General Information of Drug Off-Target (DOT) (ID: OTDGQAD1)

DOT Name Metalloproteinase inhibitor 3 (TIMP3)
Synonyms Protein MIG-5; Tissue inhibitor of metalloproteinases 3; TIMP-3
Gene Name TIMP3
Related Disease
Psoriasis ( )
Retinopathy ( )
Sorsby fundus dystrophy ( )
Acute myelogenous leukaemia ( )
Adenocarcinoma ( )
Advanced cancer ( )
Asthma ( )
Bladder cancer ( )
Blindness ( )
Bone osteosarcoma ( )
Breast cancer ( )
Breast carcinoma ( )
Breast neoplasm ( )
Colitis ( )
Colorectal carcinoma ( )
Diabetic kidney disease ( )
Esophageal squamous cell carcinoma ( )
Gastric cancer ( )
Head-neck squamous cell carcinoma ( )
Hepatocellular carcinoma ( )
Meningioma ( )
Metastatic malignant neoplasm ( )
Myocardial infarction ( )
Non-small-cell lung cancer ( )
Osteoarthritis ( )
Osteosarcoma ( )
Periodontitis ( )
Rheumatoid arthritis ( )
Squamous cell carcinoma ( )
Thyroid gland papillary carcinoma ( )
Urinary bladder cancer ( )
Urinary bladder neoplasm ( )
Gastric neoplasm ( )
Lung cancer ( )
Lung carcinoma ( )
Stomach cancer ( )
Melanoma ( )
Arteriosclerosis ( )
Atherosclerosis ( )
Bladder disease ( )
Carcinoma ( )
Clear cell renal carcinoma ( )
Glioblastoma multiforme ( )
Hereditary diffuse gastric adenocarcinoma ( )
Renal cell carcinoma ( )
Schistosomiasis ( )
Type-1/2 diabetes ( )
UniProt ID
TIMP3_HUMAN
3D Structure
Download
2D Sequence (FASTA)
Download
3D Structure (PDB)
Download
PDB ID
3CKI
Pfam ID
PF00965
Sequence
MTPWLGLIVLLGSWSLGDWGAEACTCSPSHPQDAFCNSDIVIRAKVVGKKLVKEGPFGTL
VYTIKQMKMYRGFTKMPHVQYIHTEASESLCGLKLEVNKYQYLLTGRVYDGKMYTGLCNF
VERWDQLTLSQRKGLNYRYHLGCNCKIKSCYYLPCFVTSKNECLWTDMLSNFGYPGYQSK
HYACIRQKGGYCSWYRGWAPPDKSIINATDP
Function
Complexes with metalloproteinases (such as collagenases) and irreversibly inactivates them by binding to their catalytic zinc cofactor. May form part of a tissue-specific acute response to remodeling stimuli. Known to act on MMP-1, MMP-2, MMP-3, MMP-7, MMP-9, MMP-13, MMP-14 and MMP-15.
KEGG Pathway
Proteoglycans in cancer (hsa05205 )
MicroR.s in cancer (hsa05206 )
Reactome Pathway
Platelet degranulation (R-HSA-114608 )

Molecular Interaction Atlas (MIA) of This DOT

47 Disease(s) Related to This DOT
Disease Name Disease ID Evidence Level Mode of Inheritance REF
Psoriasis DIS59VMN Definitive Biomarker [1]
Retinopathy DISB4B0F Definitive Genetic Variation [2]
Sorsby fundus dystrophy DISFVBJE Definitive Autosomal dominant [3]
Acute myelogenous leukaemia DISCSPTN Strong Biomarker [4]
Adenocarcinoma DIS3IHTY Strong Biomarker [5]
Advanced cancer DISAT1Z9 Strong Biomarker [6]
Asthma DISW9QNS Strong Biomarker [7]
Bladder cancer DISUHNM0 Strong Genetic Variation [8]
Blindness DISTIM10 Strong Altered Expression [9]
Bone osteosarcoma DIST1004 Strong Altered Expression [10]
Breast cancer DIS7DPX1 Strong Posttranslational Modification [11]
Breast carcinoma DIS2UE88 Strong Posttranslational Modification [11]
Breast neoplasm DISNGJLM Strong Genetic Variation [12]
Colitis DISAF7DD Strong Biomarker [13]
Colorectal carcinoma DIS5PYL0 Strong Genetic Variation [6]
Diabetic kidney disease DISJMWEY Strong Altered Expression [14]
Esophageal squamous cell carcinoma DIS5N2GV Strong Biomarker [15]
Gastric cancer DISXGOUK Strong Posttranslational Modification [16]
Head-neck squamous cell carcinoma DISF7P24 Strong Genetic Variation [17]
Hepatocellular carcinoma DIS0J828 Strong Biomarker [18]
Meningioma DISPT4TG Strong Biomarker [19]
Metastatic malignant neoplasm DIS86UK6 Strong Biomarker [20]
Myocardial infarction DIS655KI Strong Biomarker [21]
Non-small-cell lung cancer DIS5Y6R9 Strong Altered Expression [22]
Osteoarthritis DIS05URM Strong Altered Expression [23]
Osteosarcoma DISLQ7E2 Strong Altered Expression [10]
Periodontitis DISI9JOI Strong Altered Expression [24]
Rheumatoid arthritis DISTSB4J Strong Biomarker [25]
Squamous cell carcinoma DISQVIFL Strong Posttranslational Modification [26]
Thyroid gland papillary carcinoma DIS48YMM Strong Altered Expression [27]
Urinary bladder cancer DISDV4T7 Strong Genetic Variation [8]
Urinary bladder neoplasm DIS7HACE Strong Genetic Variation [8]
Gastric neoplasm DISOKN4Y moderate Biomarker [28]
Lung cancer DISCM4YA moderate Biomarker [29]
Lung carcinoma DISTR26C moderate Biomarker [29]
Stomach cancer DISKIJSX moderate Posttranslational Modification [16]
Melanoma DIS1RRCY Disputed Altered Expression [30]
Arteriosclerosis DISK5QGC Limited Biomarker [31]
Atherosclerosis DISMN9J3 Limited Biomarker [31]
Bladder disease DISTVIQI Limited Biomarker [32]
Carcinoma DISH9F1N Limited Altered Expression [33]
Clear cell renal carcinoma DISBXRFJ Limited Biomarker [34]
Glioblastoma multiforme DISK8246 Limited Biomarker [35]
Hereditary diffuse gastric adenocarcinoma DISUIBYS Limited Biomarker [36]
Renal cell carcinoma DISQZ2X8 Limited Biomarker [34]
Schistosomiasis DIS6PD44 Limited Biomarker [32]
Type-1/2 diabetes DISIUHAP Limited Altered Expression [37]
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⏷ Show the Full List of 47 Disease(s)
Molecular Interaction Atlas (MIA) Jump to Detail Molecular Interaction Atlas of This DOT
This DOT Affected the Drug Response of 2 Drug(s)
Drug Name Drug ID Highest Status Interaction REF
Cytarabine DMZD5QR Approved Metalloproteinase inhibitor 3 (TIMP3) decreases the response to substance of Cytarabine. [79]
Floxuridine DM04LR2 Approved Metalloproteinase inhibitor 3 (TIMP3) decreases the response to substance of Floxuridine. [79]
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2 Drug(s) Affected the Post-Translational Modifications of This DOT
Drug Name Drug ID Highest Status Interaction REF
Valproate DMCFE9I Approved Valproate decreases the methylation of Metalloproteinase inhibitor 3 (TIMP3). [38]
Bisphenol A DM2ZLD7 Investigative Bisphenol A increases the methylation of Metalloproteinase inhibitor 3 (TIMP3). [71]
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41 Drug(s) Affected the Gene/Protein Processing of This DOT
Drug Name Drug ID Highest Status Interaction REF
Ciclosporin DMAZJFX Approved Ciclosporin decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [39]
Tretinoin DM49DUI Approved Tretinoin increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [40]
Acetaminophen DMUIE76 Approved Acetaminophen decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [41]
Doxorubicin DMVP5YE Approved Doxorubicin decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [42]
Cupric Sulfate DMP0NFQ Approved Cupric Sulfate decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [43]
Estradiol DMUNTE3 Approved Estradiol decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [44]
Ivermectin DMDBX5F Approved Ivermectin decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [45]
Arsenic trioxide DM61TA4 Approved Arsenic trioxide increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [46]
Calcitriol DM8ZVJ7 Approved Calcitriol decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [47]
Vorinostat DMWMPD4 Approved Vorinostat decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [48]
Triclosan DMZUR4N Approved Triclosan decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [49]
Methotrexate DM2TEOL Approved Methotrexate increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [50]
Decitabine DMQL8XJ Approved Decitabine increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [36]
Selenium DM25CGV Approved Selenium decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [52]
Progesterone DMUY35B Approved Progesterone decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [49]
Fluorouracil DMUM7HZ Approved Fluorouracil increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [53]
Isotretinoin DM4QTBN Approved Isotretinoin increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [54]
Testosterone enanthate DMB6871 Approved Testosterone enanthate affects the expression of Metalloproteinase inhibitor 3 (TIMP3). [55]
Nicotine DMWX5CO Approved Nicotine affects the expression of Metalloproteinase inhibitor 3 (TIMP3). [56]
Indomethacin DMSC4A7 Approved Indomethacin increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [53]
Capsaicin DMGMF6V Approved Capsaicin increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [57]
Rofecoxib DM3P5DA Approved Rofecoxib decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [58]
Isoproterenol DMK7MEY Approved Isoproterenol increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [59]
SNDX-275 DMH7W9X Phase 3 SNDX-275 increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [61]
Genistein DM0JETC Phase 2/3 Genistein decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [62]
Tocopherol DMBIJZ6 Phase 2 Tocopherol increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [63]
Belinostat DM6OC53 Phase 2 Belinostat decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [48]
DNCB DMDTVYC Phase 2 DNCB increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [64]
Tanespimycin DMNLQHK Phase 2 Tanespimycin increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [65]
ANW-32821 DMMJOZD Phase 2 ANW-32821 increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [66]
Benzo(a)pyrene DMN7J43 Phase 1 Benzo(a)pyrene decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [67]
(+)-JQ1 DM1CZSJ Phase 1 (+)-JQ1 decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [68]
Leflunomide DMR8ONJ Phase 1 Trial Leflunomide increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [69]
THAPSIGARGIN DMDMQIE Preclinical THAPSIGARGIN increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [70]
Trichostatin A DM9C8NX Investigative Trichostatin A decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [72]
Milchsaure DM462BT Investigative Milchsaure decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [73]
Coumestrol DM40TBU Investigative Coumestrol decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [74]
Glyphosate DM0AFY7 Investigative Glyphosate increases the expression of Metalloproteinase inhibitor 3 (TIMP3). [75]
Rapamycin Immunosuppressant Drug DM678IB Investigative Rapamycin Immunosuppressant Drug decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [76]
acrolein DMAMCSR Investigative acrolein decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [77]
4-[1-(4-hydroxyphenyl)-2-phenylbut-1-enyl]phenol DMTMLXU Investigative 4-[1-(4-hydroxyphenyl)-2-phenylbut-1-enyl]phenol decreases the expression of Metalloproteinase inhibitor 3 (TIMP3). [78]
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⏷ Show the Full List of 41 Drug(s)
1 Drug(s) Affected the Protein Interaction/Cellular Processes of This DOT
Drug Name Drug ID Highest Status Interaction REF
Pentosan polysulfate DM2HRKE Approved Pentosan polysulfate increases the secretion of Metalloproteinase inhibitor 3 (TIMP3). [60]
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References

1 ROC analysis of selected matrix metalloproteinases (MMPs) and tissue inhibitors of metalloproteinases (TIMPs) in psoriatic patients.Postepy Dermatol Alergol. 2018 Apr;35(2):167-173. doi: 10.5114/ada.2018.75238. Epub 2018 Apr 24.
2 The N-terminal p.(Ser38Cys) TIMP3 mutation underlying Sorsby fundus dystrophy is a founder mutation disrupting an intramolecular disulfide bond.Hum Mutat. 2019 May;40(5):539-551. doi: 10.1002/humu.23713. Epub 2019 Feb 6.
3 Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen). Genet Med. 2020 Feb;22(2):245-257. doi: 10.1038/s41436-019-0686-8. Epub 2019 Nov 6.
4 Increasing TIMP3 expression by hypomethylating agents diminishes soluble MICA, MICB and ULBP2 shedding in acute myeloid leukemia, facilitating NK cell-mediated immune recognition.Oncotarget. 2017 May 9;8(19):31959-31976. doi: 10.18632/oncotarget.16657.
5 Differential expressions of matrix metalloproteinases, a disintegrin and metalloproteinases, and a disintegrin and metalloproteinases with thrombospondin motifs and their endogenous inhibitors among histologic subtypes of lung cancers.Anticancer Agents Med Chem. 2012 Sep;12(7):744-52. doi: 10.2174/187152012802650156.
6 Strong association of tissue inhibitor of metalloproteinase (TIMP)-2 and -3 promoter single nucleotide polymorphisms with risk of colorectal cancer in ethnic Kashmiri population - a case control study.Biosci Rep. 2019 May 10;39(5):BSR20190478. doi: 10.1042/BSR20190478. Print 2019 May 31.
7 Downstream target genes of the neuropeptide S-NPSR1 pathway.Hum Mol Genet. 2006 Oct 1;15(19):2923-35. doi: 10.1093/hmg/ddl234. Epub 2006 Aug 22.
8 Genetic polymorphisms in matrix metalloproteinases (MMPs) and tissue inhibitors of MPs (TIMPs), and bladder cancer susceptibility.BJU Int. 2013 Dec;112(8):1207-14. doi: 10.1111/bju.12230. Epub 2013 Jul 2.
9 A novel tissue inhibitor of metalloproteinases-3 mutation reveals a common molecular phenotype in Sorsby's fundus dystrophy. J Biol Chem. 2000 Sep 1;275(35):27027-31. doi: 10.1074/jbc.M909677199.
10 miR-222-3p promotes osteosarcoma cell migration and invasion through targeting TIMP3.Onco Targets Ther. 2018 Dec 3;11:8643-8653. doi: 10.2147/OTT.S175745. eCollection 2018.
11 TIMP3 Promoter Methylation Represents an Epigenetic Marker of BRCA1ness Breast Cancer Tumours.Pathol Oncol Res. 2018 Oct;24(4):937-940. doi: 10.1007/s12253-018-0398-4. Epub 2018 Mar 9.
12 Molecular Characterization and In-Silico Analysis of the Tissue Inhibitor of Metalloproteinases-3 (TIMP-3) Gene of Canine Mammary Tumor.Comb Chem High Throughput Screen. 2017;20(6):539-546. doi: 10.2174/1386207320666170217150741.
13 Involvement of TACE in colon inflammation: a novel mechanism of regulation via SIRT-1 activation.Cytokine. 2014 Mar;66(1):30-9. doi: 10.1016/j.cyto.2013.12.010. Epub 2014 Jan 4.
14 Dysregulation of microRNA-181b and TIMP3 is functionally involved in the pathogenesis of diabetic nephropathy.J Cell Physiol. 2019 Aug;234(10):18963-18969. doi: 10.1002/jcp.28536. Epub 2019 Apr 1.
15 MiR-21 down-regulation suppresses cell growth, invasion and induces cell apoptosis by targeting FASL, TIMP3, and RECK genes in esophageal carcinoma.Dig Dis Sci. 2013 Jul;58(7):1863-70. doi: 10.1007/s10620-013-2612-2. Epub 2013 Mar 17.
16 Association Between Tissue Inhibitor of Metalloproteinase-3 Gene Methylation and Gastric Cancer Risk: A Meta-Analysis.Genet Test Mol Biomarkers. 2016 Aug;20(8):427-31. doi: 10.1089/gtmb.2015.0332. Epub 2016 Jun 17.
17 Impact of HPV infection on gene expression and methylation in oral cancer patients.J Med Microbiol. 2019 Mar;68(3):440-445. doi: 10.1099/jmm.0.000898. Epub 2019 Jan 9.
18 Timp3 deficiency affects the progression of DEN-related hepatocellular carcinoma during diet-induced obesity in mice.Acta Diabetol. 2019 Dec;56(12):1265-1274. doi: 10.1007/s00592-019-01382-x. Epub 2019 Jul 10.
19 Genetic and epigenetic alterations in meningiomas.Clin Neurol Neurosurg. 2017 Jul;158:119-125. doi: 10.1016/j.clineuro.2017.05.002. Epub 2017 May 3.
20 Loss of TIMP3 by promoter methylation of Sp1 binding site promotes oral cancer metastasis.Cell Death Dis. 2019 Oct 17;10(11):793. doi: 10.1038/s41419-019-2016-0.
21 Delivery of a matrix metalloproteinase-responsive hydrogel releasing TIMP-3 after myocardial infarction: effects on left ventricular remodeling.Am J Physiol Heart Circ Physiol. 2018 Oct 1;315(4):H814-H825. doi: 10.1152/ajpheart.00076.2018. Epub 2018 Jul 6.
22 A Novel Approach to Detect Programed Death Ligand 1 (PD-L1) Status and Multiple Tumor Mutations Using a Single Non-Small-Cell Lung Cancer (NSCLC) Bronchoscopy Specimen.J Mol Diagn. 2019 Mar;21(2):186-197. doi: 10.1016/j.jmoldx.2018.10.001. Epub 2019 Feb 13.
23 Targeted Inhibition of Aggrecanases Prevents Articular Cartilage Degradation and Augments Bone Mass in the STR/Ort Mouse Model of Spontaneous Osteoarthritis.Arthritis Rheumatol. 2019 Apr;71(4):571-582. doi: 10.1002/art.40765. Epub 2019 Feb 14.
24 Gene and protein localisation of tumour necrosis factor (TNF)- converting enzyme in gingival tissues from periodontitis patients with drug-induced gingival overgrowth.Arch Oral Biol. 2013 Aug;58(8):1014-20. doi: 10.1016/j.archoralbio.2013.02.011. Epub 2013 Mar 16.
25 Correlations Between Sagittal Spinal Balance and Quality of Life in Rheumatoid Arthritis.Clin Spine Surg. 2017 May;30(4):E412-E417. doi: 10.1097/BSD.0000000000000246.
26 HPV-positive oropharyngeal squamous cell carcinoma is associated with TIMP3 and CADM1 promoter hypermethylation.Cancer Med. 2014 Oct;3(5):1185-96. doi: 10.1002/cam4.313. Epub 2014 Jul 26.
27 The Association of BRAF V600E Mutation With Tissue Inhibitor of Metalloproteinase-3 Expression and Clinicopathological Features in Papillary Thyroid Cancer.Int J Endocrinol Metab. 2018 Feb 10;16(2):e56120. doi: 10.5812/ijem.56120. eCollection 2018 Apr.
28 Methylated TIMP-3 DNA in body fluids is an independent prognostic factor for gastric cancer.Arch Pathol Lab Med. 2014 Nov;138(11):1466-73. doi: 10.5858/arpa.2013-0285-OA.
29 The deubiquitinase USP10 regulates KLF4 stability and suppresses lung tumorigenesis.Cell Death Differ. 2020 Jun;27(6):1747-1764. doi: 10.1038/s41418-019-0458-7. Epub 2019 Nov 20.
30 MiR-21 enhances melanoma invasiveness via inhibition of tissue inhibitor of metalloproteinases 3 expression: in vivo effects of MiR-21 inhibitor.PLoS One. 2015 Jan 14;10(1):e0115919. doi: 10.1371/journal.pone.0115919. eCollection 2015.
31 MicroRNA-181b Controls Atherosclerosis and Aneurysms Through Regulation of TIMP-3 and Elastin.Circ Res. 2017 Jan 6;120(1):49-65. doi: 10.1161/CIRCRESAHA.116.309321. Epub 2016 Oct 18.
32 Hypermethylation of genes detected in urine from Ghanaian adults with bladder pathology associated with Schistosoma haematobium infection.PLoS One. 2013;8(3):e59089. doi: 10.1371/journal.pone.0059089. Epub 2013 Mar 18.
33 Changes in miR-221/222 Levels in Invasive and In Situ Carcinomas of the Breast: Differences in Association with Estrogen Receptor and TIMP3 Expression Levels.Mol Diagn Ther. 2016 Dec;20(6):603-615. doi: 10.1007/s40291-016-0230-3.
34 MicroRNA-21 functions as an oncogene and promotes cell proliferation and invasion via TIMP3 in renal cancer.Eur Rev Med Pharmacol Sci. 2017 Oct;21(20):4566-4576.
35 The contrasting epigenetic role of RUNX3 when compared with that of MGMT and TIMP3 in glioblastoma multiforme clinical outcomes.J Neurol Sci. 2014 Dec 15;347(1-2):325-31. doi: 10.1016/j.jns.2014.10.043. Epub 2014 Nov 7.
36 Chemical genomic screening for methylation-silenced genes in gastric cancer cell lines using 5-aza-2'-deoxycytidine treatment and oligonucleotide microarray. Cancer Sci. 2006 Jan;97(1):64-71.
37 Inhibition of microRNA-222 up-regulates TIMP3 to promotes osteogenic differentiation of MSCs from fracture rats with type 2 diabetes mellitus.J Cell Mol Med. 2020 Jan;24(1):686-694. doi: 10.1111/jcmm.14777. Epub 2019 Nov 6.
38 Integrative omics data analyses of repeated dose toxicity of valproic acid in vitro reveal new mechanisms of steatosis induction. Toxicology. 2018 Jan 15;393:160-170.
39 Comparison of HepG2 and HepaRG by whole-genome gene expression analysis for the purpose of chemical hazard identification. Toxicol Sci. 2010 May;115(1):66-79.
40 Development of a neural teratogenicity test based on human embryonic stem cells: response to retinoic acid exposure. Toxicol Sci. 2011 Dec;124(2):370-7.
41 Gene expression data from acetaminophen-induced toxicity in human hepatic in vitro systems and clinical liver samples. Data Brief. 2016 Mar 26;7:1052-1057. doi: 10.1016/j.dib.2016.03.069. eCollection 2016 Jun.
42 Bringing in vitro analysis closer to in vivo: studying doxorubicin toxicity and associated mechanisms in 3D human microtissues with PBPK-based dose modelling. Toxicol Lett. 2018 Sep 15;294:184-192.
43 Physiological and toxicological transcriptome changes in HepG2 cells exposed to copper. Physiol Genomics. 2009 Aug 7;38(3):386-401.
44 Convergent transcriptional profiles induced by endogenous estrogen and distinct xenoestrogens in breast cancer cells. Carcinogenesis. 2006 Aug;27(8):1567-78.
45 Quantitative proteomics reveals a broad-spectrum antiviral property of ivermectin, benefiting for COVID-19 treatment. J Cell Physiol. 2021 Apr;236(4):2959-2975. doi: 10.1002/jcp.30055. Epub 2020 Sep 22.
46 Arsenic trioxide induces different gene expression profiles of genes related to growth and apoptosis in glioma cells dependent on the p53 status. Mol Biol Rep. 2008 Sep;35(3):421-9.
47 Large-scale in silico and microarray-based identification of direct 1,25-dihydroxyvitamin D3 target genes. Mol Endocrinol. 2005 Nov;19(11):2685-95.
48 A transcriptome-based classifier to identify developmental toxicants by stem cell testing: design, validation and optimization for histone deacetylase inhibitors. Arch Toxicol. 2015 Sep;89(9):1599-618.
49 Triclosan and bisphenol a affect decidualization of human endometrial stromal cells. Mol Cell Endocrinol. 2016 Feb 15;422:74-83. doi: 10.1016/j.mce.2015.11.017. Epub 2015 Nov 19.
50 Functional gene expression profile underlying methotrexate-induced senescence in human colon cancer cells. Tumour Biol. 2011 Oct;32(5):965-76.
51 Chemical genomic screening for methylation-silenced genes in gastric cancer cell lines using 5-aza-2'-deoxycytidine treatment and oligonucleotide microarray. Cancer Sci. 2006 Jan;97(1):64-71.
52 Inhibition of invasion and induction of apoptosis by selenium in human malignant brain tumour cells in vitro. Int J Oncol. 2007 May;30(5):1263-71.
53 Evaluation of developmental toxicity using undifferentiated human embryonic stem cells. J Appl Toxicol. 2015 Feb;35(2):205-18.
54 Temporal changes in gene expression in the skin of patients treated with isotretinoin provide insight into its mechanism of action. Dermatoendocrinol. 2009 May;1(3):177-87.
55 Transcriptional profiling of testosterone-regulated genes in the skeletal muscle of human immunodeficiency virus-infected men experiencing weight loss. J Clin Endocrinol Metab. 2007 Jul;92(7):2793-802. doi: 10.1210/jc.2006-2722. Epub 2007 Apr 17.
56 Effects of nicotine and lipopolysaccharide on the expression of matrix metalloproteinases, plasminogen activators, and their inhibitors in human osteoblasts. Arch Oral Biol. 2009 Feb;54(2):146-55.
57 Capsaicin promotes a more aggressive gene expression phenotype and invasiveness in null-TRPV1 urothelial cancer cells. Carcinogenesis. 2011 May;32(5):686-94. doi: 10.1093/carcin/bgr025. Epub 2011 Feb 10.
58 Rofecoxib regulates the expression of genes related to the matrix metalloproteinase pathway in humans: implication for the adverse effects of cyclooxygenase-2 inhibitors. Clin Pharmacol Ther. 2006 Apr;79(4):303-15. doi: 10.1016/j.clpt.2005.12.306.
59 Isoproterenol effects evaluated in heart slices of human and rat in comparison to rat heart in vivo. Toxicol Appl Pharmacol. 2014 Jan 15;274(2):302-12.
60 Pentosan polysulfate decreases proliferation and extracellular matrix deposition by vascular smooth muscle cells isolated from failed hemodialysis access grafts. Clin Nephrol. 2000 Aug;54(2):121-7.
61 Definition of transcriptome-based indices for quantitative characterization of chemically disturbed stem cell development: introduction of the STOP-Toxukn and STOP-Toxukk tests. Arch Toxicol. 2017 Feb;91(2):839-864.
62 Genistein suppresses the invasive potential of human breast cancer cells through transcriptional regulation of metalloproteinases and their tissue inhibitors. Int J Oncol. 2005 Apr;26(4):1101-9. doi: 10.3892/ijo.26.4.1101.
63 Selenium and vitamin E: cell type- and intervention-specific tissue effects in prostate cancer. J Natl Cancer Inst. 2009 Mar 4;101(5):306-20.
64 MIP-1beta, a novel biomarker for in vitro sensitization test using human monocytic cell line. Toxicol In Vitro. 2006 Aug;20(5):736-42.
65 Candidate therapeutic agents for hepatocellular cancer can be identified from phenotype-associated gene expression signatures. Cancer. 2009 Aug 15;115(16):3738-48. doi: 10.1002/cncr.24417.
66 Human Mincle Binds to Cholesterol Crystals and Triggers Innate Immune Responses. J Biol Chem. 2015 Oct 16;290(42):25322-32. doi: 10.1074/jbc.M115.645234. Epub 2015 Aug 20.
67 New insights into BaP-induced toxicity: role of major metabolites in transcriptomics and contribution to hepatocarcinogenesis. Arch Toxicol. 2016 Jun;90(6):1449-58.
68 The BET bromodomain inhibitor JQ1 suppresses growth of pancreatic ductal adenocarcinoma in patient-derived xenograft models. Oncogene. 2016 Feb 18;35(7):833-45.
69 Endoplasmic reticulum stress and MAPK signaling pathway activation underlie leflunomide-induced toxicity in HepG2 Cells. Toxicology. 2017 Dec 1;392:11-21.
70 Chemical stresses fail to mimic the unfolded protein response resulting from luminal load with unfolded polypeptides. J Biol Chem. 2018 Apr 13;293(15):5600-5612.
71 Oncogenic Potential of Bisphenol A and Common Environmental Contaminants in Human Mammary Epithelial Cells. Int J Mol Sci. 2020 May 25;21(10):3735. doi: 10.3390/ijms21103735.
72 From transient transcriptome responses to disturbed neurodevelopment: role of histone acetylation and methylation as epigenetic switch between reversible and irreversible drug effects. Arch Toxicol. 2014 Jul;88(7):1451-68.
73 Transcriptional profiling of lactic acid treated reconstructed human epidermis reveals pathways underlying stinging and itch. Toxicol In Vitro. 2019 Jun;57:164-173.
74 Pleiotropic combinatorial transcriptomes of human breast cancer cells exposed to mixtures of dietary phytoestrogens. Food Chem Toxicol. 2009 Apr;47(4):787-95.
75 Alteration of estrogen-regulated gene expression in human cells induced by the agricultural and horticultural herbicide glyphosate. Hum Exp Toxicol. 2007 Sep;26(9):747-52. doi: 10.1177/0960327107083453.
76 Cigarette smoke components induce matrix metalloproteinase-1 in aortic endothelial cells through inhibition of mTOR signaling. Toxicol Sci. 2011 Oct;123(2):542-9. doi: 10.1093/toxsci/kfr181. Epub 2011 Jul 8.
77 Metalloproteinases mediate mucin 5AC expression by epidermal growth factor receptor activation. Am J Respir Crit Care Med. 2005 Feb 15;171(4):305-14. doi: 10.1164/rccm.200408-1003OC. Epub 2004 Nov 5.
78 Molecular mechanism of action of bisphenol and bisphenol A mediated by oestrogen receptor alpha in growth and apoptosis of breast cancer cells. Br J Pharmacol. 2013 May;169(1):167-78.
79 DNA methylation and sensitivity to antimetabolites in cancer cell lines. Oncol Rep. 2008 Feb;19(2):407-12.