General Information of Drug Off-Target (DOT) (ID: OTZA82J1)

DOT Name Receptor-type tyrosine-protein phosphatase alpha (PTPRA)
Synonyms Protein-tyrosine phosphatase alpha; R-PTP-alpha; EC 3.1.3.48
Gene Name PTPRA
Related Disease
B-cell neoplasm ( )
Gastric neoplasm ( )
Melanoma ( )
Myocardial infarction ( )
Neuroblastoma ( )
Acute leukaemia ( )
Acute lymphocytic leukaemia ( )
Acute monocytic leukemia ( )
Adult T-cell leukemia/lymphoma ( )
Astrocytoma ( )
Autism spectrum disorder ( )
Breast carcinoma ( )
Breast neoplasm ( )
Childhood acute lymphoblastic leukemia ( )
Colorectal carcinoma ( )
Coronary atherosclerosis ( )
Endometrial carcinoma ( )
Esophageal cancer ( )
Hyperinsulinemia ( )
leukaemia ( )
Leukemia ( )
Lung neoplasm ( )
Medulloblastoma ( )
Myocardial ischemia ( )
Pancreatic cancer ( )
Plasma cell myeloma ( )
Skin disease ( )
T-cell leukaemia ( )
Triple negative breast cancer ( )
Acute myelogenous leukaemia ( )
Breast cancer ( )
Carcinoma ( )
Periodontitis ( )
Small-cell lung cancer ( )
Tuberculosis ( )
Adult lymphoma ( )
Brain neoplasm ( )
Coronary heart disease ( )
Glioma ( )
Lung squamous cell carcinoma ( )
Lymphoma ( )
Non-small-cell lung cancer ( )
Parkinson disease ( )
Pediatric lymphoma ( )
Prostate cancer ( )
Prostate carcinoma ( )
UniProt ID
PTPRA_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
PDB ID
6UZT
EC Number
3.1.3.48
Pfam ID
PF00102
Sequence
MDSWFILVLLGSGLICVSANNATTVAPSVGITRLINSSTAEPVKEEAKTSNPTSSLTSLS
VAPTFSPNITLGPTYLTTVNSSDSDNGTTRTASTNSIGITISPNGTWLPDNQFTDARTEP
WEGNSSTAATTPETFPPSGNSDSKDRRDETPIIAVMVALSSLLVIVFIIIVLYMLRFKKY
KQAGSHSNSFRLSNGRTEDVEPQSVPLLARSPSTNRKYPPLPVDKLEEEINRRMADDNKL
FREEFNALPACPIQATCEAASKEENKEKNRYVNILPYDHSRVHLTPVEGVPDSDYINASF
INGYQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKECKCAQYWPDQGCW
TYGNIRVSVEDVTVLVDYTVRKFCIQQVGDMTNRKPQRLITQFHFTSWPDFGVPFTPIGM
LKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHTERKVDVYGFVSRIRAQ
RCQMVQTDMQYVFIYQALLEHYLYGDTELEVTSLETHLQKIYNKIPGTSNNGLEEEFKKL
TSIKIQNDKMRTGNLPANMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDGYRQK
DSYIASQGPLLHTIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWPSDGLVSYGDITV
ELKKEEECESYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMISIIAAVQKQQ
QQSGNHPITVHCSAGAGRTGTFCALSTVLERVKAEGILDVFQTVKSLRLQRPHMVQTLEQ
YEFCYKVVQEYIDAFSDYANFK
Function
Tyrosine protein phosphatase which is involved in integrin-mediated focal adhesion formation. Following integrin engagement, specifically recruits BCAR3, BCAR1 and CRK to focal adhesions thereby promoting SRC-mediated phosphorylation of BRAC1 and the subsequent activation of PAK and small GTPase RAC1 and CDC42.
Reactome Pathway
RAF/MAP kinase cascade (R-HSA-5673001 )
NCAM signaling for neurite out-growth (R-HSA-375165 )

Molecular Interaction Atlas (MIA) of This DOT

46 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
B-cell neoplasm DISVY326 Definitive Altered Expression [1]
Gastric neoplasm DISOKN4Y Definitive Biomarker [2]
Melanoma DIS1RRCY Definitive Biomarker [3]
Myocardial infarction DIS655KI Definitive Genetic Variation [4]
Neuroblastoma DISVZBI4 Definitive Biomarker [5]
Acute leukaemia DISDQFDI Strong Biomarker [6]
Acute lymphocytic leukaemia DISPX75S Strong Biomarker [7]
Acute monocytic leukemia DIS28NEL Strong Biomarker [8]
Adult T-cell leukemia/lymphoma DIS882XU Strong Biomarker [9]
Astrocytoma DISL3V18 Strong Altered Expression [10]
Autism spectrum disorder DISXK8NV Strong Biomarker [11]
Breast carcinoma DIS2UE88 Strong Biomarker [12]
Breast neoplasm DISNGJLM Strong Altered Expression [13]
Childhood acute lymphoblastic leukemia DISJ5D6U Strong Biomarker [7]
Colorectal carcinoma DIS5PYL0 Strong Biomarker [14]
Coronary atherosclerosis DISKNDYU Strong Genetic Variation [15]
Endometrial carcinoma DISXR5CY Strong Altered Expression [16]
Esophageal cancer DISGB2VN Strong Altered Expression [17]
Hyperinsulinemia DISIDWT6 Strong Genetic Variation [18]
leukaemia DISS7D1V Strong Biomarker [19]
Leukemia DISNAKFL Strong Biomarker [19]
Lung neoplasm DISVARNB Strong Altered Expression [20]
Medulloblastoma DISZD2ZL Strong Altered Expression [10]
Myocardial ischemia DISFTVXF Strong Biomarker [21]
Pancreatic cancer DISJC981 Strong Biomarker [5]
Plasma cell myeloma DIS0DFZ0 Strong Biomarker [22]
Skin disease DISDW8R6 Strong Biomarker [23]
T-cell leukaemia DISJ6YIF Strong Biomarker [9]
Triple negative breast cancer DISAMG6N Strong Biomarker [24]
Acute myelogenous leukaemia DISCSPTN moderate Biomarker [25]
Breast cancer DIS7DPX1 moderate Biomarker [12]
Carcinoma DISH9F1N moderate Biomarker [26]
Periodontitis DISI9JOI moderate Biomarker [27]
Small-cell lung cancer DISK3LZD moderate Biomarker [28]
Tuberculosis DIS2YIMD Disputed Biomarker [29]
Adult lymphoma DISK8IZR Limited Biomarker [30]
Brain neoplasm DISY3EKS Limited Biomarker [31]
Coronary heart disease DIS5OIP1 Limited Genetic Variation [32]
Glioma DIS5RPEH Limited Biomarker [31]
Lung squamous cell carcinoma DISXPIBD Limited Biomarker [33]
Lymphoma DISN6V4S Limited Biomarker [30]
Non-small-cell lung cancer DIS5Y6R9 Limited Altered Expression [34]
Parkinson disease DISQVHKL Limited Genetic Variation [35]
Pediatric lymphoma DIS51BK2 Limited Biomarker [30]
Prostate cancer DISF190Y Limited Altered Expression [36]
Prostate carcinoma DISMJPLE Limited Altered Expression [36]
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⏷ Show the Full List of 46 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
14 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [37]
Tretinoin DM49DUI Approved Tretinoin increases the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [38]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [39]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [40]
Hydrogen peroxide DM1NG5W Approved Hydrogen peroxide affects the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [41]
Vorinostat DMWMPD4 Approved Vorinostat decreases the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [42]
Menadione DMSJDTY Approved Menadione affects the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [41]
Nicotine DMWX5CO Approved Nicotine decreases the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [43]
Cocaine DMSOX7I Approved Cocaine decreases the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [44]
Mecamylamine DMGQFYB Approved Mecamylamine decreases the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [43]
Urethane DM7NSI0 Phase 4 Urethane increases the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [45]
Resveratrol DM3RWXL Phase 3 Resveratrol decreases the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [46]
Geldanamycin DMS7TC5 Discontinued in Phase 2 Geldanamycin increases the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [49]
Trichostatin A DM9C8NX Investigative Trichostatin A decreases the expression of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [51]
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⏷ Show the Full List of 14 Drug(s)
3 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene affects the methylation of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [47]
PMID28870136-Compound-52 DMFDERP Patented PMID28870136-Compound-52 affects the phosphorylation of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [48]
Bisphenol A DM2ZLD7 Investigative Bisphenol A decreases the methylation of Receptor-type tyrosine-protein phosphatase alpha (PTPRA). [50]
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References

1 Immunohistochemical analyses of phosphatases in childhood B-cell lymphoma: lower expression of PTEN and HePTP and higher number of positive cells for nuclear SHP2 in B-cell lymphoma cases compared to controls.Pediatr Hematol Oncol. 2008 Sep;25(6):528-40. doi: 10.1080/08880010802237054.
2 Protein tyrosine-phosphatase expression profiling in gastric cancer tissues.Cancer Lett. 2006 Oct 8;242(1):95-103. doi: 10.1016/j.canlet.2005.10.046. Epub 2005 Dec 7.
3 siRNA - Mediated LRP/LR knock-down reduces cellular viability of malignant melanoma cells through the activation of apoptotic caspases.Exp Cell Res. 2018 Jul 1;368(1):1-12. doi: 10.1016/j.yexcr.2018.04.003. Epub 2018 Apr 10.
4 Low-density lipoprotein receptor-related protein in atherosclerosis development: up-regulation of gene expression in patients with coronary obstruction.J Mol Med (Berl). 1998 Jul;76(8):596-600. doi: 10.1007/s001090050255.
5 Knockdown of LRP/LR induces apoptosis in pancreatic cancer and neuroblastoma cells through activation of caspases.Exp Cell Res. 2017 Nov 15;360(2):264-272. doi: 10.1016/j.yexcr.2017.09.016. Epub 2017 Sep 10.
6 Evaluation of multidrug resistance in 46 newly diagnosed patients with acute leukemia.Hematology. 2012 Mar;17(2):59-65. doi: 10.1179/102453312X13221316477570.
7 Expression of genes related to multiple drug resistance and apoptosis in acute leukemia: response to induction chemotherapy.Exp Mol Pathol. 2012 Feb;92(1):44-9. doi: 10.1016/j.yexmp.2011.09.004. Epub 2011 Oct 19.
8 Increased expression of the breast cancer resistance protein (BCRP) in relapsed or refractory acute myeloid leukemia (AML).Leukemia. 2002 May;16(5):833-9. doi: 10.1038/sj.leu.2402496.
9 Human T-cell lymphotropic virus type I Tax activates lung resistance-related protein expression in leukemic clones established from an adult T-cell leukemia patient.Exp Hematol. 2002 Apr;30(4):340-5. doi: 10.1016/s0301-472x(02)00775-0.
10 Quantitative PCR analysis of the expression profile of genes related to multiple drug resistance in tumors of the central nervous system.J Neurooncol. 2007 Oct;85(1):1-10. doi: 10.1007/s11060-007-9382-7. Epub 2007 Apr 12.
11 Resequencing and association analysis of PTPRA, a possible susceptibility gene for schizophrenia and autism spectrum disorders.PLoS One. 2014 Nov 13;9(11):e112531. doi: 10.1371/journal.pone.0112531. eCollection 2014.
12 Dual-targeting Wnt and uPA receptors using peptide conjugated ultra-small nanoparticle drug carriers inhibited cancer stem-cell phenotype in chemo-resistant breast cancer.Biomaterials. 2018 Jan;152:47-62. doi: 10.1016/j.biomaterials.2017.10.035. Epub 2017 Oct 21.
13 Both LRP5 and LRP6 receptors are required to respond to physiological Wnt ligands in mammary epithelial cells and fibroblasts.J Biol Chem. 2012 May 11;287(20):16454-66. doi: 10.1074/jbc.M112.362137. Epub 2012 Mar 20.
14 Knock-down of LRP/LR promotes apoptosis in early and late stage colorectal carcinoma cells via caspase activation.BMC Cancer. 2018 May 29;18(1):602. doi: 10.1186/s12885-018-4531-2.
15 Association between triglyceride-rich lipoprotein remnant receptor polymorphisms and lipid traits.Clin Biochem. 2000 Aug;33(6):441-7. doi: 10.1016/s0009-9120(00)00139-9.
16 Differential expression of the alpha(2)-macroglobulin receptor and the receptor associated protein in normal human endometrium and endometrial carcinoma.Mol Hum Reprod. 2000 Oct;6(10):921-7. doi: 10.1093/molehr/6.10.921.
17 Knockdown of LRP/LR Induces Apoptosis in Breast and Oesophageal Cancer Cells.PLoS One. 2015 Oct 1;10(10):e0139584. doi: 10.1371/journal.pone.0139584. eCollection 2015.
18 Insulin signaling and glucose homeostasis in mice lacking protein tyrosine phosphatase alpha.Biochem Biophys Res Commun. 2004 Feb 6;314(2):321-9. doi: 10.1016/j.bbrc.2003.12.087.
19 Predictive value of multidrug resistance proteins and cellular drug resistance in childhood relapsed acute lymphoblastic leukemia.J Cancer Res Clin Oncol. 2007 Nov;133(11):875-93. doi: 10.1007/s00432-007-0274-1. Epub 2007 Aug 2.
20 Expression of lung-resistance protein gene is not associated with platinum drug exposure in lung cancer.Anticancer Res. 1998 Nov-Dec;18(6A):4159-62.
21 Cardioplegia prevents ischemia-induced transcriptional alterations of cytoprotective genes in rat hearts: a DNA microarray study.J Thorac Cardiovasc Surg. 2005 Oct;130(4):1151. doi: 10.1016/j.jtcvs.2005.06.027.
22 Molecular chaperone gp96 is a novel therapeutic target of multiple myeloma.Clin Cancer Res. 2013 Nov 15;19(22):6242-51. doi: 10.1158/1078-0432.CCR-13-2083. Epub 2013 Sep 27.
23 From Probiotic to Prebiotic Using Thermal Spring Water.J Drugs Dermatol. 2018 Jun 1;17(6):657-662.
24 HePTP promotes migration and invasion in triple-negative breast cancer cells via activation of Wnt/-catenin signaling.Biomed Pharmacother. 2019 Oct;118:109361. doi: 10.1016/j.biopha.2019.109361. Epub 2019 Aug 23.
25 MRP1 protein expression in leukemic stem cells as a negative prognostic marker in acute myeloid leukemia patients.Eur J Haematol. 2017 Nov;99(5):415-422. doi: 10.1111/ejh.12938. Epub 2017 Sep 29.
26 Markers of drug resistance in relapsing colon cancer.J Cancer Res Clin Oncol. 2002 Feb;128(2):114-8. doi: 10.1007/s00432-001-0310-5. Epub 2001 Nov 30.
27 Role of PTP in the destruction of periodontal connective tissues.PLoS One. 2013 Aug 5;8(8):e70659. doi: 10.1371/journal.pone.0070659. Print 2013.
28 Detection of drug-resistance genes using single bronchoscopy biopsy specimens.Oncol Rep. 2007 Sep;18(3):703-8.
29 Diagnostic luciferase reporter phage assay for active and non-replicating persistors to detect tubercle bacilli from sputum samples.Clin Microbiol Infect. 2012 May;18(5):492-6. doi: 10.1111/j.1469-0691.2011.03592.x. Epub 2011 Aug 16.
30 New silicon compounds as resistance modifiers against multidrug-resistant cancer cells.Anticancer Res. 2004 Mar-Apr;24(2B):865-71.
31 Low density lipoprotein receptor related protein gene amplification and 766T polymorphism in astrocytomas.Neurosci Lett. 1998 Oct 30;256(1):5-8. doi: 10.1016/s0304-3940(98)00734-4.
32 Influence of exonic polymorphisms in the gene for LDL receptor-related protein (LRP) on risk of coronary artery disease.Atherosclerosis. 2003 May;168(1):115-21. doi: 10.1016/s0021-9150(03)00087-x.
33 Increased PTPRA expression leads to poor prognosis through c-Src activation and G1 phase progression in squamous cell lung cancer.Int J Oncol. 2017 Aug;51(2):489-497. doi: 10.3892/ijo.2017.4055. Epub 2017 Jun 23.
34 Prognostic significance of miR-23b in combination with P-gp, MRP and LRP/MVP expression in non-small cell lung cancer.Neoplasma. 2016;63(4):576-87. doi: 10.4149/neo_2016_411.
35 Low-density lipoprotein receptor-related protein (LRP) gene 766T polymorphism and Parkinson's disease.Mov Disord. 1999 Sep;14(5):839-41. doi: 10.1002/1531-8257(199909)14:5<839::aid-mds1019>3.0.co;2-v.
36 Chemotherapy sensitivity recovery of prostate cancer cells by functional inhibition and knock down of multidrug resistance proteins.Prostate. 2011 Dec;71(16):1810-7. doi: 10.1002/pros.21398. Epub 2011 Apr 7.
37 Human embryonic stem cell-derived test systems for developmental neurotoxicity: a transcriptomics approach. Arch Toxicol. 2013 Jan;87(1):123-43.
38 Phenotypic characterization of retinoic acid differentiated SH-SY5Y cells by transcriptional profiling. PLoS One. 2013 May 28;8(5):e63862.
39 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
40 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
41 Global gene expression analysis reveals differences in cellular responses to hydroxyl- and superoxide anion radical-induced oxidative stress in caco-2 cells. Toxicol Sci. 2010 Apr;114(2):193-203. doi: 10.1093/toxsci/kfp309. Epub 2009 Dec 31.
42 Definition of transcriptome-based indices for quantitative characterization of chemically disturbed stem cell development: introduction of the STOP-Toxukn and STOP-Toxukk tests. Arch Toxicol. 2017 Feb;91(2):839-864.
43 Nicotine modulates the expression of a diverse set of genes in the neuronal SH-SY5Y cell line. J Biol Chem. 2003 May 2;278(18):15633-40.
44 Transcriptional profiling in the human prefrontal cortex: evidence for two activational states associated with cocaine abuse. Pharmacogenomics J. 2003;3(1):27-40.
45 Ethyl carbamate induces cell death through its effects on multiple metabolic pathways. Chem Biol Interact. 2017 Nov 1;277:21-32.
46 Differential expression of genes induced by resveratrol in LNCaP cells: P53-mediated molecular targets. Int J Cancer. 2003 Mar 20;104(2):204-12.
47 Air pollution and DNA methylation alterations in lung cancer: A systematic and comparative study. Oncotarget. 2017 Jan 3;8(1):1369-1391. doi: 10.18632/oncotarget.13622.
48 Quantitative phosphoproteomics reveal cellular responses from caffeine, coumarin and quercetin in treated HepG2 cells. Toxicol Appl Pharmacol. 2022 Aug 15;449:116110. doi: 10.1016/j.taap.2022.116110. Epub 2022 Jun 7.
49 Identification of transcriptome signatures and biomarkers specific for potential developmental toxicants inhibiting human neural crest cell migration. Arch Toxicol. 2016 Jan;90(1):159-80.
50 DNA methylome-wide alterations associated with estrogen receptor-dependent effects of bisphenols in breast cancer. Clin Epigenetics. 2019 Oct 10;11(1):138. doi: 10.1186/s13148-019-0725-y.
51 From transient transcriptome responses to disturbed neurodevelopment: role of histone acetylation and methylation as epigenetic switch between reversible and irreversible drug effects. Arch Toxicol. 2014 Jul;88(7):1451-68.