiation in NB4 Acute Promyelocytic Leukemia Cells. Cells. 2020 Nov 5;9(11):2423. doi: 10.3390/cells9112423.
32 Predictive toxicology using systemic biology and liver microfluidic "on chip" approaches: application to acetaminophen injury. Toxicol Appl Pharmacol. 2012 Mar 15;259(3):270-80.
33 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
34 Transcriptomics hit the target: monitoring of ligand-activated and stress response pathways for chemical testing. Toxicol In Vitro. 2015 Dec 25;30(1 Pt A):7-18.
35 17-Estradiol Activates HSF1 via MAPK Signaling in ER-Positive Breast Cancer Cells. Cancers (Basel). 2019 Oct 11;11(10):1533. doi: 10.3390/cancers11101533.
36 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
37 Temozolomide induces activation of Wnt/-catenin signaling in glioma cells via PI3K/Akt pathway: implications in glioma therapy. Cell Biol Toxicol. 2020 Jun;36(3):273-278. doi: 10.1007/s10565-019-09502-7. Epub 2019 Nov 22.
38 Minimal peroxide exposure of neuronal cells induces multifaceted adaptive responses. PLoS One. 2010 Dec 17;5(12):e14352. doi: 10.1371/journal.pone.0014352.
39 The exosome-like vesicles derived from androgen exposed-prostate stromal cells promote epithelial cells proliferation and epithelial-mesenchymal transition. Toxicol Appl Pharmacol. 2021 Jan 15;411:115384. doi: 10.1016/j.taap.2020.115384. Epub 2020 Dec 25.
40 Identification of mechanisms of action of bisphenol a-induced human preadipocyte differentiation by transcriptional profiling. Obesity (Silver Spring). 2014 Nov;22(11):2333-43.
41 Cannabidiol Displays Proteomic Similarities to Antipsychotics in Cuprizone-Exposed Human Oligodendrocytic Cell Line MO3.13. Front Mol Neurosci. 2021 May 28;14:673144. doi: 10.3389/fnmol.2021.673144. eCollection 2021.
42 Ethyl carbamate induces cell death through its effects on multiple metabolic pathways. Chem Biol Interact. 2017 Nov 1;277:21-32.
43 Air pollution and DNA methylation alterations in lung cancer: A systematic and comparative study. Oncotarget. 2017 Jan 3;8(1):1369-1391. doi: 10.18632/oncotarget.13622.
44 BET bromodomain inhibition targets both c-Myc and IL7R in high-risk acute lymphoblastic leukemia. Blood. 2012 Oct 4;120(14):2843-52.
45 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
46 Quantitative phosphoproteomics reveal cellular responses from caffeine, coumarin and quercetin in treated HepG2 cells. Toxicol Appl Pharmacol. 2022 Aug 15;449:116110. doi: 10.1016/j.taap.2022.116110. Epub 2022 Jun 7.
47 Endoplasmic reticulum stress impairs insulin signaling through mitochondrial damage in SH-SY5Y cells. Neurosignals. 2012;20(4):265-80.