General Information of Drug Off-Target (DOT) (ID: OTQB1ID1)

DOT Name Small nuclear ribonucleoprotein-associated protein N (SNRPN)
Synonyms snRNP-N; Sm protein D; Sm-D; Sm protein N; Sm-N; SmN; Tissue-specific-splicing protein
Gene Name SNRPN
Related Disease
Cone-rod dystrophy 2 ( )
Acute undifferentiated leukemia ( )
Adult glioblastoma ( )
Adult lymphoma ( )
Amyotrophic lateral sclerosis ( )
Arthrogryposis ( )
Astrocytoma ( )
Ataxia-telangiectasia ( )
Autism ( )
Autism spectrum disorder ( )
Beckwith-Wiedemann syndrome ( )
Breast cancer ( )
Breast carcinoma ( )
Charcot marie tooth disease ( )
Epithelial ovarian cancer ( )
Ewing sarcoma ( )
Fragile X syndrome ( )
Glioblastoma multiforme ( )
Leiomyoma ( )
Lymphoma ( )
Male infertility ( )
Malignant neoplasm ( )
Motor neurone disease ( )
Myopathy ( )
Neurodevelopmental disorder ( )
Neuromuscular disease ( )
Obesity ( )
Osteoarthritis ( )
Pediatric lymphoma ( )
Polymyositis ( )
Prostate cancer ( )
Prostate carcinoma ( )
Respiratory failure ( )
Schizophrenia ( )
Seminoma ( )
Small lymphocytic lymphoma ( )
Spinal disease ( )
Systemic lupus erythematosus ( )
Teratoma ( )
Uterine fibroids ( )
Mental disorder ( )
Spinal muscular atrophy, type III ( )
Germ cell tumor ( )
Neuroblastoma ( )
UniProt ID
RSMN_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
PDB ID
5MF9
Pfam ID
PF01423
Sequence
MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPI
PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQYPPGRGTPPPPVG
RATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPPPGMRPPRP
Function May be involved in tissue-specific alternative RNA processing events.
Tissue Specificity Expressed in brain and lymphoblasts.
Reactome Pathway
mRNA Splicing - Major Pathway (R-HSA-72163 )

Molecular Interaction Atlas (MIA) of This DOT

44 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Cone-rod dystrophy 2 DISX2RWY Definitive Biomarker [1]
Acute undifferentiated leukemia DISJ4SSG Strong Biomarker [2]
Adult glioblastoma DISVP4LU Strong Altered Expression [3]
Adult lymphoma DISK8IZR Strong Biomarker [4]
Amyotrophic lateral sclerosis DISF7HVM Strong Biomarker [5]
Arthrogryposis DISC81CM Strong Genetic Variation [6]
Astrocytoma DISL3V18 Strong Altered Expression [7]
Ataxia-telangiectasia DISP3EVR Strong Biomarker [8]
Autism DISV4V1Z Strong Altered Expression [9]
Autism spectrum disorder DISXK8NV Strong Biomarker [10]
Beckwith-Wiedemann syndrome DISH15GR Strong Genetic Variation [11]
Breast cancer DIS7DPX1 Strong Posttranslational Modification [12]
Breast carcinoma DIS2UE88 Strong Posttranslational Modification [12]
Charcot marie tooth disease DIS3BT2L Strong Genetic Variation [13]
Epithelial ovarian cancer DIS56MH2 Strong Biomarker [14]
Ewing sarcoma DISQYLV3 Strong Biomarker [15]
Fragile X syndrome DISE8W3A Strong Genetic Variation [12]
Glioblastoma multiforme DISK8246 Strong Altered Expression [3]
Leiomyoma DISLDDFN Strong Genetic Variation [16]
Lymphoma DISN6V4S Strong Biomarker [4]
Male infertility DISY3YZZ Strong Biomarker [17]
Malignant neoplasm DISS6SNG Strong Biomarker [18]
Motor neurone disease DISUHWUI Strong Genetic Variation [19]
Myopathy DISOWG27 Strong Altered Expression [20]
Neurodevelopmental disorder DIS372XH Strong Biomarker [21]
Neuromuscular disease DISQTIJZ Strong Biomarker [22]
Obesity DIS47Y1K Strong Genetic Variation [23]
Osteoarthritis DIS05URM Strong Biomarker [17]
Pediatric lymphoma DIS51BK2 Strong Biomarker [4]
Polymyositis DIS5DHFP Strong Biomarker [24]
Prostate cancer DISF190Y Strong Biomarker [25]
Prostate carcinoma DISMJPLE Strong Biomarker [25]
Respiratory failure DISVMYJO Strong Biomarker [26]
Schizophrenia DISSRV2N Strong Biomarker [27]
Seminoma DIS3J8LJ Strong Biomarker [28]
Small lymphocytic lymphoma DIS30POX Strong Genetic Variation [29]
Spinal disease DISQRITY Strong Altered Expression [30]
Systemic lupus erythematosus DISI1SZ7 Strong Altered Expression [31]
Teratoma DIS6ICY4 Strong Posttranslational Modification [32]
Uterine fibroids DISBZRMJ Strong Genetic Variation [16]
Mental disorder DIS3J5R8 moderate Biomarker [21]
Spinal muscular atrophy, type III DISNG3SD moderate Genetic Variation [33]
Germ cell tumor DIS62070 Limited Biomarker [34]
Neuroblastoma DISVZBI4 Limited Biomarker [35]
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⏷ Show the Full List of 44 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
16 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [36]
Doxorubicin DMVP5YE Approved Doxorubicin increases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [37]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [38]
Cisplatin DMRHGI9 Approved Cisplatin decreases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [39]
Hydrogen peroxide DM1NG5W Approved Hydrogen peroxide increases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [40]
Vorinostat DMWMPD4 Approved Vorinostat decreases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [41]
Triclosan DMZUR4N Approved Triclosan decreases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [42]
Folic acid DMEMBJC Approved Folic acid decreases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [43]
Demecolcine DMCZQGK Approved Demecolcine decreases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [44]
Testosterone enanthate DMB6871 Approved Testosterone enanthate affects the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [45]
Atenolol DMNKG1Z Approved Atenolol increases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [46]
SNDX-275 DMH7W9X Phase 3 SNDX-275 affects the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [47]
(+)-JQ1 DM1CZSJ Phase 1 (+)-JQ1 decreases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [49]
Trichostatin A DM9C8NX Investigative Trichostatin A increases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [36]
Formaldehyde DM7Q6M0 Investigative Formaldehyde decreases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [44]
Milchsaure DM462BT Investigative Milchsaure increases the expression of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [52]
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⏷ Show the Full List of 16 Drug(s)
3 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene decreases the methylation of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [48]
PMID28870136-Compound-52 DMFDERP Patented PMID28870136-Compound-52 decreases the phosphorylation of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [50]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the methylation of Small nuclear ribonucleoprotein-associated protein N (SNRPN). [51]
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References

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7 SMN deficiency attenuates migration of U87MG astroglioma cells through the activation of RhoA.Mol Cell Neurosci. 2012 Mar;49(3):282-9. doi: 10.1016/j.mcn.2011.12.003. Epub 2011 Dec 16.
8 Molecular cytogenetic parameters in fibroblasts of ataxia telangiectasia carrier.Cancer Genet Cytogenet. 2004 Sep;153(2):102-7. doi: 10.1016/j.cancergencyto.2003.12.009.
9 Chromosome 15q11-13 duplication syndrome brain reveals epigenetic alterations in gene expression not predicted from copy number.J Med Genet. 2009 Feb;46(2):86-93. doi: 10.1136/jmg.2008.061580. Epub 2008 Oct 7.
10 The autism-related gene SNRPN regulates cortical and spine development via controlling nuclear receptor Nr4a1.Sci Rep. 2016 Jul 19;6:29878. doi: 10.1038/srep29878.
11 The epigenetic imprinting defect of patients with Beckwith-Wiedemann syndrome born after assisted reproductive technology is not restricted to the 11p15 region.J Med Genet. 2006 Dec;43(12):902-7. doi: 10.1136/jmg.2006.042135. Epub 2006 Jul 6.
12 A ligation assay for multiplex analysis of CpG methylation using bisulfite-treated DNA.Nucleic Acids Res. 2007;35(21):e144. doi: 10.1093/nar/gkm984. Epub 2007 Nov 12.
13 SMN gene analysis of the spinal form of Charcot-Marie-Tooth disease.J Med Genet. 1997 Jun;34(6):507-8. doi: 10.1136/jmg.34.6.507.
14 Mining Featured Biomarkers Linked with Epithelial Ovarian CancerBased on Bioinformatics.Diagnostics (Basel). 2019 Apr 9;9(2):39. doi: 10.3390/diagnostics9020039.
15 The Ewing's sarcoma protein interacts with the Tudor domain of the survival motor neuron protein.Brain Res Mol Brain Res. 2003 Nov 6;119(1):37-49. doi: 10.1016/j.molbrainres.2003.08.011.
16 Maintenance of imprinting of the insulin-like growth factor II gene (IGF2) and the small nuclear ribonucleoprotein polypeptide N gene (SNRPN) in the human uterus and leiomyoma.Gynecol Obstet Invest. 1996;41(1):50-4. doi: 10.1159/000292036.
17 Novel Epigenomic Biomarkers of Male Infertility Identified by Methylation Patterns of CpG Sites Within Imprinting Control Regions of H19 and SNRPN Genes.OMICS. 2018 May;22(5):354-364. doi: 10.1089/omi.2018.0019. Epub 2018 Apr 30.
18 Telomere Length-Associated Genetic Variants and the Risk of Thyroid Cancer in Survivors of Childhood Cancer: A Report from the Childhood Cancer Survivor Study (CCSS).Cancer Epidemiol Biomarkers Prev. 2019 Feb;28(2):417-419. doi: 10.1158/1055-9965.EPI-18-0972. Epub 2018 Oct 30.
19 Combined treatment with the histone deacetylase inhibitor LBH589 and a splice-switch antisense oligonucleotide enhances SMN2 splicing and SMN expression in Spinal Muscular Atrophy cells.J Neurochem. 2020 Apr;153(2):264-275. doi: 10.1111/jnc.14935. Epub 2020 Jan 8.
20 Scurfy Mice Develop Features of Connective Tissue Disease Overlap Syndrome and Mixed Connective Tissue Disease in the Absence of Regulatory T Cells.Front Immunol. 2019 Apr 24;10:881. doi: 10.3389/fimmu.2019.00881. eCollection 2019.
21 Sequencing chromosomal abnormalities reveals neurodevelopmental loci that confer risk across diagnostic boundaries.Cell. 2012 Apr 27;149(3):525-37. doi: 10.1016/j.cell.2012.03.028. Epub 2012 Apr 19.
22 Mechanisms of exercise-induced survival motor neuron expression in the skeletal muscle of spinal muscular atrophy-like mice.J Physiol. 2019 Sep;597(18):4757-4778. doi: 10.1113/JP278454. Epub 2019 Aug 22.
23 Polymorphisms in the SNRPN gene are associated with obesity susceptibility in a Spanish population.J Gene Med. 2017 May;19(5). doi: 10.1002/jgm.2956.
24 Common pathways of autoimmune inflammatory myopathies and genetic neuromuscular disorders.Clin Rev Allergy Immunol. 2012 Feb;42(1):16-25. doi: 10.1007/s12016-011-8286-7.
25 Genome-wide differentially methylated genes in prostate cancer tissues from African-American and Caucasian men. Epigenetics. 2015;10(4):319-28.
26 IPLEX administration improves motor neuron survival and ameliorates motor functions in a severe mouse model of spinal muscular atrophy.Mol Med. 2012 Sep 25;18(1):1076-85. doi: 10.2119/molmed.2012.00056.
27 Increased sensorimotor network connectivity associated with clozapine eligibility in people with schizophrenia.Psychiatry Res Neuroimaging. 2018 May 30;275:36-42. doi: 10.1016/j.pscychresns.2018.02.008. Epub 2018 Mar 6.
28 Yolk sac tumor but not seminoma or teratoma is associated with abnormal epigenetic reprogramming pathway and shows frequent hypermethylation of various tumor suppressor genes.Cancer Sci. 2009 Apr;100(4):698-708. doi: 10.1111/j.1349-7006.2009.01102.x. Epub 2009 Feb 24.
29 The influence of different chromosomal aberrations on molecular cytogenetic parameters in chronic lymphocytic leukemia.Cancer Genet Cytogenet. 2006 Jun;167(2):145-9. doi: 10.1016/j.cancergencyto.2005.11.019.
30 Single-Cell Analysis of SMN Reveals Its Broader Role in Neuromuscular Disease.Cell Rep. 2017 Feb 7;18(6):1484-1498. doi: 10.1016/j.celrep.2017.01.035.
31 Enhanced transcription of the gene encoding the SmN autoantigen in patients with systemic lupus erythematosus does not result in enhanced levels of the SmN protein.Autoimmunity. 1994;19(2):81-7. doi: 10.3109/08916939409009535.
32 Genetic analysis results of mature cystic teratomas of the ovary in Taiwan disagree with the previous origin theory of this tumor.Hum Pathol. 2016 Jun;52:128-35. doi: 10.1016/j.humpath.2016.01.011. Epub 2016 Feb 5.
33 A new method for SMN1 and hybrid SMN gene analysis in spinal muscular atrophy using long-range PCR followed by sequencing.J Hum Genet. 2015 May;60(5):233-9. doi: 10.1038/jhg.2015.16. Epub 2015 Feb 26.
34 Multipoint imprinting analysis indicates a common precursor cell for gonadal and nongonadal pediatric germ cell tumors.Cancer Res. 2001 Oct 1;61(19):7268-76.
35 Splicing changes in SMA mouse motoneurons and SMN-depleted neuroblastoma cells: evidence for involvement of splicing regulatory proteins.RNA Biol. 2014;11(11):1430-46. doi: 10.1080/15476286.2014.996494.
36 From transient transcriptome responses to disturbed neurodevelopment: role of histone acetylation and methylation as epigenetic switch between reversible and irreversible drug effects. Arch Toxicol. 2014 Jul;88(7):1451-68.
37 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
38 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
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