General Information of Drug Off-Target (DOT) (ID: OT1DPZAE)

DOT Name Nuclear factor 1 X-type (NFIX)
Synonyms NF1-X; Nuclear factor 1/X; CCAAT-box-binding transcription factor; CTF; Nuclear factor I/X; NF-I/X; NFI-X; TGGCA-binding protein
Gene Name NFIX
Related Disease
Bone development disease ( )
Malan overgrowth syndrome ( )
Marshall-Smith syndrome ( )
Amyloidosis ( )
Breast carcinoma ( )
Dementia ( )
Diabetic kidney disease ( )
Esophageal squamous cell carcinoma ( )
Gastric cancer ( )
Glioma ( )
Herpes simplex infection ( )
Lung adenocarcinoma ( )
Lung squamous cell carcinoma ( )
Neurofibromatosis type 1 ( )
Overgrowth syndrome ( )
Schwannomatosis ( )
Systemic sclerosis ( )
Bipolar disorder ( )
Neuroblastoma ( )
Neurofibromatosis ( )
Hydrocephalus ( )
Intervertebral disc degeneration ( )
Megalencephaly ( )
Neoplasm ( )
Alzheimer disease ( )
Bladder cancer ( )
Epithelial ovarian cancer ( )
Intellectual disability ( )
Marinesco-Sjogren syndrome ( )
Prostate cancer ( )
Prostate carcinoma ( )
Urinary bladder cancer ( )
Urinary bladder neoplasm ( )
UniProt ID
NFIX_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
PDB ID
7QQD; 7QQE
Pfam ID
PF00859 ; PF03165 ; PF10524
Sequence
MYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL
LGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCL
RQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLA
YFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASG
PNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGR
SPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPG
SPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQPN
GSGQGKVPGSFLLPPPPPVARPVPLPMPDSKSTSTAPDGAALTPPSPSFATTGASSANRF
VSIGPRDGNFLNIPQQSQSWFL
Function
Recognizes and binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.
Tissue Specificity Widely expressed.
Reactome Pathway
RNA Polymerase III Abortive And Retractive Initiation (R-HSA-749476 )
RNA Polymerase III Transcription Termination (R-HSA-73980 )

Molecular Interaction Atlas (MIA) of This DOT

33 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Bone development disease DISVKAZS Definitive Genetic Variation [1]
Malan overgrowth syndrome DIS37600 Definitive Autosomal dominant [2]
Marshall-Smith syndrome DIS8BYL7 Definitive Autosomal dominant [2]
Amyloidosis DISHTAI2 Strong Biomarker [3]
Breast carcinoma DIS2UE88 Strong Genetic Variation [4]
Dementia DISXL1WY Strong Biomarker [5]
Diabetic kidney disease DISJMWEY Strong Biomarker [6]
Esophageal squamous cell carcinoma DIS5N2GV Strong Altered Expression [7]
Gastric cancer DISXGOUK Strong Altered Expression [8]
Glioma DIS5RPEH Strong Biomarker [9]
Herpes simplex infection DISL1SAV Strong Altered Expression [10]
Lung adenocarcinoma DISD51WR Strong Altered Expression [11]
Lung squamous cell carcinoma DISXPIBD Strong Altered Expression [11]
Neurofibromatosis type 1 DIS53JH9 Strong Biomarker [12]
Overgrowth syndrome DISHK54G Strong Biomarker [13]
Schwannomatosis DISDWAM1 Strong Biomarker [14]
Systemic sclerosis DISF44L6 Strong Biomarker [15]
Bipolar disorder DISAM7J2 moderate Genetic Variation [16]
Neuroblastoma DISVZBI4 moderate Biomarker [17]
Neurofibromatosis DIS5N2R6 moderate Biomarker [12]
Hydrocephalus DISIZUF7 Disputed Biomarker [18]
Intervertebral disc degeneration DISG3AIM Disputed Biomarker [18]
Megalencephaly DISYW5SV Disputed Genetic Variation [19]
Neoplasm DISZKGEW Disputed Altered Expression [20]
Alzheimer disease DISF8S70 Limited Biomarker [21]
Bladder cancer DISUHNM0 Limited Biomarker [22]
Epithelial ovarian cancer DIS56MH2 Limited Altered Expression [23]
Intellectual disability DISMBNXP Limited Genetic Variation [19]
Marinesco-Sjogren syndrome DISKEU0B Limited Genetic Variation [24]
Prostate cancer DISF190Y Limited Biomarker [22]
Prostate carcinoma DISMJPLE Limited Biomarker [22]
Urinary bladder cancer DISDV4T7 Limited Biomarker [22]
Urinary bladder neoplasm DIS7HACE Limited Biomarker [22]
------------------------------------------------------------------------------------
⏷ Show the Full List of 33 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
This DOT Affected the Drug Response of 2 Drug(s)
Drug Name Drug ID Highest Status Interaction REF
Temozolomide DMKECZD Approved Nuclear factor 1 X-type (NFIX) affects the response to substance of Temozolomide. [47]
DTI-015 DMXZRW0 Approved Nuclear factor 1 X-type (NFIX) affects the response to substance of DTI-015. [47]
------------------------------------------------------------------------------------
4 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate increases the methylation of Nuclear factor 1 X-type (NFIX). [25]
Arsenic DMTL2Y1 Approved Arsenic affects the methylation of Nuclear factor 1 X-type (NFIX). [31]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene affects the methylation of Nuclear factor 1 X-type (NFIX). [40]
PMID28870136-Compound-52 DMFDERP Patented PMID28870136-Compound-52 decreases the phosphorylation of Nuclear factor 1 X-type (NFIX). [43]
------------------------------------------------------------------------------------
19 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of Nuclear factor 1 X-type (NFIX). [26]
Tretinoin DM49DUI Approved Tretinoin decreases the expression of Nuclear factor 1 X-type (NFIX). [27]
Doxorubicin DMVP5YE Approved Doxorubicin decreases the expression of Nuclear factor 1 X-type (NFIX). [28]
Cisplatin DMRHGI9 Approved Cisplatin decreases the expression of Nuclear factor 1 X-type (NFIX). [29]
Estradiol DMUNTE3 Approved Estradiol increases the expression of Nuclear factor 1 X-type (NFIX). [30]
Hydrogen peroxide DM1NG5W Approved Hydrogen peroxide decreases the expression of Nuclear factor 1 X-type (NFIX). [32]
Triclosan DMZUR4N Approved Triclosan increases the expression of Nuclear factor 1 X-type (NFIX). [33]
Methotrexate DM2TEOL Approved Methotrexate increases the expression of Nuclear factor 1 X-type (NFIX). [34]
Decitabine DMQL8XJ Approved Decitabine decreases the expression of Nuclear factor 1 X-type (NFIX). [35]
Marinol DM70IK5 Approved Marinol increases the expression of Nuclear factor 1 X-type (NFIX). [36]
Niclosamide DMJAGXQ Approved Niclosamide increases the expression of Nuclear factor 1 X-type (NFIX). [37]
Bosentan DMIOGBU Approved Bosentan decreases the expression of Nuclear factor 1 X-type (NFIX). [38]
Resveratrol DM3RWXL Phase 3 Resveratrol increases the expression of Nuclear factor 1 X-type (NFIX). [39]
(+)-JQ1 DM1CZSJ Phase 1 (+)-JQ1 decreases the expression of Nuclear factor 1 X-type (NFIX). [41]
PMID28460551-Compound-2 DM4DOUB Patented PMID28460551-Compound-2 decreases the expression of Nuclear factor 1 X-type (NFIX). [42]
UNC0379 DMD1E4J Preclinical UNC0379 decreases the expression of Nuclear factor 1 X-type (NFIX). [44]
Formaldehyde DM7Q6M0 Investigative Formaldehyde increases the expression of Nuclear factor 1 X-type (NFIX). [45]
4-hydroxy-2-nonenal DM2LJFZ Investigative 4-hydroxy-2-nonenal decreases the expression of Nuclear factor 1 X-type (NFIX). [32]
Manganese DMKT129 Investigative Manganese decreases the expression of Nuclear factor 1 X-type (NFIX). [46]
------------------------------------------------------------------------------------
⏷ Show the Full List of 19 Drug(s)

References

1 Variants in nuclear factor I genes influence growth and development.Am J Med Genet C Semin Med Genet. 2019 Dec;181(4):611-626. doi: 10.1002/ajmg.c.31747. Epub 2019 Nov 15.
2 Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020 Feb;22(2):245-257. doi: 10.1038/s41436-019-0686-8. Epub 2019 Nov 6.
3 Age-Related Intraneuronal Aggregation of Amyloid- in Endosomes, Mitochondria, Autophagosomes, and Lysosomes.J Alzheimers Dis. 2020;73(1):229-246. doi: 10.3233/JAD-190835.
4 Association analysis identifies 65 new breast cancer risk loci.Nature. 2017 Nov 2;551(7678):92-94. doi: 10.1038/nature24284. Epub 2017 Oct 23.
5 - but not -secretase proteolysis of APP causes synaptic and memory deficits in a mouse model of dementia.EMBO Mol Med. 2012 Mar;4(3):171-9. doi: 10.1002/emmm.201100195. Epub 2012 Jan 23.
6 Cell adhesion molecule-1 shedding induces apoptosis of renal epithelial cells and exacerbates human nephropathies.Am J Physiol Renal Physiol. 2018 Mar 1;314(3):F388-F398. doi: 10.1152/ajprenal.00385.2017. Epub 2017 Oct 25.
7 MiR-1290 promotes cancer progression by targeting nuclear factor I/X(NFIX) in esophageal squamous cell carcinoma (ESCC).Biomed Pharmacother. 2015 Dec;76:82-93. doi: 10.1016/j.biopha.2015.10.005. Epub 2015 Nov 10.
8 BCL6 degradation caused by the interaction with the C-terminus of pro-HB-EGF induces cyclin D2 expression in gastric cancers.Br J Cancer. 2009 Apr 21;100(8):1320-9. doi: 10.1038/sj.bjc.6605010. Epub 2009 Mar 31.
9 NFIX Circular RNA Promotes Glioma Progression by Regulating miR-34a-5p via Notch Signaling Pathway.Front Mol Neurosci. 2018 Jul 18;11:225. doi: 10.3389/fnmol.2018.00225. eCollection 2018.
10 Two transcriptional activators, CCAAT-box-binding transcription factor and heat shock transcription factor, interact with a human hsp70 gene promoter.Mol Cell Biol. 1987 Mar;7(3):1129-38. doi: 10.1128/mcb.7.3.1129-1138.1987.
11 NFIX downregulation independently predicts poor prognosis in lung adenocarcinoma, but not in squamous cell carcinoma.Future Oncol. 2018 Dec;14(30):3135-3144. doi: 10.2217/fon-2018-0164. Epub 2018 Nov 12.
12 Characterization and utilization of an international neurofibromatosis web-based, patient-entered registry: An observational study.PLoS One. 2017 Jun 23;12(6):e0178639. doi: 10.1371/journal.pone.0178639. eCollection 2017.
13 NFIX mutations affecting the DNA-binding domain cause a peculiar overgrowth syndrome (Malan syndrome): a new patients series.Eur J Med Genet. 2015 Sep;58(9):488-91. doi: 10.1016/j.ejmg.2015.06.009. Epub 2015 Jul 17.
14 CTF meeting 2012: Translation of the basic understanding of the biology and genetics of NF1, NF2, and schwannomatosis toward the development of effective therapies.Am J Med Genet A. 2014 Mar;164A(3):563-78. doi: 10.1002/ajmg.a.36312. Epub 2014 Jan 17.
15 CCAAT binding transcription factor binds and regulates human COL1A1 promoter activity in human dermal fibroblasts: demonstration of increased binding in systemic sclerosis fibroblasts.Arthritis Rheum. 2000 Oct;43(10):2219-29. doi: 10.1002/1529-0131(200010)43:10<2219::AID-ANR9>3.0.CO;2-N.
16 A genome-wide association study identifies two novel susceptibility loci and trans population polygenicity associated with bipolar disorder.Mol Psychiatry. 2018 Mar;23(3):639-647. doi: 10.1038/mp.2016.259. Epub 2017 Jan 24.
17 Evidence that intramolecular associations between presenilin domains are obligatory for endoproteolytic processing.J Biol Chem. 1999 May 14;274(20):13818-23. doi: 10.1074/jbc.274.20.13818.
18 Nuclear factor I X deficiency causes brain malformation and severe skeletal defects. Mol Cell Biol. 2007 May;27(10):3855-3867. doi: 10.1128/MCB.02293-06.
19 19p13 microduplications encompassing NFIX are responsible for intellectual disability, short stature and small head circumference.Eur J Hum Genet. 2018 Jan;26(1):85-93. doi: 10.1038/s41431-017-0037-7. Epub 2017 Nov 28.
20 Targeted therapy of DNA tumor virus-associated cancers using virus-activated transcription factors.Mol Ther. 2006 May;13(5):899-909. doi: 10.1016/j.ymthe.2005.11.023. Epub 2006 Feb 3.
21 NRBF2 is involved in the autophagic degradation process of APP-CTFs in Alzheimer disease models.Autophagy. 2017;13(12):2028-2040. doi: 10.1080/15548627.2017.1379633.
22 Androgen receptor suppresses prostate cancer metastasis but promotes bladder cancer metastasis via differentially altering miRNA525-5p/SLPI-mediated vasculogenic mimicry formation.Cancer Lett. 2020 Mar 31;473:118-129. doi: 10.1016/j.canlet.2019.12.018. Epub 2019 Dec 13.
23 NF-YA underlies EZH2 upregulation and is essential for proliferation of human epithelial ovarian cancer cells.Mol Cancer Res. 2013 Apr;11(4):360-9. doi: 10.1158/1541-7786.MCR-12-0661. Epub 2013 Jan 29.
24 Malan syndrome: Extension of genotype and phenotype spectrum.Am J Med Genet A. 2018 Dec;176(12):2896-2900. doi: 10.1002/ajmg.a.40663. Epub 2018 Dec 10.
25 Integrative omics data analyses of repeated dose toxicity of valproic acid in vitro reveal new mechanisms of steatosis induction. Toxicology. 2018 Jan 15;393:160-170.
26 Integrating multiple omics to unravel mechanisms of Cyclosporin A induced hepatotoxicity in vitro. Toxicol In Vitro. 2015 Apr;29(3):489-501.
27 Transcriptional and Metabolic Dissection of ATRA-Induced Granulocytic Differentiation in NB4 Acute Promyelocytic Leukemia Cells. Cells. 2020 Nov 5;9(11):2423. doi: 10.3390/cells9112423.
28 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
29 Activation of AIFM2 enhances apoptosis of human lung cancer cells undergoing toxicological stress. Toxicol Lett. 2016 Sep 6;258:227-236.
30 17-Estradiol Activates HSF1 via MAPK Signaling in ER-Positive Breast Cancer Cells. Cancers (Basel). 2019 Oct 11;11(10):1533. doi: 10.3390/cancers11101533.
31 Prenatal arsenic exposure and the epigenome: identifying sites of 5-methylcytosine alterations that predict functional changes in gene expression in newborn cord blood and subsequent birth outcomes. Toxicol Sci. 2015 Jan;143(1):97-106. doi: 10.1093/toxsci/kfu210. Epub 2014 Oct 10.
32 Microarray analysis of H2O2-, HNE-, or tBH-treated ARPE-19 cells. Free Radic Biol Med. 2002 Nov 15;33(10):1419-32.
33 Transcriptome and DNA methylome dynamics during triclosan-induced cardiomyocyte differentiation toxicity. Stem Cells Int. 2018 Oct 29;2018:8608327.
34 Global molecular effects of tocilizumab therapy in rheumatoid arthritis synovium. Arthritis Rheumatol. 2014 Jan;66(1):15-23.
35 DNA methylation inhibits p53-mediated survivin repression. Oncogene. 2009 May 14;28(19):2046-50. doi: 10.1038/onc.2009.62. Epub 2009 Apr 13.
36 THC exposure of human iPSC neurons impacts genes associated with neuropsychiatric disorders. Transl Psychiatry. 2018 Apr 25;8(1):89. doi: 10.1038/s41398-018-0137-3.
37 Mitochondrial Uncoupling Induces Epigenome Remodeling and Promotes Differentiation in Neuroblastoma. Cancer Res. 2023 Jan 18;83(2):181-194. doi: 10.1158/0008-5472.CAN-22-1029.
38 Omics-based responses induced by bosentan in human hepatoma HepaRG cell cultures. Arch Toxicol. 2018 Jun;92(6):1939-1952.
39 Interactive gene expression pattern in prostate cancer cells exposed to phenolic antioxidants. Life Sci. 2002 Mar 1;70(15):1821-39.
40 Air pollution and DNA methylation alterations in lung cancer: A systematic and comparative study. Oncotarget. 2017 Jan 3;8(1):1369-1391. doi: 10.18632/oncotarget.13622.
41 Inhibition of BRD4 attenuates tumor cell self-renewal and suppresses stem cell signaling in MYC driven medulloblastoma. Oncotarget. 2014 May 15;5(9):2355-71.
42 Cell-based two-dimensional morphological assessment system to predict cancer drug-induced cardiotoxicity using human induced pluripotent stem cell-derived cardiomyocytes. Toxicol Appl Pharmacol. 2019 Nov 15;383:114761. doi: 10.1016/j.taap.2019.114761. Epub 2019 Sep 15.
43 Quantitative phosphoproteomics reveal cellular responses from caffeine, coumarin and quercetin in treated HepG2 cells. Toxicol Appl Pharmacol. 2022 Aug 15;449:116110. doi: 10.1016/j.taap.2022.116110. Epub 2022 Jun 7.
44 Epigenetic siRNA and chemical screens identify SETD8 inhibition as a therapeutic strategy for p53 activation in high-risk neuroblastoma. Cancer Cell. 2017 Jan 9;31(1):50-63.
45 Cellular reactions to long-term volatile organic compound (VOC) exposures. Sci Rep. 2016 Dec 1;6:37842. doi: 10.1038/srep37842.
46 Gene expression profiling of human primary astrocytes exposed to manganese chloride indicates selective effects on several functions of the cells. Neurotoxicology. 2007 May;28(3):478-89.
47 Tumor necrosis factor-alpha-induced protein 3 as a putative regulator of nuclear factor-kappaB-mediated resistance to O6-alkylating agents in human glioblastomas. J Clin Oncol. 2006 Jan 10;24(2):274-87. doi: 10.1200/JCO.2005.02.9405. Epub 2005 Dec 19.